RNA–Protein interactions for RNA: ENST00000454141.5

SEC22C-212, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-212ENST00000454141 RIMS2Q9UQ26 1411 aa27.91■■■□□ 2.06
SEC22C-212ENST00000454141 KCNA6P17658 529 aa27.9■■■□□ 2.06
SEC22C-212ENST00000454141 PLEKHG1Q9ULL1 1385 aa27.89■■■□□ 2.06
SEC22C-212ENST00000454141 BCANQ96GW7 911 aa27.88■■■□□ 2.05
SEC22C-212ENST00000454141 XIRP1Q702N8 1843 aaKnown RBP27.88■■■□□ 2.05
SEC22C-212ENST00000454141 MYO5BQ9ULV0 1848 aa27.88■■■□□ 2.05
SEC22C-212ENST00000454141 PPP1R15AO75807 674 aaPredicted RBP27.87■■■□□ 2.05
SEC22C-212ENST00000454141 CHGAP10645 457 aaKnown RBP27.87■■■□□ 2.05
SEC22C-212ENST00000454141 HDGFP51858 240 aaKnown RBP27.87■■■□□ 2.05
SEC22C-212ENST00000454141 TMEM94Q12767 1356 aa27.86■■■□□ 2.05
SEC22C-212ENST00000454141 NWD1Q149M9 1564 aa27.86■■■□□ 2.05
SEC22C-212ENST00000454141 NKTRP30414 1462 aaKnown RBP27.86■■■□□ 2.05
SEC22C-212ENST00000454141 MED1Q15648 1581 aaPredicted RBP27.82■■■□□ 2.04
SEC22C-212ENST00000454141 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.82■■■□□ 2.04
SEC22C-212ENST00000454141 SENP3Q9H4L4 574 aaPredicted RBP27.82■■■□□ 2.04
SEC22C-212ENST00000454141 PROSER2Q86WR7 435 aaPredicted RBP27.81■■■□□ 2.04
SEC22C-212ENST00000454141 NAIPQ13075 1403 aa27.78■■■□□ 2.04
SEC22C-212ENST00000454141 SOCS7O14512 581 aa27.76■■■□□ 2.03
SEC22C-212ENST00000454141 RBM33Q96EV2 1170 aaKnown RBP27.76■■■□□ 2.03
SEC22C-212ENST00000454141 TBX22Q9Y458 520 aa27.75■■■□□ 2.03
SEC22C-212ENST00000454141 SPHKAPQ2M3C7 1700 aa27.75■■■□□ 2.03
SEC22C-212ENST00000454141 DIP2AQ14689 1571 aa27.74■■■□□ 2.03
SEC22C-212ENST00000454141 NUTM2DQ5VT03 806 aaPredicted RBP27.74■■■□□ 2.03
SEC22C-212ENST00000454141 FAM135BQ49AJ0 1406 aa27.74■■■□□ 2.03
SEC22C-212ENST00000454141 ADAMTS13Q76LX8 1427 aa27.74■■■□□ 2.03
SEC22C-212ENST00000454141 CHD2O14647 1828 aaKnown RBP27.71■■■□□ 2.03
SEC22C-212ENST00000454141 MSH6P52701 1360 aa27.71■■■□□ 2.03
SEC22C-212ENST00000454141 HFM1A2PYH4 1435 aa27.69■■■□□ 2.02
SEC22C-212ENST00000454141 PIK3R4Q99570 1358 aa27.68■■■□□ 2.02
SEC22C-212ENST00000454141 TRPM2O94759 1503 aa27.67■■■□□ 2.02
SEC22C-212ENST00000454141 ROBO1Q9Y6N7 1651 aa27.65■■■□□ 2.02
SEC22C-212ENST00000454141 NCOA3Q9Y6Q9 1424 aa27.64■■■□□ 2.02
SEC22C-212ENST00000454141 CLTCL1P53675 1640 aa27.63■■■□□ 2.01
SEC22C-212ENST00000454141 ZNF326Q5BKZ1 582 aaKnown RBP27.62■■■□□ 2.01
SEC22C-212ENST00000454141 PHF23Q9BUL5 403 aaPredicted RBP27.62■■■□□ 2.01
SEC22C-212ENST00000454141 SETBP1Q9Y6X0 1596 aa27.6■■■□□ 2.01
SEC22C-212ENST00000454141 TRIM52Q96A61 297 aa27.6■■■□□ 2.01
SEC22C-212ENST00000454141 NRXN3Q9Y4C0 1643 aa27.59■■■□□ 2.01
SEC22C-212ENST00000454141 SLAIN2Q9P270 581 aa27.58■■■□□ 2.01
SEC22C-212ENST00000454141 PTPRUQ92729 1446 aa27.58■■■□□ 2
SEC22C-212ENST00000454141 C14orf37Q86TY3 774 aa27.57■■■□□ 2
SEC22C-212ENST00000454141 NEXMIFQ5QGS0 1516 aa27.57■■■□□ 2
SEC22C-212ENST00000454141 AMOTL2Q9Y2J4 779 aa27.55■■■□□ 2
SEC22C-212ENST00000454141 SLC4A1APQ9BWU0 796 aaKnown RBP27.53■■■□□ 2
SEC22C-212ENST00000454141 XRN1Q8IZH2 1706 aaKnown RBP27.52■■■□□ 2
SEC22C-212ENST00000454141 C19orf44Q9H6X5 657 aa27.51■■□□□ 1.99
SEC22C-212ENST00000454141 CADPS2Q86UW7 1296 aa27.5■■□□□ 1.99
SEC22C-212ENST00000454141 KIF1BO60333 1816 aa27.5■■□□□ 1.99
SEC22C-212ENST00000454141 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.5■■□□□ 1.99
SEC22C-212ENST00000454141 METP08581 1390 aa27.48■■□□□ 1.99
SEC22C-212ENST00000454141 ATF3P18847 181 aa27.48■■□□□ 1.99
SEC22C-212ENST00000454141 PHLPP1O60346 1717 aa27.47■■□□□ 1.99
SEC22C-212ENST00000454141 DCCP43146 1447 aa27.45■■□□□ 1.98
SEC22C-212ENST00000454141 COL16A1Q07092 1604 aaPredicted RBP27.41■■□□□ 1.98
SEC22C-212ENST00000454141 JCADQ9P266 1359 aa27.41■■□□□ 1.98
SEC22C-212ENST00000454141 VGFO15240 615 aaPredicted RBP27.41■■□□□ 1.98
SEC22C-212ENST00000454141 RGS17Q9UGC6 210 aaPredicted RBP27.4■■□□□ 1.98
SEC22C-212ENST00000454141 RPGRIP1LQ68CZ1 1315 aa27.4■■□□□ 1.98
SEC22C-212ENST00000454141 AHDC1Q5TGY3 1603 aaPredicted RBP27.38■■□□□ 1.97
SEC22C-212ENST00000454141 FOXD1Q16676 465 aa27.38■■□□□ 1.97
SEC22C-212ENST00000454141 ADGRL3Q9HAR2 1447 aa27.36■■□□□ 1.97
SEC22C-212ENST00000454141 CCDC144AA2RUR9 1427 aa27.34■■□□□ 1.97
SEC22C-212ENST00000454141 SETD1AO15047 1707 aaKnown RBP27.34■■□□□ 1.97
SEC22C-212ENST00000454141 BRINP3Q76B58 766 aa27.34■■□□□ 1.97
SEC22C-212ENST00000454141 MST1RQ04912 1400 aa27.33■■□□□ 1.97
SEC22C-212ENST00000454141 PTCH1Q13635 1447 aa27.33■■□□□ 1.96
SEC22C-212ENST00000454141 PPLO60437 1756 aa27.32■■□□□ 1.96
SEC22C-212ENST00000454141 MPHOSPH9Q99550 1183 aa27.32■■□□□ 1.96
SEC22C-212ENST00000454141 ASXL1Q8IXJ9 1541 aa27.31■■□□□ 1.96
SEC22C-212ENST00000454141 NALCNQ8IZF0 1738 aa27.31■■□□□ 1.96
SEC22C-212ENST00000454141 PRAG1Q86YV5 1406 aa27.3■■□□□ 1.96
SEC22C-212ENST00000454141 SPATA31E1Q6ZUB1 1445 aa27.27■■□□□ 1.96
SEC22C-212ENST00000454141 ROBO2Q9HCK4 1378 aa27.27■■□□□ 1.96
SEC22C-212ENST00000454141 SPATA31A6Q5VVP1 1343 aa27.27■■□□□ 1.96
SEC22C-212ENST00000454141 ACIN1Q9UKV3 1341 aaKnown RBP27.26■■□□□ 1.95
SEC22C-212ENST00000454141 SETD5Q9C0A6 1442 aa27.25■■□□□ 1.95
SEC22C-212ENST00000454141 SHPRHQ149N8 1683 aa27.25■■□□□ 1.95
SEC22C-212ENST00000454141 POTEAQ6S8J7 498 aa27.25■■□□□ 1.95
SEC22C-212ENST00000454141 LRP6O75581 1613 aa27.24■■□□□ 1.95
SEC22C-212ENST00000454141 RGL3Q3MIN7 710 aa27.23■■□□□ 1.95
SEC22C-212ENST00000454141 NHSL1Q5SYE7 1610 aa27.23■■□□□ 1.95
SEC22C-212ENST00000454141 ADGRF5Q8IZF2 1346 aa27.22■■□□□ 1.95
SEC22C-212ENST00000454141 ANKRD30BQ9BXX2 1392 aa27.22■■□□□ 1.95
SEC22C-212ENST00000454141 C1orf167Q5SNV9 1468 aa27.19■■□□□ 1.94
SEC22C-212ENST00000454141 IFT172Q9UG01 1749 aa27.19■■□□□ 1.94
SEC22C-212ENST00000454141 MEX3CQ5U5Q3 659 aaKnown RBP27.17■■□□□ 1.94
SEC22C-212ENST00000454141 RAB3GAP2Q9H2M9 1393 aa27.16■■□□□ 1.94
SEC22C-212ENST00000454141 PIK3C2GO75747 1445 aa27.15■■□□□ 1.94
SEC22C-212ENST00000454141 DDX17Q92841 729 aaKnown RBP27.13■■□□□ 1.93
SEC22C-212ENST00000454141 LRRC59Q96AG4 307 aaKnown RBP27.13■■□□□ 1.93
SEC22C-212ENST00000454141 TECPR2O15040 1411 aa27.12■■□□□ 1.93
SEC22C-212ENST00000454141 LRPPRCP42704 1394 aaKnown RBP27.1■■□□□ 1.93
SEC22C-212ENST00000454141 CDC42BPGQ6DT37 1551 aa27.1■■□□□ 1.93
SEC22C-212ENST00000454141 NUTM2BA6NNL0 878 aaPredicted RBP27.1■■□□□ 1.93
SEC22C-212ENST00000454141 NUTM2EB1AL46 878 aaPredicted RBP27.1■■□□□ 1.93
SEC22C-212ENST00000454141 NUTM2AQ8IVF1 878 aaPredicted RBP27.1■■□□□ 1.93
SEC22C-212ENST00000454141 LAMC1P11047 1609 aa27.09■■□□□ 1.93
SEC22C-212ENST00000454141 PNPLA6Q8IY17 1366 aa27.09■■□□□ 1.93
SEC22C-212ENST00000454141 ZNF772Q68DY9 489 aaPredicted RBP27.08■■□□□ 1.93
SEC22C-212ENST00000454141 ORAI2Q96SN7 254 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms