RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 CHIC2Q9UKJ5 165 aa15.6■□□□□ 0.09
CLCN4-204ENST00000454850 LOC105371045A0A1W2PR82 267 aa15.58■□□□□ 0.08
CLCN4-204ENST00000454850 COL16A1Q07092 1604 aaPredicted RBP15.57■□□□□ 0.08
CLCN4-204ENST00000454850 NOS1P29475 1434 aa15.57■□□□□ 0.08
CLCN4-204ENST00000454850 SLAIN2Q9P270 581 aa15.56■□□□□ 0.08
CLCN4-204ENST00000454850 ANKRD30AQ9BXX3 1397 aa15.56■□□□□ 0.08
CLCN4-204ENST00000454850 JCADQ9P266 1359 aa15.56■□□□□ 0.08
CLCN4-204ENST00000454850 FGD6Q6ZV73 1430 aa15.55■□□□□ 0.08
CLCN4-204ENST00000454850 PPP1R15AO75807 674 aaPredicted RBP15.53■□□□□ 0.08
CLCN4-204ENST00000454850 LRP6O75581 1613 aa15.53■□□□□ 0.08
CLCN4-204ENST00000454850 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.52■□□□□ 0.08
CLCN4-204ENST00000454850 MEX3CQ5U5Q3 659 aaKnown RBP15.52■□□□□ 0.08
CLCN4-204ENST00000454850 ZFYVE9O95405 1425 aa15.51■□□□□ 0.07
CLCN4-204ENST00000454850 RIMS2Q9UQ26 1411 aa15.51■□□□□ 0.07
CLCN4-204ENST00000454850 PLEKHG1Q9ULL1 1385 aa15.51■□□□□ 0.07
CLCN4-204ENST00000454850 SHPRHQ149N8 1683 aa15.51■□□□□ 0.07
CLCN4-204ENST00000454850 TMEM131LA2VDJ0 1609 aa15.51■□□□□ 0.07
CLCN4-204ENST00000454850 APLP2Q06481 763 aa15.51■□□□□ 0.07
CLCN4-204ENST00000454850 C14orf37Q86TY3 774 aa15.51■□□□□ 0.07
CLCN4-204ENST00000454850 SLC52A1Q9NWF4 448 aa15.51■□□□□ 0.07
CLCN4-204ENST00000454850 TRIM52Q96A61 297 aa15.49■□□□□ 0.07
CLCN4-204ENST00000454850 RPRD2Q5VT52 1461 aaKnown RBP15.48■□□□□ 0.07
CLCN4-204ENST00000454850 AHDC1Q5TGY3 1603 aaPredicted RBP15.47■□□□□ 0.07
CLCN4-204ENST00000454850 CHGAP10645 457 aaKnown RBP15.47■□□□□ 0.07
CLCN4-204ENST00000454850 NUTM2DQ5VT03 806 aaPredicted RBP15.47■□□□□ 0.07
CLCN4-204ENST00000454850 ADGRL2O95490 1459 aa15.46■□□□□ 0.07
CLCN4-204ENST00000454850 SPATA31A6Q5VVP1 1343 aa15.46■□□□□ 0.07
CLCN4-204ENST00000454850 E9PCH4 1651 aa15.45■□□□□ 0.06
CLCN4-204ENST00000454850 DIP2AQ14689 1571 aa15.45■□□□□ 0.06
CLCN4-204ENST00000454850 ANKRD50Q9ULJ7 1429 aa15.44■□□□□ 0.06
CLCN4-204ENST00000454850 HDGFP51858 240 aaKnown RBP15.44■□□□□ 0.06
CLCN4-204ENST00000454850 ZNF772Q68DY9 489 aaPredicted RBP15.44■□□□□ 0.06
CLCN4-204ENST00000454850 UPF1Q92900 1129 aaKnown RBP eCLIP15.44■□□□□ 0.06
CLCN4-204ENST00000454850 ATF3P18847 181 aa15.43■□□□□ 0.06
CLCN4-204ENST00000454850 FAM50AQ14320 339 aaKnown RBP15.43■□□□□ 0.06
CLCN4-204ENST00000454850 TBX22Q9Y458 520 aa15.43■□□□□ 0.06
CLCN4-204ENST00000454850 UNC13BO14795 1591 aa15.43■□□□□ 0.06
CLCN4-204ENST00000454850 ADAMTS13Q76LX8 1427 aa15.43■□□□□ 0.06
CLCN4-204ENST00000454850 NCOA3Q9Y6Q9 1424 aa15.43■□□□□ 0.06
CLCN4-204ENST00000454850 NUTM2BA6NNL0 878 aaPredicted RBP15.42■□□□□ 0.06
CLCN4-204ENST00000454850 NUTM2EB1AL46 878 aaPredicted RBP15.42■□□□□ 0.06
CLCN4-204ENST00000454850 CADPS2Q86UW7 1296 aa15.42■□□□□ 0.06
CLCN4-204ENST00000454850 NUTM2AQ8IVF1 878 aaPredicted RBP15.42■□□□□ 0.06
CLCN4-204ENST00000454850 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.41■□□□□ 0.06
CLCN4-204ENST00000454850 TRPM2O94759 1503 aa15.41■□□□□ 0.06
CLCN4-204ENST00000454850 C19orf44Q9H6X5 657 aa15.4■□□□□ 0.06
CLCN4-204ENST00000454850 RXRBP28702 533 aa15.39■□□□□ 0.05
CLCN4-204ENST00000454850 BRINP3Q76B58 766 aa15.38■□□□□ 0.05
CLCN4-204ENST00000454850 SRCAPQ6ZRS2 3230 aa15.38■□□□□ 0.05
CLCN4-204ENST00000454850 NHSL1Q5SYE7 1610 aa15.38■□□□□ 0.05
CLCN4-204ENST00000454850 ASXL1Q8IXJ9 1541 aa15.38■□□□□ 0.05
CLCN4-204ENST00000454850 PTPRUQ92729 1446 aa15.37■□□□□ 0.05
CLCN4-204ENST00000454850 IQGAP3Q86VI3 1631 aa15.37■□□□□ 0.05
CLCN4-204ENST00000454850 XRN1Q8IZH2 1706 aaKnown RBP15.37■□□□□ 0.05
CLCN4-204ENST00000454850 PIK3R4Q99570 1358 aa15.36■□□□□ 0.05
CLCN4-204ENST00000454850 AMOTL2Q9Y2J4 779 aa15.36■□□□□ 0.05
CLCN4-204ENST00000454850 AFF2P51816 1311 aa15.36■□□□□ 0.05
CLCN4-204ENST00000454850 NRXN3Q9Y4C0 1643 aa15.35■□□□□ 0.05
CLCN4-204ENST00000454850 CDK12Q9NYV4 1490 aaPredicted RBP15.34■□□□□ 0.05
CLCN4-204ENST00000454850 SPHKAPQ2M3C7 1700 aa15.33■□□□□ 0.04
CLCN4-204ENST00000454850 DCCP43146 1447 aa15.33■□□□□ 0.04
CLCN4-204ENST00000454850 NALCNQ8IZF0 1738 aa15.32■□□□□ 0.04
CLCN4-204ENST00000454850 RGS12O14924 1447 aa15.32■□□□□ 0.04
CLCN4-204ENST00000454850 MST1RQ04912 1400 aa15.32■□□□□ 0.04
CLCN4-204ENST00000454850 C8orf37Q96NL8 207 aa15.31■□□□□ 0.04
CLCN4-204ENST00000454850 SETD5Q9C0A6 1442 aa15.31■□□□□ 0.04
CLCN4-204ENST00000454850 SETBP1Q9Y6X0 1596 aa15.31■□□□□ 0.04
CLCN4-204ENST00000454850 DDX17Q92841 729 aaKnown RBP15.3■□□□□ 0.04
CLCN4-204ENST00000454850 NUP155O75694 1391 aa15.28■□□□□ 0.04
CLCN4-204ENST00000454850 PNPLA6Q8IY17 1366 aa15.27■□□□□ 0.04
CLCN4-204ENST00000454850 ZNF326Q5BKZ1 582 aaKnown RBP15.27■□□□□ 0.04
CLCN4-204ENST00000454850 LRRC59Q96AG4 307 aaKnown RBP15.27■□□□□ 0.04
CLCN4-204ENST00000454850 QTRT2Q9H974 415 aaKnown RBP15.27■□□□□ 0.04
CLCN4-204ENST00000454850 METP08581 1390 aa15.26■□□□□ 0.03
CLCN4-204ENST00000454850 RBM6P78332 1123 aaKnown RBP15.26■□□□□ 0.03
CLCN4-204ENST00000454850 EP400Q96L91 3159 aa15.26■□□□□ 0.03
CLCN4-204ENST00000454850 ADGRL3Q9HAR2 1447 aa15.26■□□□□ 0.03
CLCN4-204ENST00000454850 ADAMTS2O95450 1211 aa15.25■□□□□ 0.03
CLCN4-204ENST00000454850 ROCK1Q13464 1354 aa15.24■□□□□ 0.03
CLCN4-204ENST00000454850 KIF1BO60333 1816 aa15.24■□□□□ 0.03
CLCN4-204ENST00000454850 ITGAEP38570 1179 aa15.24■□□□□ 0.03
CLCN4-204ENST00000454850 NGLY1Q96IV0 654 aa15.23■□□□□ 0.03
CLCN4-204ENST00000454850 CLTCL1P53675 1640 aa15.23■□□□□ 0.03
CLCN4-204ENST00000454850 NEXMIFQ5QGS0 1516 aa15.22■□□□□ 0.03
CLCN4-204ENST00000454850 LAMC1P11047 1609 aa15.21■□□□□ 0.02
CLCN4-204ENST00000454850 C1orf167Q5SNV9 1468 aa15.2■□□□□ 0.02
CLCN4-204ENST00000454850 ATAD2Q6PL18 1390 aa15.2■□□□□ 0.02
CLCN4-204ENST00000454850 MARF1Q9Y4F3 1742 aaKnown RBP15.18■□□□□ 0.02
CLCN4-204ENST00000454850 USP21Q9UK80 565 aa15.17■□□□□ 0.02
CLCN4-204ENST00000454850 ORAI2Q96SN7 254 aa15.16■□□□□ 0.02
CLCN4-204ENST00000454850 COL22A1Q8NFW1 1626 aaPredicted RBP15.16■□□□□ 0.02
CLCN4-204ENST00000454850 TRPC5Q9UL62 973 aaPredicted RBP15.15■□□□□ 0.02
CLCN4-204ENST00000454850 PTCH1Q13635 1447 aa15.14■□□□□ 0.01
CLCN4-204ENST00000454850 ROBO2Q9HCK4 1378 aa15.13■□□□□ 0.01
CLCN4-204ENST00000454850 ATRNO75882 1429 aa15.13■□□□□ 0.01
CLCN4-204ENST00000454850 SOS2Q07890 1332 aaPredicted RBP15.13■□□□□ 0.01
CLCN4-204ENST00000454850 PPLO60437 1756 aa15.12■□□□□ 0.01
CLCN4-204ENST00000454850 ZRANB1Q9UGI0 708 aa15.12■□□□□ 0.01
CLCN4-204ENST00000454850 PPARGC1BQ86YN6 1023 aaKnown RBP15.1■□□□□ 0.01
CLCN4-204ENST00000454850 FNBP4Q8N3X1 1017 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms