RNA–Protein interactions for RNA: ENST00000448502.5

UBE2F-217, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 4

Gene UBE2F, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-217ENST00000448502 TMEM131LA2VDJ0 1609 aa31.3■■■□□ 2.6
UBE2F-217ENST00000448502 ROCK1Q13464 1354 aa31.29■■■□□ 2.6
UBE2F-217ENST00000448502 E9PCH4 1651 aa31.28■■■□□ 2.6
UBE2F-217ENST00000448502 RBM33Q96EV2 1170 aaKnown RBP31.26■■■□□ 2.59
UBE2F-217ENST00000448502 NKTRP30414 1462 aaKnown RBP31.26■■■□□ 2.59
UBE2F-217ENST00000448502 FAM135BQ49AJ0 1406 aa31.25■■■□□ 2.59
UBE2F-217ENST00000448502 RIMS2Q9UQ26 1411 aa31.25■■■□□ 2.59
UBE2F-217ENST00000448502 PROSER2Q86WR7 435 aaPredicted RBP31.25■■■□□ 2.59
UBE2F-217ENST00000448502 PHF23Q9BUL5 403 aaPredicted RBP31.25■■■□□ 2.59
UBE2F-217ENST00000448502 IQGAP3Q86VI3 1631 aa31.24■■■□□ 2.59
UBE2F-217ENST00000448502 PLEKHG1Q9ULL1 1385 aa31.24■■■□□ 2.59
UBE2F-217ENST00000448502 BCANQ96GW7 911 aa31.23■■■□□ 2.59
UBE2F-217ENST00000448502 CHD2O14647 1828 aaKnown RBP31.21■■■□□ 2.59
UBE2F-217ENST00000448502 ROBO1Q9Y6N7 1651 aa31.19■■■□□ 2.58
UBE2F-217ENST00000448502 PPP1R15AO75807 674 aaPredicted RBP31.17■■■□□ 2.58
UBE2F-217ENST00000448502 CHGAP10645 457 aaKnown RBP31.15■■■□□ 2.58
UBE2F-217ENST00000448502 ITGAEP38570 1179 aa31.15■■■□□ 2.58
UBE2F-217ENST00000448502 HDGFP51858 240 aaKnown RBP31.15■■■□□ 2.58
UBE2F-217ENST00000448502 PPARGC1BQ86YN6 1023 aaKnown RBP31.15■■■□□ 2.58
UBE2F-217ENST00000448502 NUP155O75694 1391 aa31.14■■■□□ 2.58
UBE2F-217ENST00000448502 MSH6P52701 1360 aa31.11■■■□□ 2.57
UBE2F-217ENST00000448502 ADAMTS13Q76LX8 1427 aa31.1■■■□□ 2.57
UBE2F-217ENST00000448502 NUTM2DQ5VT03 806 aaPredicted RBP31.1■■■□□ 2.57
UBE2F-217ENST00000448502 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.1■■■□□ 2.57
UBE2F-217ENST00000448502 TBX22Q9Y458 520 aa31.1■■■□□ 2.57
UBE2F-217ENST00000448502 RGS17Q9UGC6 210 aaPredicted RBP31.07■■■□□ 2.56
UBE2F-217ENST00000448502 DIP2AQ14689 1571 aa31.05■■■□□ 2.56
UBE2F-217ENST00000448502 SLAIN2Q9P270 581 aa31.04■■■□□ 2.56
UBE2F-217ENST00000448502 SPHKAPQ2M3C7 1700 aa31.01■■■□□ 2.56
UBE2F-217ENST00000448502 NCOA3Q9Y6Q9 1424 aa31■■■□□ 2.55
UBE2F-217ENST00000448502 PHLPP1O60346 1717 aa30.99■■■□□ 2.55
UBE2F-217ENST00000448502 PIK3R4Q99570 1358 aa30.99■■■□□ 2.55
UBE2F-217ENST00000448502 TRPM2O94759 1503 aa30.96■■■□□ 2.55
UBE2F-217ENST00000448502 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.95■■■□□ 2.55
UBE2F-217ENST00000448502 NRXN3Q9Y4C0 1643 aa30.95■■■□□ 2.54
UBE2F-217ENST00000448502 PTPRUQ92729 1446 aa30.94■■■□□ 2.54
UBE2F-217ENST00000448502 RRBP1Q9P2E9 1410 aaKnown RBP30.92■■■□□ 2.54
UBE2F-217ENST00000448502 C14orf37Q86TY3 774 aa30.92■■■□□ 2.54
UBE2F-217ENST00000448502 COL16A1Q07092 1604 aaPredicted RBP30.91■■■□□ 2.54
UBE2F-217ENST00000448502 AMOTL2Q9Y2J4 779 aa30.9■■■□□ 2.54
UBE2F-217ENST00000448502 SETBP1Q9Y6X0 1596 aa30.89■■■□□ 2.54
UBE2F-217ENST00000448502 POTEAQ6S8J7 498 aa30.88■■■□□ 2.53
UBE2F-217ENST00000448502 C19orf44Q9H6X5 657 aa30.88■■■□□ 2.53
UBE2F-217ENST00000448502 JCADQ9P266 1359 aa30.88■■■□□ 2.53
UBE2F-217ENST00000448502 CLTCL1P53675 1640 aa30.87■■■□□ 2.53
UBE2F-217ENST00000448502 XRN1Q8IZH2 1706 aaKnown RBP30.87■■■□□ 2.53
UBE2F-217ENST00000448502 CADPS2Q86UW7 1296 aa30.86■■■□□ 2.53
UBE2F-217ENST00000448502 NAIPQ13075 1403 aa30.86■■■□□ 2.53
UBE2F-217ENST00000448502 ZNF326Q5BKZ1 582 aaKnown RBP30.84■■■□□ 2.53
UBE2F-217ENST00000448502 ATF3P18847 181 aa30.83■■■□□ 2.53
UBE2F-217ENST00000448502 AHDC1Q5TGY3 1603 aaPredicted RBP30.83■■■□□ 2.53
UBE2F-217ENST00000448502 NEXMIFQ5QGS0 1516 aa30.81■■■□□ 2.52
UBE2F-217ENST00000448502 METP08581 1390 aa30.79■■■□□ 2.52
UBE2F-217ENST00000448502 KIF1BO60333 1816 aa30.78■■■□□ 2.52
UBE2F-217ENST00000448502 DCCP43146 1447 aa30.77■■■□□ 2.52
UBE2F-217ENST00000448502 LRP6O75581 1613 aa30.76■■■□□ 2.51
UBE2F-217ENST00000448502 BRINP3Q76B58 766 aa30.74■■■□□ 2.51
UBE2F-217ENST00000448502 SHPRHQ149N8 1683 aa30.74■■■□□ 2.51
UBE2F-217ENST00000448502 HFM1A2PYH4 1435 aa30.72■■■□□ 2.51
UBE2F-217ENST00000448502 SPATA31A6Q5VVP1 1343 aa30.72■■■□□ 2.51
UBE2F-217ENST00000448502 MST1RQ04912 1400 aa30.7■■■□□ 2.5
UBE2F-217ENST00000448502 ASXL1Q8IXJ9 1541 aa30.69■■■□□ 2.5
UBE2F-217ENST00000448502 TRIM52Q96A61 297 aa30.67■■■□□ 2.5
UBE2F-217ENST00000448502 NALCNQ8IZF0 1738 aa30.67■■■□□ 2.5
UBE2F-217ENST00000448502 ADGRL3Q9HAR2 1447 aa30.66■■■□□ 2.5
UBE2F-217ENST00000448502 SETD1AO15047 1707 aaKnown RBP30.66■■■□□ 2.5
UBE2F-217ENST00000448502 NHSL1Q5SYE7 1610 aa30.65■■■□□ 2.5
UBE2F-217ENST00000448502 MEX3CQ5U5Q3 659 aaKnown RBP30.61■■■□□ 2.49
UBE2F-217ENST00000448502 SLC4A1APQ9BWU0 796 aaKnown RBP30.6■■■□□ 2.49
UBE2F-217ENST00000448502 SETD5Q9C0A6 1442 aa30.59■■■□□ 2.49
UBE2F-217ENST00000448502 VGFO15240 615 aaPredicted RBP30.58■■■□□ 2.49
UBE2F-217ENST00000448502 PPLO60437 1756 aa30.58■■■□□ 2.49
UBE2F-217ENST00000448502 PTCH1Q13635 1447 aa30.57■■■□□ 2.48
UBE2F-217ENST00000448502 ROBO2Q9HCK4 1378 aa30.54■■■□□ 2.48
UBE2F-217ENST00000448502 RPGRIP1LQ68CZ1 1315 aa30.54■■■□□ 2.48
UBE2F-217ENST00000448502 ZNF772Q68DY9 489 aaPredicted RBP30.54■■■□□ 2.48
UBE2F-217ENST00000448502 DDX17Q92841 729 aaKnown RBP30.54■■■□□ 2.48
UBE2F-217ENST00000448502 NUTM2BA6NNL0 878 aaPredicted RBP30.53■■■□□ 2.48
UBE2F-217ENST00000448502 NUTM2EB1AL46 878 aaPredicted RBP30.53■■■□□ 2.48
UBE2F-217ENST00000448502 NUTM2AQ8IVF1 878 aaPredicted RBP30.53■■■□□ 2.48
UBE2F-217ENST00000448502 PRAG1Q86YV5 1406 aa30.52■■■□□ 2.48
UBE2F-217ENST00000448502 C1orf167Q5SNV9 1468 aa30.5■■■□□ 2.47
UBE2F-217ENST00000448502 FOXD1Q16676 465 aa30.5■■■□□ 2.47
UBE2F-217ENST00000448502 LRRC59Q96AG4 307 aaKnown RBP30.49■■■□□ 2.47
UBE2F-217ENST00000448502 PNPLA6Q8IY17 1366 aa30.46■■■□□ 2.47
UBE2F-217ENST00000448502 LAMC1P11047 1609 aa30.46■■■□□ 2.47
UBE2F-217ENST00000448502 AFF2P51816 1311 aa30.43■■■□□ 2.46
UBE2F-217ENST00000448502 ORAI2Q96SN7 254 aa30.41■■■□□ 2.46
UBE2F-217ENST00000448502 CCDC144AA2RUR9 1427 aa30.4■■■□□ 2.46
UBE2F-217ENST00000448502 ADGRF5Q8IZF2 1346 aa30.4■■■□□ 2.46
UBE2F-217ENST00000448502 SPATA31E1Q6ZUB1 1445 aa30.39■■■□□ 2.46
UBE2F-217ENST00000448502 IFT172Q9UG01 1749 aa30.39■■■□□ 2.46
UBE2F-217ENST00000448502 RXRBP28702 533 aa30.39■■■□□ 2.46
UBE2F-217ENST00000448502 MPHOSPH9Q99550 1183 aa30.37■■■□□ 2.45
UBE2F-217ENST00000448502 SOS2Q07890 1332 aaPredicted RBP30.37■■■□□ 2.45
UBE2F-217ENST00000448502 RGL3Q3MIN7 710 aa30.35■■■□□ 2.45
UBE2F-217ENST00000448502 C8orf37Q96NL8 207 aa30.35■■■□□ 2.45
UBE2F-217ENST00000448502 CDK12Q9NYV4 1490 aaPredicted RBP30.35■■■□□ 2.45
UBE2F-217ENST00000448502 CDC42BPGQ6DT37 1551 aa30.34■■■□□ 2.45
UBE2F-217ENST00000448502 UPF1Q92900 1129 aaKnown RBP eCLIP30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 338.3 ms