RNA–Protein interactions for RNA: ENST00000453177.2

CLIC4P1-201, Transcript of chloride intracellular channel 4 pseudogene 1, humanhuman

BASIC

Gene CLIC4P1, Length 535 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4P1-201ENST00000453177 CLCN1P35523 988 aa11.77□□□□□ -0.53
CLIC4P1-201ENST00000453177 KCTD12Q96CX2 325 aaKnown RBP11.77□□□□□ -0.53
CLIC4P1-201ENST00000453177 LRCH3Q96II8 777 aa11.77□□□□□ -0.53
CLIC4P1-201ENST00000453177 DAXXQ9UER7 740 aaPredicted RBP11.77□□□□□ -0.53
CLIC4P1-201ENST00000453177 GPCPD1Q9NPB8 672 aa11.76□□□□□ -0.53
CLIC4P1-201ENST00000453177 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.76□□□□□ -0.53
CLIC4P1-201ENST00000453177 SOWAHBA6NEL2 793 aa11.74□□□□□ -0.53
CLIC4P1-201ENST00000453177 SLC4A3P48751 1232 aa11.74□□□□□ -0.53
CLIC4P1-201ENST00000453177 PARP9Q8IXQ6 854 aa11.74□□□□□ -0.53
CLIC4P1-201ENST00000453177 RNF40O75150 1001 aa11.73□□□□□ -0.53
CLIC4P1-201ENST00000453177 BCAMP50895 628 aa11.73□□□□□ -0.53
CLIC4P1-201ENST00000453177 SLF2Q8IX21 1173 aa11.73□□□□□ -0.53
CLIC4P1-201ENST00000453177 TMUB1Q9BVT8 246 aa11.73□□□□□ -0.53
CLIC4P1-201ENST00000453177 THSD4Q6ZMP0 1018 aa11.72□□□□□ -0.53
CLIC4P1-201ENST00000453177 RNF166Q96A37 237 aaPredicted RBP11.72□□□□□ -0.53
CLIC4P1-201ENST00000453177 REPIN1Q9BWE0 567 aaKnown RBP11.72□□□□□ -0.53
CLIC4P1-201ENST00000453177 DDX11L8A8MPP1 907 aa11.7□□□□□ -0.54
CLIC4P1-201ENST00000453177 GIGYF2Q6Y7W6 1299 aaKnown RBP11.7□□□□□ -0.54
CLIC4P1-201ENST00000453177 SULF1Q8IWU6 871 aa11.7□□□□□ -0.54
CLIC4P1-201ENST00000453177 MMRN1Q13201 1228 aa11.69□□□□□ -0.54
CLIC4P1-201ENST00000453177 FAM217BQ9NTX9 383 aaPredicted RBP11.69□□□□□ -0.54
CLIC4P1-201ENST00000453177 HPS5Q9UPZ3 1129 aa11.69□□□□□ -0.54
CLIC4P1-201ENST00000453177 NEUROD2Q15784 382 aa11.68□□□□□ -0.54
CLIC4P1-201ENST00000453177 GPBP1L1Q9HC44 474 aaPredicted RBP11.68□□□□□ -0.54
CLIC4P1-201ENST00000453177 BRPF1P55201 1214 aaPredicted RBP11.67□□□□□ -0.54
CLIC4P1-201ENST00000453177 RSPH4AQ5TD94 716 aa11.67□□□□□ -0.54
CLIC4P1-201ENST00000453177 TSR3Q9UJK0 312 aaKnown RBP11.67□□□□□ -0.54
CLIC4P1-201ENST00000453177 SSTR3P32745 418 aaPredicted RBP11.66□□□□□ -0.54
CLIC4P1-201ENST00000453177 PPP4CP60510 307 aa11.66□□□□□ -0.54
CLIC4P1-201ENST00000453177 RDH13Q8NBN7 331 aa11.66□□□□□ -0.54
CLIC4P1-201ENST00000453177 NECTIN2Q92692 538 aa11.66□□□□□ -0.54
CLIC4P1-201ENST00000453177 SLC10A3P09131 477 aa11.65□□□□□ -0.54
CLIC4P1-201ENST00000453177 KDM4CQ9H3R0 1056 aa11.65□□□□□ -0.54
CLIC4P1-201ENST00000453177 PTPN5P54829 565 aa11.64□□□□□ -0.55
CLIC4P1-201ENST00000453177 MS4A1P11836 297 aa11.63□□□□□ -0.55
CLIC4P1-201ENST00000453177 CD46P15529 392 aa11.63□□□□□ -0.55
CLIC4P1-201ENST00000453177 WBP1LQ9NX94 342 aa11.63□□□□□ -0.55
CLIC4P1-201ENST00000453177 CFHP08603 1231 aa11.61□□□□□ -0.55
CLIC4P1-201ENST00000453177 HCSTQ9UBK5 93 aa11.6□□□□□ -0.55
CLIC4P1-201ENST00000453177 BEGAINQ9BUH8 593 aa11.59□□□□□ -0.55
CLIC4P1-201ENST00000453177 GCGRP47871 477 aa11.58□□□□□ -0.56
CLIC4P1-201ENST00000453177 KMT5BQ4FZB7 885 aa11.58□□□□□ -0.56
CLIC4P1-201ENST00000453177 APLP1P51693 650 aa11.57□□□□□ -0.56
CLIC4P1-201ENST00000453177 NYAP1Q6ZVC0 841 aa11.57□□□□□ -0.56
CLIC4P1-201ENST00000453177 PRR14Q9BWN1 585 aa11.57□□□□□ -0.56
CLIC4P1-201ENST00000453177 FAM117AQ9C073 453 aa11.55□□□□□ -0.56
CLIC4P1-201ENST00000453177 ACTN4O43707 911 aaKnown RBP11.53□□□□□ -0.56
CLIC4P1-201ENST00000453177 KDM4AO75164 1064 aa11.53□□□□□ -0.56
CLIC4P1-201ENST00000453177 NUTM1Q86Y26 1132 aa11.53□□□□□ -0.56
CLIC4P1-201ENST00000453177 DDRGK1Q96HY6 314 aa11.53□□□□□ -0.56
CLIC4P1-201ENST00000453177 FUT2Q10981 343 aa11.51□□□□□ -0.57
CLIC4P1-201ENST00000453177 PLSCR2Q9NRY7 297 aa11.51□□□□□ -0.57
CLIC4P1-201ENST00000453177 USP46P62068 366 aa11.49□□□□□ -0.57
CLIC4P1-201ENST00000453177 IL27Q8NEV9 243 aa11.49□□□□□ -0.57
CLIC4P1-201ENST00000453177 SPIRE2Q8WWL2 714 aa11.49□□□□□ -0.57
CLIC4P1-201ENST00000453177 TBC1D2Q9BYX2 928 aa11.49□□□□□ -0.57
CLIC4P1-201ENST00000453177 PCDHB3Q9Y5E6 796 aa11.49□□□□□ -0.57
CLIC4P1-201ENST00000453177 PLEKHG3A1L390 1219 aa11.48□□□□□ -0.57
CLIC4P1-201ENST00000453177 ATP6V1AP38606 617 aa11.47□□□□□ -0.57
CLIC4P1-201ENST00000453177 DIXDC1Q155Q3 683 aa11.47□□□□□ -0.57
CLIC4P1-201ENST00000453177 GRIPAP1Q4V328 841 aa11.47□□□□□ -0.57
CLIC4P1-201ENST00000453177 PUS10Q3MIT2 529 aaKnown RBP11.46□□□□□ -0.57
CLIC4P1-201ENST00000453177 HOXA2O43364 376 aa11.45□□□□□ -0.58
CLIC4P1-201ENST00000453177 COPS2P61201 443 aa11.44□□□□□ -0.58
CLIC4P1-201ENST00000453177 MORN1Q5T089 497 aa11.44□□□□□ -0.58
CLIC4P1-201ENST00000453177 BLOC1S3Q6QNY0 202 aa11.44□□□□□ -0.58
CLIC4P1-201ENST00000453177 RSPH6AQ9H0K4 717 aa11.44□□□□□ -0.58
CLIC4P1-201ENST00000453177 MYSM1Q5VVJ2 828 aa11.43□□□□□ -0.58
CLIC4P1-201ENST00000453177 MTRQ99707 1265 aa11.43□□□□□ -0.58
CLIC4P1-201ENST00000453177 MOXD2PA6NHM9 499 aa11.42□□□□□ -0.58
CLIC4P1-201ENST00000453177 NR1I2O75469 434 aa11.41□□□□□ -0.58
CLIC4P1-201ENST00000453177 NDUFV2P19404 249 aa11.41□□□□□ -0.58
CLIC4P1-201ENST00000453177 TJAP1Q5JTD0 557 aa11.41□□□□□ -0.58
CLIC4P1-201ENST00000453177 HLA-CQ95604 372 aa11.41□□□□□ -0.58
CLIC4P1-201ENST00000453177 IL21Q9HBE4 155 aa11.41□□□□□ -0.58
CLIC4P1-201ENST00000453177 GUCA2AQ02747 115 aa11.4□□□□□ -0.58
CLIC4P1-201ENST00000453177 SH3D19Q5HYK7 790 aa11.4□□□□□ -0.58
CLIC4P1-201ENST00000453177 SLC27A5Q9Y2P5 690 aa11.4□□□□□ -0.58
CLIC4P1-201ENST00000453177 FDX1P10109 184 aa11.39□□□□□ -0.59
CLIC4P1-201ENST00000453177 RSBN1LQ6PCB5 846 aaPredicted RBP11.39□□□□□ -0.59
CLIC4P1-201ENST00000453177 SCUBE3Q8IX30 993 aa11.39□□□□□ -0.59
CLIC4P1-201ENST00000453177 SPTLC1O15269 473 aa11.38□□□□□ -0.59
CLIC4P1-201ENST00000453177 RIC3Q7Z5B4 369 aa11.38□□□□□ -0.59
CLIC4P1-201ENST00000453177 POLR3EQ9NVU0 708 aa11.38□□□□□ -0.59
CLIC4P1-201ENST00000453177 ITGBL1O95965 494 aaPredicted RBP11.37□□□□□ -0.59
CLIC4P1-201ENST00000453177 GJA5P36382 358 aa11.37□□□□□ -0.59
CLIC4P1-201ENST00000453177 SKIV2LQ15477 1246 aaKnown RBP11.37□□□□□ -0.59
CLIC4P1-201ENST00000453177 ZPR1O75312 459 aa11.36□□□□□ -0.59
CLIC4P1-201ENST00000453177 CLK2P49760 499 aaKnown RBP11.36□□□□□ -0.59
CLIC4P1-201ENST00000453177 ZNF516Q92618 1163 aa11.36□□□□□ -0.59
CLIC4P1-201ENST00000453177 LIMD1Q9UGP4 676 aa11.36□□□□□ -0.59
CLIC4P1-201ENST00000453177 PCDHGC3Q9UN70 934 aa11.36□□□□□ -0.59
CLIC4P1-201ENST00000453177 KCNC4Q03721 635 aa11.35□□□□□ -0.59
CLIC4P1-201ENST00000453177 Q3C1V9 767 aa11.35□□□□□ -0.59
CLIC4P1-201ENST00000453177 GOPCQ9HD26 462 aa11.35□□□□□ -0.59
CLIC4P1-201ENST00000453177 CSPP1Q1MSJ5 1256 aa11.33□□□□□ -0.6
CLIC4P1-201ENST00000453177 ATP1B4Q9UN42 357 aaPredicted RBP11.33□□□□□ -0.6
CLIC4P1-201ENST00000453177 SALL2Q9Y467 1007 aaPredicted RBP11.33□□□□□ -0.6
CLIC4P1-201ENST00000453177 PCDHB15Q9Y5E8 787 aa11.33□□□□□ -0.6
CLIC4P1-201ENST00000453177 TLL1O43897 1013 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms