RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 NRG2O14511 850 aaPredicted RBP9.2□□□□□ -0.94
LINC00393-202ENST00000452852 MAP2K5Q13163 448 aa9.2□□□□□ -0.94
LINC00393-202ENST00000452852 METTL3Q86U44 580 aaKnown RBP9.2□□□□□ -0.94
LINC00393-202ENST00000452852 LRCH3Q96II8 777 aa9.2□□□□□ -0.94
LINC00393-202ENST00000452852 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.2□□□□□ -0.94
LINC00393-202ENST00000452852 ZMYND10O75800 440 aa9.19□□□□□ -0.94
LINC00393-202ENST00000452852 DNAJB2P25686 324 aa9.19□□□□□ -0.94
LINC00393-202ENST00000452852 SWT1Q5T5J6 900 aaKnown RBP9.19□□□□□ -0.94
LINC00393-202ENST00000452852 IRF6O14896 467 aa9.18□□□□□ -0.94
LINC00393-202ENST00000452852 HDGFP51858 240 aaKnown RBP9.18□□□□□ -0.94
LINC00393-202ENST00000452852 ZNF775Q96BV0 537 aaPredicted RBP9.18□□□□□ -0.94
LINC00393-202ENST00000452852 MINK1Q8N4C8 1332 aaPredicted RBP9.17□□□□□ -0.94
LINC00393-202ENST00000452852 BARGINQ6ZT62 677 aa9.17□□□□□ -0.94
LINC00393-202ENST00000452852 PHOX2BQ99453 314 aa9.17□□□□□ -0.94
LINC00393-202ENST00000452852 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.16□□□□□ -0.94
LINC00393-202ENST00000452852 TMEM134Q9H6X4 195 aa9.16□□□□□ -0.94
LINC00393-202ENST00000452852 HPS5Q9UPZ3 1129 aa9.16□□□□□ -0.94
LINC00393-202ENST00000452852 RNF40O75150 1001 aa9.15□□□□□ -0.94
LINC00393-202ENST00000452852 KRI1Q8N9T8 703 aaKnown RBP9.15□□□□□ -0.94
LINC00393-202ENST00000452852 NLRP7Q8WX94 980 aa9.15□□□□□ -0.94
LINC00393-202ENST00000452852 CCDC102AQ96A19 550 aa9.15□□□□□ -0.94
LINC00393-202ENST00000452852 WBP1LQ9NX94 342 aa9.15□□□□□ -0.94
LINC00393-202ENST00000452852 TSR3Q9UJK0 312 aaKnown RBP9.15□□□□□ -0.94
LINC00393-202ENST00000452852 TPRNQ4KMQ1 711 aa9.14□□□□□ -0.95
LINC00393-202ENST00000452852 PPP4CP60510 307 aa9.13□□□□□ -0.95
LINC00393-202ENST00000452852 SLF2Q8IX21 1173 aa9.12□□□□□ -0.95
LINC00393-202ENST00000452852 SLC4A3P48751 1232 aa9.1□□□□□ -0.95
LINC00393-202ENST00000452852 PRKD2Q9BZL6 878 aa9.09□□□□□ -0.95
LINC00393-202ENST00000452852 DAXXQ9UER7 740 aaPredicted RBP9.09□□□□□ -0.95
LINC00393-202ENST00000452852 SLC10A3P09131 477 aa9.06□□□□□ -0.96
LINC00393-202ENST00000452852 MDM2Q00987 491 aaPredicted RBP9.06□□□□□ -0.96
LINC00393-202ENST00000452852 SLC24A3Q9HC58 644 aa9.06□□□□□ -0.96
LINC00393-202ENST00000452852 APLP1P51693 650 aa9.05□□□□□ -0.96
LINC00393-202ENST00000452852 NECTIN2Q92692 538 aa9.05□□□□□ -0.96
LINC00393-202ENST00000452852 DDX11L8A8MPP1 907 aa9.04□□□□□ -0.96
LINC00393-202ENST00000452852 AK7Q96M32 723 aa9.04□□□□□ -0.96
LINC00393-202ENST00000452852 V9GY48 417 aaPredicted RBP9.04□□□□□ -0.96
LINC00393-202ENST00000452852 NISCHQ9Y2I1 1504 aa9.04□□□□□ -0.96
LINC00393-202ENST00000452852 PDZRN3Q9UPQ7 1066 aa9.03□□□□□ -0.96
LINC00393-202ENST00000452852 TRIM66O15016 1216 aa9.02□□□□□ -0.97
LINC00393-202ENST00000452852 CFHP08603 1231 aa9.02□□□□□ -0.97
LINC00393-202ENST00000452852 SULF1Q8IWU6 871 aa9.02□□□□□ -0.97
LINC00393-202ENST00000452852 RDH13Q8NBN7 331 aa9.02□□□□□ -0.97
LINC00393-202ENST00000452852 CLCN1P35523 988 aa9.01□□□□□ -0.97
LINC00393-202ENST00000452852 AMHR2Q16671 573 aa9.01□□□□□ -0.97
LINC00393-202ENST00000452852 RSPH4AQ5TD94 716 aa9.01□□□□□ -0.97
LINC00393-202ENST00000452852 TMUB1Q9BVT8 246 aa9.01□□□□□ -0.97
LINC00393-202ENST00000452852 REPIN1Q9BWE0 567 aaKnown RBP9.01□□□□□ -0.97
LINC00393-202ENST00000452852 GPCPD1Q9NPB8 672 aa9.01□□□□□ -0.97
LINC00393-202ENST00000452852 TTLL12Q14166 644 aaPredicted RBP8.99□□□□□ -0.97
LINC00393-202ENST00000452852 KMT5BQ4FZB7 885 aa8.99□□□□□ -0.97
LINC00393-202ENST00000452852 PRR14Q9BWN1 585 aa8.99□□□□□ -0.97
LINC00393-202ENST00000452852 FAM217BQ9NTX9 383 aaPredicted RBP8.98□□□□□ -0.97
LINC00393-202ENST00000452852 ACTN4O43707 911 aaKnown RBP8.97□□□□□ -0.97
LINC00393-202ENST00000452852 TJAP1Q5JTD0 557 aa8.97□□□□□ -0.97
LINC00393-202ENST00000452852 MTRQ99707 1265 aa8.97□□□□□ -0.97
LINC00393-202ENST00000452852 CD46P15529 392 aa8.96□□□□□ -0.98
LINC00393-202ENST00000452852 GCGRP47871 477 aa8.96□□□□□ -0.98
LINC00393-202ENST00000452852 PDE4DQ08499 809 aa8.96□□□□□ -0.98
LINC00393-202ENST00000452852 PARP9Q8IXQ6 854 aa8.96□□□□□ -0.98
LINC00393-202ENST00000452852 PCDHB3Q9Y5E6 796 aa8.96□□□□□ -0.98
LINC00393-202ENST00000452852 COPS2P61201 443 aa8.95□□□□□ -0.98
LINC00393-202ENST00000452852 GIGYF2Q6Y7W6 1299 aaKnown RBP8.95□□□□□ -0.98
LINC00393-202ENST00000452852 SSTR3P32745 418 aaPredicted RBP8.94□□□□□ -0.98
LINC00393-202ENST00000452852 ZNF516Q92618 1163 aa8.94□□□□□ -0.98
LINC00393-202ENST00000452852 IL21Q9HBE4 155 aa8.94□□□□□ -0.98
LINC00393-202ENST00000452852 FUT2Q10981 343 aa8.93□□□□□ -0.98
LINC00393-202ENST00000452852 BLOC1S3Q6QNY0 202 aa8.93□□□□□ -0.98
LINC00393-202ENST00000452852 PUS10Q3MIT2 529 aaKnown RBP8.92□□□□□ -0.98
LINC00393-202ENST00000452852 PPP1R18Q6NYC8 613 aa8.91□□□□□ -0.98
LINC00393-202ENST00000452852 TREML4Q6UXN2 200 aa8.9□□□□□ -0.98
LINC00393-202ENST00000452852 KDM4AO75164 1064 aa8.89□□□□□ -0.99
LINC00393-202ENST00000452852 ZPR1O75312 459 aa8.89□□□□□ -0.99
LINC00393-202ENST00000452852 MS4A1P11836 297 aa8.89□□□□□ -0.99
LINC00393-202ENST00000452852 ATP6V1AP38606 617 aa8.89□□□□□ -0.99
LINC00393-202ENST00000452852 NR1I2O75469 434 aa8.88□□□□□ -0.99
LINC00393-202ENST00000452852 PKDCCQ504Y2 493 aa8.88□□□□□ -0.99
LINC00393-202ENST00000452852 MORN1Q5T089 497 aa8.88□□□□□ -0.99
LINC00393-202ENST00000452852 SCUBE3Q8IX30 993 aa8.88□□□□□ -0.99
LINC00393-202ENST00000452852 NKX2-3Q8TAU0 364 aa8.88□□□□□ -0.99
LINC00393-202ENST00000452852 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.88□□□□□ -0.99
LINC00393-202ENST00000452852 BEGAINQ9BUH8 593 aa8.87□□□□□ -0.99
LINC00393-202ENST00000452852 TLL1O43897 1013 aa8.86□□□□□ -0.99
LINC00393-202ENST00000452852 GRIPAP1Q4V328 841 aa8.86□□□□□ -0.99
LINC00393-202ENST00000452852 NUTM1Q86Y26 1132 aa8.86□□□□□ -0.99
LINC00393-202ENST00000452852 GPBP1L1Q9HC44 474 aaPredicted RBP8.86□□□□□ -0.99
LINC00393-202ENST00000452852 STK17AQ9UEE5 414 aa8.86□□□□□ -0.99
LINC00393-202ENST00000452852 GGCXP38435 758 aa8.85□□□□□ -0.99
LINC00393-202ENST00000452852 USP46P62068 366 aa8.85□□□□□ -0.99
LINC00393-202ENST00000452852 HLA-CQ95604 372 aa8.85□□□□□ -0.99
LINC00393-202ENST00000452852 SLC27A5Q9Y2P5 690 aa8.85□□□□□ -0.99
LINC00393-202ENST00000452852 HOXA2O43364 376 aa8.84□□□□□ -0.99
LINC00393-202ENST00000452852 SPIRE2Q8WWL2 714 aa8.84□□□□□ -0.99
LINC00393-202ENST00000452852 GUCA2AQ02747 115 aa8.82□□□□□ -1
LINC00393-202ENST00000452852 KDM4CQ9H3R0 1056 aa8.82□□□□□ -1
LINC00393-202ENST00000452852 DGAT1O75907 488 aa8.81□□□□□ -1
LINC00393-202ENST00000452852 ADH1BP00325 375 aa8.81□□□□□ -1
LINC00393-202ENST00000452852 THAP11Q96EK4 314 aa8.81□□□□□ -1
LINC00393-202ENST00000452852 NDUFV2P19404 249 aa8.8□□□□□ -1
LINC00393-202ENST00000452852 MYT1Q01538 1121 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms