RNA–Protein interactions for RNA: ENST00000450454.6

TCEA3-203, Transcript of transcription elongation factor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCEA3, Length 1,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-203ENST00000450454 PPP1R15AO75807 674 aaPredicted RBP17.5■□□□□ 0.39
TCEA3-203ENST00000450454 ZFYVE9O95405 1425 aa17.5■□□□□ 0.39
TCEA3-203ENST00000450454 RIMS2Q9UQ26 1411 aa17.5■□□□□ 0.39
TCEA3-203ENST00000450454 TMEM131LA2VDJ0 1609 aa17.5■□□□□ 0.39
TCEA3-203ENST00000450454 KCNA6P17658 529 aa17.49■□□□□ 0.39
TCEA3-203ENST00000450454 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.49■□□□□ 0.39
TCEA3-203ENST00000450454 PLEKHG1Q9ULL1 1385 aa17.48■□□□□ 0.39
TCEA3-203ENST00000450454 NAIPQ13075 1403 aa17.47■□□□□ 0.39
TCEA3-203ENST00000450454 MYO5BQ9ULV0 1848 aa17.47■□□□□ 0.39
TCEA3-203ENST00000450454 HSPA1LP34931 641 aa17.47■□□□□ 0.39
TCEA3-203ENST00000450454 ALKQ9UM73 1620 aa17.47■□□□□ 0.39
TCEA3-203ENST00000450454 HRCP23327 699 aa17.45■□□□□ 0.38
TCEA3-203ENST00000450454 SENP3Q9H4L4 574 aaPredicted RBP17.44■□□□□ 0.38
TCEA3-203ENST00000450454 TMEM94Q12767 1356 aa17.43■□□□□ 0.38
TCEA3-203ENST00000450454 PROSER2Q86WR7 435 aaPredicted RBP17.43■□□□□ 0.38
TCEA3-203ENST00000450454 HFM1A2PYH4 1435 aa17.43■□□□□ 0.38
TCEA3-203ENST00000450454 NKTRP30414 1462 aaKnown RBP17.42■□□□□ 0.38
TCEA3-203ENST00000450454 NWD1Q149M9 1564 aa17.42■□□□□ 0.38
TCEA3-203ENST00000450454 XIRP1Q702N8 1843 aaKnown RBP17.41■□□□□ 0.38
TCEA3-203ENST00000450454 TBX22Q9Y458 520 aa17.41■□□□□ 0.38
TCEA3-203ENST00000450454 SPHKAPQ2M3C7 1700 aa17.41■□□□□ 0.38
TCEA3-203ENST00000450454 NUTM2DQ5VT03 806 aaPredicted RBP17.4■□□□□ 0.38
TCEA3-203ENST00000450454 TRIM52Q96A61 297 aa17.4■□□□□ 0.38
TCEA3-203ENST00000450454 DIP2AQ14689 1571 aa17.37■□□□□ 0.37
TCEA3-203ENST00000450454 ZNF326Q5BKZ1 582 aaKnown RBP17.37■□□□□ 0.37
TCEA3-203ENST00000450454 RBM33Q96EV2 1170 aaKnown RBP17.37■□□□□ 0.37
TCEA3-203ENST00000450454 ADAMTS13Q76LX8 1427 aa17.37■□□□□ 0.37
TCEA3-203ENST00000450454 TRPM2O94759 1503 aa17.36■□□□□ 0.37
TCEA3-203ENST00000450454 CHD2O14647 1828 aaKnown RBP17.36■□□□□ 0.37
TCEA3-203ENST00000450454 ILDR2Q71H61 639 aa17.36■□□□□ 0.37
TCEA3-203ENST00000450454 PIK3R4Q99570 1358 aa17.36■□□□□ 0.37
TCEA3-203ENST00000450454 MSH6P52701 1360 aa17.35■□□□□ 0.37
TCEA3-203ENST00000450454 FAM135BQ49AJ0 1406 aa17.34■□□□□ 0.37
TCEA3-203ENST00000450454 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
TCEA3-203ENST00000450454 CLTCL1P53675 1640 aa17.33■□□□□ 0.37
TCEA3-203ENST00000450454 NCOA3Q9Y6Q9 1424 aa17.31■□□□□ 0.36
TCEA3-203ENST00000450454 MED1Q15648 1581 aaPredicted RBP17.31■□□□□ 0.36
TCEA3-203ENST00000450454 SETBP1Q9Y6X0 1596 aa17.29■□□□□ 0.36
TCEA3-203ENST00000450454 C14orf37Q86TY3 774 aa17.29■□□□□ 0.36
TCEA3-203ENST00000450454 AMOTL2Q9Y2J4 779 aa17.29■□□□□ 0.36
TCEA3-203ENST00000450454 KIF1BO60333 1816 aa17.28■□□□□ 0.36
TCEA3-203ENST00000450454 SLAIN2Q9P270 581 aa17.28■□□□□ 0.36
TCEA3-203ENST00000450454 NEXMIFQ5QGS0 1516 aa17.27■□□□□ 0.36
TCEA3-203ENST00000450454 ROBO1Q9Y6N7 1651 aa17.27■□□□□ 0.35
TCEA3-203ENST00000450454 NRXN3Q9Y4C0 1643 aa17.26■□□□□ 0.35
TCEA3-203ENST00000450454 PTPRUQ92729 1446 aa17.26■□□□□ 0.35
TCEA3-203ENST00000450454 ZEB1P37275 1124 aaPredicted RBP17.25■□□□□ 0.35
TCEA3-203ENST00000450454 C19orf44Q9H6X5 657 aa17.25■□□□□ 0.35
TCEA3-203ENST00000450454 SOCS7O14512 581 aa17.24■□□□□ 0.35
TCEA3-203ENST00000450454 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
TCEA3-203ENST00000450454 RPGRIP1LQ68CZ1 1315 aa17.24■□□□□ 0.35
TCEA3-203ENST00000450454 VGFO15240 615 aaPredicted RBP17.23■□□□□ 0.35
TCEA3-203ENST00000450454 CADPS2Q86UW7 1296 aa17.23■□□□□ 0.35
TCEA3-203ENST00000450454 ACIN1Q9UKV3 1341 aaKnown RBP17.23■□□□□ 0.35
TCEA3-203ENST00000450454 METP08581 1390 aa17.23■□□□□ 0.35
TCEA3-203ENST00000450454 ATF3P18847 181 aa17.23■□□□□ 0.35
TCEA3-203ENST00000450454 FOXD1Q16676 465 aa17.23■□□□□ 0.35
TCEA3-203ENST00000450454 MPHOSPH9Q99550 1183 aa17.22■□□□□ 0.35
TCEA3-203ENST00000450454 XRN1Q8IZH2 1706 aaKnown RBP17.21■□□□□ 0.35
TCEA3-203ENST00000450454 CCER1Q8TC90 406 aaPredicted RBP17.21■□□□□ 0.35
TCEA3-203ENST00000450454 CCDC144AA2RUR9 1427 aa17.2■□□□□ 0.34
TCEA3-203ENST00000450454 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.2■□□□□ 0.34
TCEA3-203ENST00000450454 SETD5Q9C0A6 1442 aa17.2■□□□□ 0.34
TCEA3-203ENST00000450454 DCCP43146 1447 aa17.18■□□□□ 0.34
TCEA3-203ENST00000450454 PHLPP1O60346 1717 aa17.16■□□□□ 0.34
TCEA3-203ENST00000450454 PPLO60437 1756 aa17.15■□□□□ 0.34
TCEA3-203ENST00000450454 RGL3Q3MIN7 710 aa17.14■□□□□ 0.33
TCEA3-203ENST00000450454 JCADQ9P266 1359 aa17.14■□□□□ 0.33
TCEA3-203ENST00000450454 ADGRL3Q9HAR2 1447 aa17.13■□□□□ 0.33
TCEA3-203ENST00000450454 PTCH1Q13635 1447 aa17.12■□□□□ 0.33
TCEA3-203ENST00000450454 SPATA31E1Q6ZUB1 1445 aa17.12■□□□□ 0.33
TCEA3-203ENST00000450454 SETD1AO15047 1707 aaKnown RBP17.12■□□□□ 0.33
TCEA3-203ENST00000450454 ANKRD30BQ9BXX2 1392 aa17.11■□□□□ 0.33
TCEA3-203ENST00000450454 RAB3GAP2Q9H2M9 1393 aa17.11■□□□□ 0.33
TCEA3-203ENST00000450454 BRINP3Q76B58 766 aa17.11■□□□□ 0.33
TCEA3-203ENST00000450454 COL16A1Q07092 1604 aaPredicted RBP17.11■□□□□ 0.33
TCEA3-203ENST00000450454 AHDC1Q5TGY3 1603 aaPredicted RBP17.11■□□□□ 0.33
TCEA3-203ENST00000450454 MST1RQ04912 1400 aa17.1■□□□□ 0.33
TCEA3-203ENST00000450454 ADGRF5Q8IZF2 1346 aa17.1■□□□□ 0.33
TCEA3-203ENST00000450454 PRAG1Q86YV5 1406 aa17.09■□□□□ 0.33
TCEA3-203ENST00000450454 ROBO2Q9HCK4 1378 aa17.09■□□□□ 0.33
TCEA3-203ENST00000450454 RGS17Q9UGC6 210 aaPredicted RBP17.08■□□□□ 0.32
TCEA3-203ENST00000450454 DHX57Q6P158 1386 aaKnown RBP17.08■□□□□ 0.32
TCEA3-203ENST00000450454 NALCNQ8IZF0 1738 aa17.08■□□□□ 0.32
TCEA3-203ENST00000450454 ASXL1Q8IXJ9 1541 aa17.08■□□□□ 0.32
TCEA3-203ENST00000450454 SPATA31A6Q5VVP1 1343 aa17.06■□□□□ 0.32
TCEA3-203ENST00000450454 IFT172Q9UG01 1749 aa17.05■□□□□ 0.32
TCEA3-203ENST00000450454 CLSPNQ9HAW4 1339 aa17.04■□□□□ 0.32
TCEA3-203ENST00000450454 PIK3C2GO75747 1445 aa17.04■□□□□ 0.32
TCEA3-203ENST00000450454 C1orf167Q5SNV9 1468 aa17.03■□□□□ 0.32
TCEA3-203ENST00000450454 SHPRHQ149N8 1683 aa17.02■□□□□ 0.32
TCEA3-203ENST00000450454 STK26Q9P289 416 aa17.02■□□□□ 0.31
TCEA3-203ENST00000450454 LRPPRCP42704 1394 aaKnown RBP17.01■□□□□ 0.31
TCEA3-203ENST00000450454 NHSL1Q5SYE7 1610 aa17.01■□□□□ 0.31
TCEA3-203ENST00000450454 MEX3CQ5U5Q3 659 aaKnown RBP17.01■□□□□ 0.31
TCEA3-203ENST00000450454 LRRC59Q96AG4 307 aaKnown RBP17.01■□□□□ 0.31
TCEA3-203ENST00000450454 TECPR2O15040 1411 aa17.01■□□□□ 0.31
TCEA3-203ENST00000450454 TMEM132EQ6IEE7 984 aa17■□□□□ 0.31
TCEA3-203ENST00000450454 ABCC11Q96J66 1382 aa16.99■□□□□ 0.31
TCEA3-203ENST00000450454 POTEAQ6S8J7 498 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms