RNA–Protein interactions for RNA: ENST00000451091.2

PABPC4-207, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-207ENST00000451091 LTKP29376 864 aa34.2■■■■□ 3.07
PABPC4-207ENST00000451091 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.19■■■■□ 3.06
PABPC4-207ENST00000451091 RIMS2Q9UQ26 1411 aa34.18■■■■□ 3.06
PABPC4-207ENST00000451091 NPHP4O75161 1426 aaPredicted RBP34.15■■■■□ 3.06
PABPC4-207ENST00000451091 SPATA31E1Q6ZUB1 1445 aa34.14■■■■□ 3.06
PABPC4-207ENST00000451091 DHX57Q6P158 1386 aaKnown RBP34.14■■■■□ 3.06
PABPC4-207ENST00000451091 RPGRIP1LQ68CZ1 1315 aa34.14■■■■□ 3.06
PABPC4-207ENST00000451091 IQGAP1P46940 1657 aa34.12■■■■□ 3.05
PABPC4-207ENST00000451091 ZNF326Q5BKZ1 582 aaKnown RBP34.11■■■■□ 3.05
PABPC4-207ENST00000451091 NEXMIFQ5QGS0 1516 aa34.08■■■■□ 3.05
PABPC4-207ENST00000451091 PLEKHG1Q9ULL1 1385 aa34.07■■■■□ 3.04
PABPC4-207ENST00000451091 PPLO60437 1756 aa34.03■■■■□ 3.04
PABPC4-207ENST00000451091 PPP1R15AO75807 674 aaPredicted RBP34.03■■■■□ 3.04
PABPC4-207ENST00000451091 VGFO15240 615 aaPredicted RBP34.02■■■■□ 3.04
PABPC4-207ENST00000451091 IFT172Q9UG01 1749 aa33.99■■■■□ 3.03
PABPC4-207ENST00000451091 RGL3Q3MIN7 710 aa33.99■■■■□ 3.03
PABPC4-207ENST00000451091 NUTM2DQ5VT03 806 aaPredicted RBP33.95■■■■□ 3.03
PABPC4-207ENST00000451091 SETBP1Q9Y6X0 1596 aa33.94■■■■□ 3.02
PABPC4-207ENST00000451091 STAC3Q96MF2 364 aa33.94■■■■□ 3.02
PABPC4-207ENST00000451091 TBX22Q9Y458 520 aa33.93■■■■□ 3.02
PABPC4-207ENST00000451091 DIP2AQ14689 1571 aa33.92■■■■□ 3.02
PABPC4-207ENST00000451091 ADAMTS13Q76LX8 1427 aa33.89■■■■□ 3.02
PABPC4-207ENST00000451091 BCANQ96GW7 911 aa33.89■■■■□ 3.02
PABPC4-207ENST00000451091 SLC26A8Q96RN1 970 aa33.88■■■■□ 3.01
PABPC4-207ENST00000451091 NRXN3Q9Y4C0 1643 aa33.88■■■■□ 3.01
PABPC4-207ENST00000451091 MYOM2P54296 1465 aa33.87■■■■□ 3.01
PABPC4-207ENST00000451091 LTBP4Q8N2S1 1624 aa33.85■■■■□ 3.01
PABPC4-207ENST00000451091 ZNF335Q9H4Z2 1342 aaPredicted RBP33.84■■■■□ 3.01
PABPC4-207ENST00000451091 PIK3R4Q99570 1358 aa33.84■■■■□ 3.01
PABPC4-207ENST00000451091 CLSPNQ9HAW4 1339 aa33.83■■■■□ 3.01
PABPC4-207ENST00000451091 SIN3AQ96ST3 1273 aa33.83■■■■□ 3.01
PABPC4-207ENST00000451091 NRXN1Q9ULB1 1477 aa33.82■■■■□ 3.01
PABPC4-207ENST00000451091 ADGRF5Q8IZF2 1346 aa33.82■■■■□ 3.01
PABPC4-207ENST00000451091 CPS1P31327 1500 aa33.79■■■■□ 3
PABPC4-207ENST00000451091 CHD2O14647 1828 aaKnown RBP33.79■■■■□ 3
PABPC4-207ENST00000451091 PIK3C2GO75747 1445 aa33.79■■■■□ 3
PABPC4-207ENST00000451091 KCNA6P17658 529 aa33.78■■■■□ 3
PABPC4-207ENST00000451091 DCAF11Q8TEB1 546 aa33.78■■■■□ 3
PABPC4-207ENST00000451091 ALKQ9UM73 1620 aa33.77■■■■□ 3
PABPC4-207ENST00000451091 STRCP1A6NGW2 1772 aa33.76■■■■□ 3
PABPC4-207ENST00000451091 NWD1Q149M9 1564 aa33.75■■■□□ 2.99
PABPC4-207ENST00000451091 SETD1AO15047 1707 aaKnown RBP33.75■■■□□ 2.99
PABPC4-207ENST00000451091 NEUROD1Q13562 356 aa33.74■■■□□ 2.99
PABPC4-207ENST00000451091 SENP3Q9H4L4 574 aaPredicted RBP33.73■■■□□ 2.99
PABPC4-207ENST00000451091 LAMC1P11047 1609 aa33.7■■■□□ 2.99
PABPC4-207ENST00000451091 C14orf93Q9H972 538 aaKnown RBP33.69■■■□□ 2.98
PABPC4-207ENST00000451091 KDM2AQ9Y2K7 1162 aa33.69■■■□□ 2.98
PABPC4-207ENST00000451091 METP08581 1390 aa33.69■■■□□ 2.98
PABPC4-207ENST00000451091 IQSEC2Q5JU85 1478 aa33.69■■■□□ 2.98
PABPC4-207ENST00000451091 CERKQ8TCT0 537 aa33.68■■■□□ 2.98
PABPC4-207ENST00000451091 L3MBTL2Q969R5 705 aa33.68■■■□□ 2.98
PABPC4-207ENST00000451091 NKTRP30414 1462 aaKnown RBP33.68■■■□□ 2.98
PABPC4-207ENST00000451091 PTPRUQ92729 1446 aa33.64■■■□□ 2.98
PABPC4-207ENST00000451091 AMOTL2Q9Y2J4 779 aa33.63■■■□□ 2.97
PABPC4-207ENST00000451091 LRRC7Q96NW7 1537 aa33.63■■■□□ 2.97
PABPC4-207ENST00000451091 XRN1Q8IZH2 1706 aaKnown RBP33.62■■■□□ 2.97
PABPC4-207ENST00000451091 CCER1Q8TC90 406 aaPredicted RBP33.62■■■□□ 2.97
PABPC4-207ENST00000451091 PRAG1Q86YV5 1406 aa33.61■■■□□ 2.97
PABPC4-207ENST00000451091 TONSLQ96HA7 1378 aa33.59■■■□□ 2.97
PABPC4-207ENST00000451091 CFAP70Q5T0N1 1121 aa33.58■■■□□ 2.97
PABPC4-207ENST00000451091 TIMELESSQ9UNS1 1208 aa33.58■■■□□ 2.97
PABPC4-207ENST00000451091 KIAA1210Q9ULL0 1709 aa33.58■■■□□ 2.97
PABPC4-207ENST00000451091 NCOA3Q9Y6Q9 1424 aa33.56■■■□□ 2.96
PABPC4-207ENST00000451091 PROSER2Q86WR7 435 aaPredicted RBP33.55■■■□□ 2.96
PABPC4-207ENST00000451091 ASXL1Q8IXJ9 1541 aa33.54■■■□□ 2.96
PABPC4-207ENST00000451091 XIRP1Q702N8 1843 aaKnown RBP33.53■■■□□ 2.96
PABPC4-207ENST00000451091 LRPPRCP42704 1394 aaKnown RBP33.52■■■□□ 2.96
PABPC4-207ENST00000451091 ABCC11Q96J66 1382 aa33.52■■■□□ 2.96
PABPC4-207ENST00000451091 TECPR2O15040 1411 aa33.51■■■□□ 2.95
PABPC4-207ENST00000451091 PTCH1Q13635 1447 aa33.51■■■□□ 2.95
PABPC4-207ENST00000451091 ADGRB1O14514 1584 aa33.51■■■□□ 2.95
PABPC4-207ENST00000451091 TMEM94Q12767 1356 aa33.5■■■□□ 2.95
PABPC4-207ENST00000451091 TMEM132EQ6IEE7 984 aa33.49■■■□□ 2.95
PABPC4-207ENST00000451091 KNDC1Q76NI1 1749 aa33.49■■■□□ 2.95
PABPC4-207ENST00000451091 YTHDC2Q9H6S0 1430 aaKnown RBP33.49■■■□□ 2.95
PABPC4-207ENST00000451091 SIRT1Q96EB6 747 aa33.47■■■□□ 2.95
PABPC4-207ENST00000451091 ROBO2Q9HCK4 1378 aa33.42■■■□□ 2.94
PABPC4-207ENST00000451091 TRPM1Q7Z4N2 1603 aa33.41■■■□□ 2.94
PABPC4-207ENST00000451091 DLC1Q96QB1 1528 aa33.4■■■□□ 2.94
PABPC4-207ENST00000451091 FAM135BQ49AJ0 1406 aa33.4■■■□□ 2.94
PABPC4-207ENST00000451091 STK26Q9P289 416 aa33.39■■■□□ 2.94
PABPC4-207ENST00000451091 NBPF8Q3BBV2 869 aa33.37■■■□□ 2.93
PABPC4-207ENST00000451091 RBM33Q96EV2 1170 aaKnown RBP33.36■■■□□ 2.93
PABPC4-207ENST00000451091 C19orf44Q9H6X5 657 aa33.36■■■□□ 2.93
PABPC4-207ENST00000451091 MSH6P52701 1360 aa33.35■■■□□ 2.93
PABPC4-207ENST00000451091 NBPF1Q3BBV0 1214 aa33.35■■■□□ 2.93
PABPC4-207ENST00000451091 TOM1O60784 492 aa33.34■■■□□ 2.93
PABPC4-207ENST00000451091 FBXO41Q8TF61 875 aa33.33■■■□□ 2.93
PABPC4-207ENST00000451091 DCCP43146 1447 aa33.32■■■□□ 2.92
PABPC4-207ENST00000451091 ADGRL3Q9HAR2 1447 aa33.31■■■□□ 2.92
PABPC4-207ENST00000451091 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.31■■■□□ 2.92
PABPC4-207ENST00000451091 C14orf37Q86TY3 774 aa33.3■■■□□ 2.92
PABPC4-207ENST00000451091 GPRASP1Q5JY77 1395 aa33.29■■■□□ 2.92
PABPC4-207ENST00000451091 NALCNQ8IZF0 1738 aa33.28■■■□□ 2.92
PABPC4-207ENST00000451091 UBAP1LF5GYI3 381 aa33.28■■■□□ 2.92
PABPC4-207ENST00000451091 TRAK1Q9UPV9 953 aa33.28■■■□□ 2.92
PABPC4-207ENST00000451091 RALGAPBQ86X10 1494 aa33.28■■■□□ 2.92
PABPC4-207ENST00000451091 ROCK2O75116 1388 aaKnown RBP33.27■■■□□ 2.92
PABPC4-207ENST00000451091 WAPLQ7Z5K2 1190 aa33.27■■■□□ 2.92
PABPC4-207ENST00000451091 CADPS2Q86UW7 1296 aa33.26■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms