RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 DMRT2Q9Y5R5 561 aa17.51■□□□□ 0.39
UBE2D3-210ENST00000453744 MCM4P33991 863 aa17.5■□□□□ 0.39
UBE2D3-210ENST00000453744 PDE3AQ14432 1141 aa17.5■□□□□ 0.39
UBE2D3-210ENST00000453744 GPATCH8Q9UKJ3 1502 aaKnown RBP17.5■□□□□ 0.39
UBE2D3-210ENST00000453744 TPRNQ4KMQ1 711 aa17.5■□□□□ 0.39
UBE2D3-210ENST00000453744 PLPPR3Q6T4P5 718 aa17.5■□□□□ 0.39
UBE2D3-210ENST00000453744 TCP11L2Q8N4U5 519 aa17.5■□□□□ 0.39
UBE2D3-210ENST00000453744 TRAK1Q9UPV9 953 aa17.5■□□□□ 0.39
UBE2D3-210ENST00000453744 GOLGA6L22H0YM25 854 aa17.49■□□□□ 0.39
UBE2D3-210ENST00000453744 NUP153P49790 1475 aaKnown RBP17.49■□□□□ 0.39
UBE2D3-210ENST00000453744 ARHGEF11O15085 1522 aa17.48■□□□□ 0.39
UBE2D3-210ENST00000453744 XRCC6P12956 609 aaKnown RBP eCLIP17.47■□□□□ 0.394e-17■□□□□ 10.6
UBE2D3-210ENST00000453744 WWC1Q8IX03 1113 aa17.47■□□□□ 0.39
UBE2D3-210ENST00000453744 KIAA0586Q9BVV6 1533 aa17.47■□□□□ 0.39
UBE2D3-210ENST00000453744 CFAP70Q5T0N1 1121 aa17.47■□□□□ 0.39
UBE2D3-210ENST00000453744 LAMC3Q9Y6N6 1575 aa17.47■□□□□ 0.39
UBE2D3-210ENST00000453744 PCDHB15Q9Y5E8 787 aa17.47■□□□□ 0.39
UBE2D3-210ENST00000453744 AMER1Q5JTC6 1135 aaPredicted RBP17.46■□□□□ 0.39
UBE2D3-210ENST00000453744 KDM5CP41229 1560 aa17.46■□□□□ 0.39
UBE2D3-210ENST00000453744 LNPKQ9C0E8 428 aa17.46■□□□□ 0.39
UBE2D3-210ENST00000453744 EIF3AQ14152 1382 aaKnown RBP17.46■□□□□ 0.38
UBE2D3-210ENST00000453744 NUTM2DQ5VT03 806 aaPredicted RBP17.45■□□□□ 0.38
UBE2D3-210ENST00000453744 ZKSCAN2Q63HK3 967 aa17.45■□□□□ 0.38
UBE2D3-210ENST00000453744 DNMT1P26358 1616 aaKnown RBP17.45■□□□□ 0.38
UBE2D3-210ENST00000453744 GBP4Q96PP9 640 aa17.45■□□□□ 0.38
UBE2D3-210ENST00000453744 TSR2Q969E8 191 aaKnown RBP17.45■□□□□ 0.38
UBE2D3-210ENST00000453744 WDR62O43379 1518 aa17.44■□□□□ 0.38
UBE2D3-210ENST00000453744 UHRF1BP1Q6BDS2 1440 aa17.44■□□□□ 0.38
UBE2D3-210ENST00000453744 DZIP1LQ8IYY4 767 aaKnown RBP17.44■□□□□ 0.38
UBE2D3-210ENST00000453744 RSPH4AQ5TD94 716 aa17.44■□□□□ 0.38
UBE2D3-210ENST00000453744 PRAG1Q86YV5 1406 aa17.43■□□□□ 0.38
UBE2D3-210ENST00000453744 LRRIQ1Q96JM4 1722 aa17.43■□□□□ 0.38
UBE2D3-210ENST00000453744 KIF14Q15058 1648 aa17.43■□□□□ 0.38
UBE2D3-210ENST00000453744 NKTRP30414 1462 aaKnown RBP17.43■□□□□ 0.38
UBE2D3-210ENST00000453744 DDX11L8A8MPP1 907 aa17.43■□□□□ 0.38
UBE2D3-210ENST00000453744 APBB1O00213 710 aa17.42■□□□□ 0.38
UBE2D3-210ENST00000453744 MRE11P49959 708 aa17.42■□□□□ 0.38
UBE2D3-210ENST00000453744 RLBP1P12271 317 aa17.42■□□□□ 0.38
UBE2D3-210ENST00000453744 KIF3BO15066 747 aa17.42■□□□□ 0.38
UBE2D3-210ENST00000453744 MSNP26038 577 aaKnown RBP17.42■□□□□ 0.38
UBE2D3-210ENST00000453744 RUNDC1Q96C34 613 aa17.42■□□□□ 0.38
UBE2D3-210ENST00000453744 PKNOX2Q96KN3 472 aa17.42■□□□□ 0.38
UBE2D3-210ENST00000453744 MTHFSP49914 203 aa17.41■□□□□ 0.38
UBE2D3-210ENST00000453744 RARSP54136 660 aaKnown RBP17.41■□□□□ 0.38
UBE2D3-210ENST00000453744 ELL2O00472 640 aaPredicted RBP17.4■□□□□ 0.38
UBE2D3-210ENST00000453744 TBC1D32Q96NH3 1257 aa17.4■□□□□ 0.38
UBE2D3-210ENST00000453744 PLEKHH2Q8IVE3 1493 aa17.4■□□□□ 0.38
UBE2D3-210ENST00000453744 SLC12A5Q9H2X9 1139 aa17.4■□□□□ 0.38
UBE2D3-210ENST00000453744 GRPEL1Q9HAV7 217 aa17.4■□□□□ 0.38
UBE2D3-210ENST00000453744 MBD5Q9P267 1494 aa17.39■□□□□ 0.37
UBE2D3-210ENST00000453744 ANKRD45Q5TZF3 282 aa17.39■□□□□ 0.37
UBE2D3-210ENST00000453744 BLMP54132 1417 aaPredicted RBP17.39■□□□□ 0.37
UBE2D3-210ENST00000453744 DDX49Q9Y6V7 483 aaKnown RBP17.38■□□□□ 0.37
UBE2D3-210ENST00000453744 ESPNB1AK53 854 aa17.38■□□□□ 0.37
UBE2D3-210ENST00000453744 FOXD4L5Q5VV16 416 aaPredicted RBP17.38■□□□□ 0.37
UBE2D3-210ENST00000453744 FOXD4L4Q8WXT5 416 aaPredicted RBP17.38■□□□□ 0.37
UBE2D3-210ENST00000453744 ZNF608Q9ULD9 1512 aaPredicted RBP17.37■□□□□ 0.37
UBE2D3-210ENST00000453744 ABCA5Q8WWZ7 1642 aa17.37■□□□□ 0.37
UBE2D3-210ENST00000453744 STK26Q9P289 416 aa17.37■□□□□ 0.37
UBE2D3-210ENST00000453744 EXOSC9Q06265 439 aaKnown RBP17.36■□□□□ 0.37
UBE2D3-210ENST00000453744 ZMYM4Q5VZL5 1548 aa17.36■□□□□ 0.37
UBE2D3-210ENST00000453744 EFCAB2Q5VUJ9 269 aa17.36■□□□□ 0.37
UBE2D3-210ENST00000453744 TMEM132EQ6IEE7 984 aa17.35■□□□□ 0.37
UBE2D3-210ENST00000453744 PTMAP06454 111 aaKnown RBP17.35■□□□□ 0.37
UBE2D3-210ENST00000453744 PTPRGP23470 1445 aa17.35■□□□□ 0.37
UBE2D3-210ENST00000453744 SRPK2P78362 688 aaKnown RBP17.34■□□□□ 0.37
UBE2D3-210ENST00000453744 SPAG9O60271 1321 aaKnown RBP17.34■□□□□ 0.37
UBE2D3-210ENST00000453744 USP19O94966 1318 aa17.34■□□□□ 0.37
UBE2D3-210ENST00000453744 MVPQ14764 893 aaKnown RBP17.34■□□□□ 0.37
UBE2D3-210ENST00000453744 AFAP1Q8N556 730 aa17.34■□□□□ 0.37
UBE2D3-210ENST00000453744 COL17A1Q9UMD9 1497 aaPredicted RBP17.33■□□□□ 0.37
UBE2D3-210ENST00000453744 DNTTIP2Q5QJE6 756 aaKnown RBP17.33■□□□□ 0.36
UBE2D3-210ENST00000453744 C1orf115Q9H7X2 142 aa17.33■□□□□ 0.36
UBE2D3-210ENST00000453744 SLC24A1O60721 1099 aa17.32■□□□□ 0.36
UBE2D3-210ENST00000453744 DDX19BQ9UMR2 479 aa17.32■□□□□ 0.36
UBE2D3-210ENST00000453744 ARHGEF12Q9NZN5 1544 aa17.32■□□□□ 0.36
UBE2D3-210ENST00000453744 IPO8O15397 1037 aaKnown RBP17.32■□□□□ 0.36
UBE2D3-210ENST00000453744 RBM10P98175 930 aaKnown RBP17.31■□□□□ 0.36
UBE2D3-210ENST00000453744 NGEFQ8N5V2 710 aa17.31■□□□□ 0.36
UBE2D3-210ENST00000453744 ERCC6Q03468 1493 aa17.31■□□□□ 0.36
UBE2D3-210ENST00000453744 FAM13BQ9NYF5 915 aa17.31■□□□□ 0.36
UBE2D3-210ENST00000453744 MAGI1Q96QZ7 1491 aaPredicted RBP17.31■□□□□ 0.36
UBE2D3-210ENST00000453744 CALD1Q05682 793 aaKnown RBP17.3■□□□□ 0.36
UBE2D3-210ENST00000453744 GGT6Q6P531 493 aa17.3■□□□□ 0.36
UBE2D3-210ENST00000453744 NOB1Q9ULX3 412 aaKnown RBP17.3■□□□□ 0.36
UBE2D3-210ENST00000453744 RAPGEF6Q8TEU7 1601 aa17.3■□□□□ 0.36
UBE2D3-210ENST00000453744 ZMYND15Q9H091 742 aa17.3■□□□□ 0.36
UBE2D3-210ENST00000453744 ZNF521Q96K83 1311 aa17.29■□□□□ 0.36
UBE2D3-210ENST00000453744 A2MP01023 1474 aa17.29■□□□□ 0.36
UBE2D3-210ENST00000453744 FOXD4L6Q3SYB3 417 aaPredicted RBP17.29■□□□□ 0.36
UBE2D3-210ENST00000453744 FOXD4L3Q6VB84 417 aaPredicted RBP17.29■□□□□ 0.36
UBE2D3-210ENST00000453744 CARD14Q9BXL6 1004 aa17.29■□□□□ 0.36
UBE2D3-210ENST00000453744 CLCN1P35523 988 aa17.28■□□□□ 0.36
UBE2D3-210ENST00000453744 NASPP49321 788 aaPredicted RBP17.28■□□□□ 0.36
UBE2D3-210ENST00000453744 TNPO1Q92973 898 aaKnown RBP17.28■□□□□ 0.36
UBE2D3-210ENST00000453744 GGNBP2Q9H3C7 697 aa17.28■□□□□ 0.36
UBE2D3-210ENST00000453744 DISP1Q96F81 1524 aa17.28■□□□□ 0.36
UBE2D3-210ENST00000453744 KANK1Q14678 1352 aa17.27■□□□□ 0.36
UBE2D3-210ENST00000453744 RIPK4P57078 832 aa17.27■□□□□ 0.36
UBE2D3-210ENST00000453744 PLCB2Q00722 1185 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms