RNA–Protein interactions for RNA: ENST00000453551.6

PUF60-203, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 1 (best) BASIC

Gene PUF60, Length 1,842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-203ENST00000453551 NRXN1Q9ULB1 1477 aa28.44■■■□□ 2.14
PUF60-203ENST00000453551 MLH3Q9UHC1 1453 aa28.43■■■□□ 2.14
PUF60-203ENST00000453551 SLC24A1O60721 1099 aa28.43■■■□□ 2.14
PUF60-203ENST00000453551 NPC1L1Q9UHC9 1359 aa28.42■■■□□ 2.14
PUF60-203ENST00000453551 ABCA6Q8N139 1617 aa28.41■■■□□ 2.14
PUF60-203ENST00000453551 POGZQ7Z3K3 1410 aa28.41■■■□□ 2.14
PUF60-203ENST00000453551 FANCIQ9NVI1 1328 aa28.4■■■□□ 2.14
PUF60-203ENST00000453551 B4GALNT3Q6L9W6 998 aa28.39■■■□□ 2.14
PUF60-203ENST00000453551 MYOM1P52179 1685 aa28.39■■■□□ 2.13
PUF60-203ENST00000453551 ADGRB3O60242 1522 aa28.38■■■□□ 2.13
PUF60-203ENST00000453551 MYO3AQ8NEV4 1616 aa28.37■■■□□ 2.13
PUF60-203ENST00000453551 KDM5AP29375 1690 aaKnown RBP28.37■■■□□ 2.13
PUF60-203ENST00000453551 CC2D1BQ5T0F9 858 aaKnown RBP28.36■■■□□ 2.13
PUF60-203ENST00000453551 ASXL1Q8IXJ9 1541 aa28.36■■■□□ 2.13
PUF60-203ENST00000453551 NPM1P06748 294 aaKnown RBP eCLIP28.36■■■□□ 2.13
PUF60-203ENST00000453551 FRMPD1Q5SYB0 1578 aa28.36■■■□□ 2.13
PUF60-203ENST00000453551 HECW2Q9P2P5 1572 aa28.36■■■□□ 2.13
PUF60-203ENST00000453551 ANP32EQ9BTT0 268 aa28.35■■■□□ 2.13
PUF60-203ENST00000453551 CD109Q6YHK3 1445 aa28.35■■■□□ 2.13
PUF60-203ENST00000453551 UGGT1Q9NYU2 1555 aa28.35■■■□□ 2.13
PUF60-203ENST00000453551 MROH2AA6NES4 1674 aa28.34■■■□□ 2.13
PUF60-203ENST00000453551 OSCARQ8IYS5 282 aa28.34■■■□□ 2.13
PUF60-203ENST00000453551 SETBP1Q9Y6X0 1596 aa28.33■■■□□ 2.13
PUF60-203ENST00000453551 SBNO2Q9Y2G9 1366 aa28.32■■■□□ 2.12
PUF60-203ENST00000453551 AMER1Q5JTC6 1135 aaPredicted RBP28.32■■■□□ 2.12
PUF60-203ENST00000453551 MYT1LQ9UL68 1186 aa28.32■■■□□ 2.12
PUF60-203ENST00000453551 PIK3C2GO75747 1445 aa28.32■■■□□ 2.12
PUF60-203ENST00000453551 KNSTRNQ9Y448 316 aa28.31■■■□□ 2.12
PUF60-203ENST00000453551 NEO1Q92859 1461 aa28.29■■■□□ 2.12
PUF60-203ENST00000453551 RRP1P56182 461 aaKnown RBP28.29■■■□□ 2.12
PUF60-203ENST00000453551 ERVK-7P63135 1459 aa28.27■■■□□ 2.12
PUF60-203ENST00000453551 RCAN3Q9UKA8 241 aa28.26■■■□□ 2.11
PUF60-203ENST00000453551 PPP2R1AP30153 589 aa28.25■■■□□ 2.11
PUF60-203ENST00000453551 ADGRF5Q8IZF2 1346 aa28.24■■■□□ 2.11
PUF60-203ENST00000453551 NPATQ14207 1427 aa28.24■■■□□ 2.11
PUF60-203ENST00000453551 ABCC3O15438 1527 aa28.23■■■□□ 2.11
PUF60-203ENST00000453551 PPLO60437 1756 aa28.23■■■□□ 2.11
PUF60-203ENST00000453551 CCDC136Q96JN2 1154 aa28.22■■■□□ 2.11
PUF60-203ENST00000453551 CFAP70Q5T0N1 1121 aa28.22■■■□□ 2.11
PUF60-203ENST00000453551 RPGRIP1LQ68CZ1 1315 aa28.19■■■□□ 2.1
PUF60-203ENST00000453551 NOS1P29475 1434 aa28.18■■■□□ 2.1
PUF60-203ENST00000453551 CAMSAP1Q5T5Y3 1602 aa28.16■■■□□ 2.1
PUF60-203ENST00000453551 ZC3H13Q5T200 1668 aaKnown RBP28.16■■■□□ 2.1
PUF60-203ENST00000453551 SENP3-EIF4A1A0A087X0R7 540 aa28.15■■■□□ 2.1
PUF60-203ENST00000453551 PIK3C2BO00750 1634 aa28.15■■■□□ 2.1
PUF60-203ENST00000453551 ADGRB1O14514 1584 aa28.14■■■□□ 2.1
PUF60-203ENST00000453551 ADAMTS8Q9UP79 889 aa28.13■■■□□ 2.09
PUF60-203ENST00000453551 DIP2CQ9Y2E4 1556 aa28.13■■■□□ 2.09
PUF60-203ENST00000453551 ARHGAP31Q2M1Z3 1444 aa28.12■■■□□ 2.09
PUF60-203ENST00000453551 CDCA7LQ96GN5 454 aa28.11■■■□□ 2.09
PUF60-203ENST00000453551 WDR43Q15061 677 aaKnown RBP eCLIP28.11■■■□□ 2.09
PUF60-203ENST00000453551 C14orf93Q9H972 538 aaKnown RBP28.11■■■□□ 2.09
PUF60-203ENST00000453551 MSH5O43196 834 aa28.1■■■□□ 2.09
PUF60-203ENST00000453551 ZNF521Q96K83 1311 aa28.09■■■□□ 2.09
PUF60-203ENST00000453551 CENPJQ9HC77 1338 aaPredicted RBP28.08■■■□□ 2.09
PUF60-203ENST00000453551 RICTORQ6R327 1708 aa28.08■■■□□ 2.08
PUF60-203ENST00000453551 SALL2Q9Y467 1007 aaPredicted RBP28.07■■■□□ 2.08
PUF60-203ENST00000453551 QRICH2Q9H0J4 1663 aa28.06■■■□□ 2.08
PUF60-203ENST00000453551 SIGLEC1Q9BZZ2 1709 aa28.05■■■□□ 2.08
PUF60-203ENST00000453551 USP32Q8NFA0 1604 aa28.04■■■□□ 2.08
PUF60-203ENST00000453551 EXOC6Q8TAG9 804 aa28.04■■■□□ 2.08
PUF60-203ENST00000453551 PLEKHH1Q9ULM0 1364 aa28.04■■■□□ 2.08
PUF60-203ENST00000453551 GLI2P10070 1586 aa28.03■■■□□ 2.08
PUF60-203ENST00000453551 PUS7Q96PZ0 661 aaKnown RBP28.03■■■□□ 2.08
PUF60-203ENST00000453551 GGT6Q6P531 493 aa28.02■■■□□ 2.08
PUF60-203ENST00000453551 NGEFQ8N5V2 710 aa28.02■■■□□ 2.08
PUF60-203ENST00000453551 NEXMIFQ5QGS0 1516 aa28.01■■■□□ 2.08
PUF60-203ENST00000453551 CARD14Q9BXL6 1004 aa28.01■■■□□ 2.07
PUF60-203ENST00000453551 ZFYVE9O95405 1425 aa28■■■□□ 2.07
PUF60-203ENST00000453551 POLR3AO14802 1390 aaPredicted RBP27.99■■■□□ 2.07
PUF60-203ENST00000453551 DUSP27Q5VZP5 1158 aa27.97■■■□□ 2.07
PUF60-203ENST00000453551 CHGAP10645 457 aaKnown RBP27.96■■■□□ 2.07
PUF60-203ENST00000453551 GOLGA2Q08379 1002 aa27.95■■■□□ 2.06
PUF60-203ENST00000453551 TRMT2AQ8IZ69 625 aaKnown RBP27.94■■■□□ 2.06
PUF60-203ENST00000453551 ARHGEF28Q8N1W1 1705 aaKnown RBP27.93■■■□□ 2.06
PUF60-203ENST00000453551 TCERG1O14776 1098 aaKnown RBP27.92■■■□□ 2.06
PUF60-203ENST00000453551 VGFO15240 615 aaPredicted RBP27.92■■■□□ 2.06
PUF60-203ENST00000453551 RAPGEF3O95398 923 aa27.92■■■□□ 2.06
PUF60-203ENST00000453551 CFAP65Q6ZU64 1925 aaKnown RBP27.92■■■□□ 2.06
PUF60-203ENST00000453551 NSD3Q9BZ95 1437 aa27.9■■■□□ 2.06
PUF60-203ENST00000453551 SLFN5Q08AF3 891 aa27.9■■■□□ 2.06
PUF60-203ENST00000453551 TRAK1Q9UPV9 953 aa27.89■■■□□ 2.06
PUF60-203ENST00000453551 SLC52A1Q9NWF4 448 aa27.88■■■□□ 2.05
PUF60-203ENST00000453551 MS4A1P11836 297 aa27.87■■■□□ 2.05
PUF60-203ENST00000453551 TULP4Q9NRJ4 1543 aa27.86■■■□□ 2.05
PUF60-203ENST00000453551 SHPRHQ149N8 1683 aa27.86■■■□□ 2.05
PUF60-203ENST00000453551 PREX1Q8TCU6 1659 aa27.86■■■□□ 2.05
PUF60-203ENST00000453551 CRBNQ96SW2 442 aa27.85■■■□□ 2.05
PUF60-203ENST00000453551 YEATS2Q9ULM3 1422 aa27.85■■■□□ 2.05
PUF60-203ENST00000453551 NSD2O96028 1365 aa27.85■■■□□ 2.05
PUF60-203ENST00000453551 REREQ9P2R6 1566 aa27.83■■■□□ 2.05
PUF60-203ENST00000453551 NKTRP30414 1462 aaKnown RBP27.83■■■□□ 2.05
PUF60-203ENST00000453551 ERICH6Q7L0X2 663 aa27.83■■■□□ 2.05
PUF60-203ENST00000453551 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.83■■■□□ 2.05
PUF60-203ENST00000453551 TMEM131LA2VDJ0 1609 aa27.82■■■□□ 2.04
PUF60-203ENST00000453551 EVC2Q86UK5 1308 aa27.82■■■□□ 2.04
PUF60-203ENST00000453551 PLIN1O60240 522 aa27.81■■■□□ 2.04
PUF60-203ENST00000453551 NINLQ9Y2I6 1382 aa27.81■■■□□ 2.04
PUF60-203ENST00000453551 TMEM132EQ6IEE7 984 aa27.81■■■□□ 2.04
PUF60-203ENST00000453551 ANKRD36BQ8N2N9 1353 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms