RNA–Protein interactions for RNA: ENST00000449337.6

RORA-204, Transcript of RAR related orphan receptor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RORA, Length 1,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-204ENST00000449337 SENP3Q9H4L4 574 aaPredicted RBP30.16■■■□□ 2.42
RORA-204ENST00000449337 ZFYVE9O95405 1425 aa30.16■■■□□ 2.42
RORA-204ENST00000449337 ILDR2Q71H61 639 aa30.15■■■□□ 2.42
RORA-204ENST00000449337 RIMS2Q9UQ26 1411 aa30.12■■■□□ 2.41
RORA-204ENST00000449337 CHGAP10645 457 aaKnown RBP30.1■■■□□ 2.41
RORA-204ENST00000449337 BCANQ96GW7 911 aa30.09■■■□□ 2.41
RORA-204ENST00000449337 KCNA6P17658 529 aa30.08■■■□□ 2.41
RORA-204ENST00000449337 PLEKHG1Q9ULL1 1385 aa30.06■■■□□ 2.4
RORA-204ENST00000449337 TMEM94Q12767 1356 aa30.05■■■□□ 2.4
RORA-204ENST00000449337 PPP1R15AO75807 674 aaPredicted RBP30.05■■■□□ 2.4
RORA-204ENST00000449337 NWD1Q149M9 1564 aa30.05■■■□□ 2.4
RORA-204ENST00000449337 RBM33Q96EV2 1170 aaKnown RBP30.05■■■□□ 2.4
RORA-204ENST00000449337 NUTM2DQ5VT03 806 aaPredicted RBP30.04■■■□□ 2.4
RORA-204ENST00000449337 NAIPQ13075 1403 aa30.04■■■□□ 2.4
RORA-204ENST00000449337 SPHKAPQ2M3C7 1700 aa30.03■■■□□ 2.4
RORA-204ENST00000449337 CHD2O14647 1828 aaKnown RBP30■■■□□ 2.39
RORA-204ENST00000449337 PROSER2Q86WR7 435 aaPredicted RBP30■■■□□ 2.39
RORA-204ENST00000449337 HDGFP51858 240 aaKnown RBP29.99■■■□□ 2.39
RORA-204ENST00000449337 NKTRP30414 1462 aaKnown RBP29.99■■■□□ 2.39
RORA-204ENST00000449337 MED1Q15648 1581 aaPredicted RBP29.98■■■□□ 2.39
RORA-204ENST00000449337 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.97■■■□□ 2.39
RORA-204ENST00000449337 ADAMTS13Q76LX8 1427 aa29.95■■■□□ 2.39
RORA-204ENST00000449337 TBX22Q9Y458 520 aa29.93■■■□□ 2.38
RORA-204ENST00000449337 HFM1A2PYH4 1435 aa29.91■■■□□ 2.38
RORA-204ENST00000449337 CLTCL1P53675 1640 aa29.9■■■□□ 2.38
RORA-204ENST00000449337 DIP2AQ14689 1571 aa29.88■■■□□ 2.37
RORA-204ENST00000449337 TRPM2O94759 1503 aa29.87■■■□□ 2.37
RORA-204ENST00000449337 FAM135BQ49AJ0 1406 aa29.87■■■□□ 2.37
RORA-204ENST00000449337 ROBO1Q9Y6N7 1651 aa29.86■■■□□ 2.37
RORA-204ENST00000449337 NRXN3Q9Y4C0 1643 aa29.84■■■□□ 2.37
RORA-204ENST00000449337 MSH6P52701 1360 aa29.84■■■□□ 2.37
RORA-204ENST00000449337 SOCS7O14512 581 aa29.84■■■□□ 2.37
RORA-204ENST00000449337 TRIM52Q96A61 297 aa29.84■■■□□ 2.37
RORA-204ENST00000449337 ZNF326Q5BKZ1 582 aaKnown RBP29.82■■■□□ 2.36
RORA-204ENST00000449337 PTPRUQ92729 1446 aa29.8■■■□□ 2.36
RORA-204ENST00000449337 KIF1BO60333 1816 aa29.8■■■□□ 2.36
RORA-204ENST00000449337 PIK3R4Q99570 1358 aa29.79■■■□□ 2.36
RORA-204ENST00000449337 SETBP1Q9Y6X0 1596 aa29.79■■■□□ 2.36
RORA-204ENST00000449337 NEXMIFQ5QGS0 1516 aa29.78■■■□□ 2.36
RORA-204ENST00000449337 SLAIN2Q9P270 581 aa29.76■■■□□ 2.35
RORA-204ENST00000449337 AMOTL2Q9Y2J4 779 aa29.75■■■□□ 2.35
RORA-204ENST00000449337 SLC4A1APQ9BWU0 796 aaKnown RBP29.74■■■□□ 2.35
RORA-204ENST00000449337 NCOA3Q9Y6Q9 1424 aa29.73■■■□□ 2.35
RORA-204ENST00000449337 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.73■■■□□ 2.35
RORA-204ENST00000449337 C14orf37Q86TY3 774 aa29.73■■■□□ 2.35
RORA-204ENST00000449337 XRN1Q8IZH2 1706 aaKnown RBP29.72■■■□□ 2.35
RORA-204ENST00000449337 PHF23Q9BUL5 403 aaPredicted RBP29.71■■■□□ 2.35
RORA-204ENST00000449337 METP08581 1390 aa29.7■■■□□ 2.35
RORA-204ENST00000449337 FOXD1Q16676 465 aa29.68■■■□□ 2.34
RORA-204ENST00000449337 PHLPP1O60346 1717 aa29.67■■■□□ 2.34
RORA-204ENST00000449337 C19orf44Q9H6X5 657 aa29.66■■■□□ 2.34
RORA-204ENST00000449337 ATF3P18847 181 aa29.62■■■□□ 2.33
RORA-204ENST00000449337 CADPS2Q86UW7 1296 aa29.62■■■□□ 2.33
RORA-204ENST00000449337 SETD1AO15047 1707 aaKnown RBP29.6■■■□□ 2.33
RORA-204ENST00000449337 PPLO60437 1756 aa29.59■■■□□ 2.33
RORA-204ENST00000449337 COL16A1Q07092 1604 aaPredicted RBP29.58■■■□□ 2.33
RORA-204ENST00000449337 RGS17Q9UGC6 210 aaPredicted RBP29.58■■■□□ 2.33
RORA-204ENST00000449337 VGFO15240 615 aaPredicted RBP29.56■■■□□ 2.32
RORA-204ENST00000449337 MPHOSPH9Q99550 1183 aa29.56■■■□□ 2.32
RORA-204ENST00000449337 RPGRIP1LQ68CZ1 1315 aa29.54■■■□□ 2.32
RORA-204ENST00000449337 DCCP43146 1447 aa29.53■■■□□ 2.32
RORA-204ENST00000449337 NALCNQ8IZF0 1738 aa29.53■■■□□ 2.32
RORA-204ENST00000449337 AHDC1Q5TGY3 1603 aaPredicted RBP29.52■■■□□ 2.32
RORA-204ENST00000449337 JCADQ9P266 1359 aa29.51■■■□□ 2.31
RORA-204ENST00000449337 CCDC144AA2RUR9 1427 aa29.51■■■□□ 2.31
RORA-204ENST00000449337 BRINP3Q76B58 766 aa29.5■■■□□ 2.31
RORA-204ENST00000449337 MST1RQ04912 1400 aa29.5■■■□□ 2.31
RORA-204ENST00000449337 ADGRL3Q9HAR2 1447 aa29.5■■■□□ 2.31
RORA-204ENST00000449337 SPATA31E1Q6ZUB1 1445 aa29.48■■■□□ 2.31
RORA-204ENST00000449337 SETD5Q9C0A6 1442 aa29.48■■■□□ 2.31
RORA-204ENST00000449337 ROBO2Q9HCK4 1378 aa29.46■■■□□ 2.31
RORA-204ENST00000449337 RGL3Q3MIN7 710 aa29.45■■■□□ 2.31
RORA-204ENST00000449337 ASXL1Q8IXJ9 1541 aa29.45■■■□□ 2.31
RORA-204ENST00000449337 PTCH1Q13635 1447 aa29.45■■■□□ 2.3
RORA-204ENST00000449337 IFT172Q9UG01 1749 aa29.45■■■□□ 2.3
RORA-204ENST00000449337 ADGRF5Q8IZF2 1346 aa29.44■■■□□ 2.3
RORA-204ENST00000449337 POTEAQ6S8J7 498 aa29.41■■■□□ 2.3
RORA-204ENST00000449337 LRP6O75581 1613 aa29.41■■■□□ 2.3
RORA-204ENST00000449337 SHPRHQ149N8 1683 aa29.4■■■□□ 2.3
RORA-204ENST00000449337 NHSL1Q5SYE7 1610 aa29.4■■■□□ 2.3
RORA-204ENST00000449337 PRAG1Q86YV5 1406 aa29.4■■■□□ 2.3
RORA-204ENST00000449337 RAB3GAP2Q9H2M9 1393 aa29.39■■■□□ 2.3
RORA-204ENST00000449337 DDX17Q92841 729 aaKnown RBP29.36■■■□□ 2.29
RORA-204ENST00000449337 ANKRD30BQ9BXX2 1392 aa29.35■■■□□ 2.29
RORA-204ENST00000449337 SPATA31A6Q5VVP1 1343 aa29.35■■■□□ 2.29
RORA-204ENST00000449337 C1orf167Q5SNV9 1468 aa29.34■■■□□ 2.29
RORA-204ENST00000449337 ACIN1Q9UKV3 1341 aaKnown RBP29.32■■■□□ 2.28
RORA-204ENST00000449337 PIK3C2GO75747 1445 aa29.3■■■□□ 2.28
RORA-204ENST00000449337 STK26Q9P289 416 aa29.28■■■□□ 2.28
RORA-204ENST00000449337 TMEM132EQ6IEE7 984 aa29.28■■■□□ 2.28
RORA-204ENST00000449337 MEX3CQ5U5Q3 659 aaKnown RBP29.26■■■□□ 2.27
RORA-204ENST00000449337 ORAI2Q96SN7 254 aa29.26■■■□□ 2.27
RORA-204ENST00000449337 NUTM2BA6NNL0 878 aaPredicted RBP29.25■■■□□ 2.27
RORA-204ENST00000449337 NUTM2EB1AL46 878 aaPredicted RBP29.25■■■□□ 2.27
RORA-204ENST00000449337 NUTM2AQ8IVF1 878 aaPredicted RBP29.25■■■□□ 2.27
RORA-204ENST00000449337 LRPPRCP42704 1394 aaKnown RBP29.25■■■□□ 2.27
RORA-204ENST00000449337 TECPR2O15040 1411 aa29.24■■■□□ 2.27
RORA-204ENST00000449337 LAMC1P11047 1609 aa29.24■■■□□ 2.27
RORA-204ENST00000449337 WAPLQ7Z5K2 1190 aa29.23■■■□□ 2.27
RORA-204ENST00000449337 LRRC59Q96AG4 307 aaKnown RBP29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms