RNA–Protein interactions for RNA: ENST00000448162.6

CCHCR1-207, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-207ENST00000448162 SLC26A8Q96RN1 970 aa30.17■■■□□ 2.42
CCHCR1-207ENST00000448162 IQGAP3Q86VI3 1631 aa30.17■■■□□ 2.42
CCHCR1-207ENST00000448162 GCC2Q8IWJ2 1684 aa30.17■■■□□ 2.42
CCHCR1-207ENST00000448162 HFM1A2PYH4 1435 aa30.15■■■□□ 2.42
CCHCR1-207ENST00000448162 RPRD2Q5VT52 1461 aaKnown RBP30.15■■■□□ 2.42
CCHCR1-207ENST00000448162 ADGRB3O60242 1522 aa30.14■■■□□ 2.42
CCHCR1-207ENST00000448162 RBM33Q96EV2 1170 aaKnown RBP30.12■■■□□ 2.41
CCHCR1-207ENST00000448162 SLC52A1Q9NWF4 448 aa30.12■■■□□ 2.41
CCHCR1-207ENST00000448162 NWD1Q149M9 1564 aa30.1■■■□□ 2.41
CCHCR1-207ENST00000448162 NUP155O75694 1391 aa30.09■■■□□ 2.41
CCHCR1-207ENST00000448162 PROSER2Q86WR7 435 aaPredicted RBP30.09■■■□□ 2.41
CCHCR1-207ENST00000448162 E9PCH4 1651 aa30.07■■■□□ 2.4
CCHCR1-207ENST00000448162 NKTRP30414 1462 aaKnown RBP30.06■■■□□ 2.4
CCHCR1-207ENST00000448162 ZFYVE9O95405 1425 aa30.06■■■□□ 2.4
CCHCR1-207ENST00000448162 ROBO1Q9Y6N7 1651 aa30.05■■■□□ 2.4
CCHCR1-207ENST00000448162 POTEAQ6S8J7 498 aa30■■■□□ 2.39
CCHCR1-207ENST00000448162 PLEKHG1Q9ULL1 1385 aa30■■■□□ 2.39
CCHCR1-207ENST00000448162 TMEM131LA2VDJ0 1609 aa29.96■■■□□ 2.39
CCHCR1-207ENST00000448162 RIMS2Q9UQ26 1411 aa29.96■■■□□ 2.39
CCHCR1-207ENST00000448162 MSH6P52701 1360 aa29.95■■■□□ 2.39
CCHCR1-207ENST00000448162 SLAIN2Q9P270 581 aa29.95■■■□□ 2.39
CCHCR1-207ENST00000448162 MYO5BQ9ULV0 1848 aa29.94■■■□□ 2.38
CCHCR1-207ENST00000448162 CHD2O14647 1828 aaKnown RBP29.94■■■□□ 2.38
CCHCR1-207ENST00000448162 BCANQ96GW7 911 aa29.93■■■□□ 2.38
CCHCR1-207ENST00000448162 TBX22Q9Y458 520 aa29.91■■■□□ 2.38
CCHCR1-207ENST00000448162 ADAMTS13Q76LX8 1427 aa29.88■■■□□ 2.37
CCHCR1-207ENST00000448162 HDGFP51858 240 aaKnown RBP29.86■■■□□ 2.37
CCHCR1-207ENST00000448162 NCOA3Q9Y6Q9 1424 aa29.86■■■□□ 2.37
CCHCR1-207ENST00000448162 PPP1R15AO75807 674 aaPredicted RBP29.85■■■□□ 2.37
CCHCR1-207ENST00000448162 JCADQ9P266 1359 aa29.84■■■□□ 2.37
CCHCR1-207ENST00000448162 SPHKAPQ2M3C7 1700 aa29.84■■■□□ 2.37
CCHCR1-207ENST00000448162 PHLPP1O60346 1717 aa29.83■■■□□ 2.37
CCHCR1-207ENST00000448162 COL16A1Q07092 1604 aaPredicted RBP29.82■■■□□ 2.36
CCHCR1-207ENST00000448162 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.82■■■□□ 2.36
CCHCR1-207ENST00000448162 NUTM2DQ5VT03 806 aaPredicted RBP29.81■■■□□ 2.36
CCHCR1-207ENST00000448162 SETD5Q9C0A6 1442 aa29.8■■■□□ 2.36
CCHCR1-207ENST00000448162 TRIM52Q96A61 297 aa29.79■■■□□ 2.36
CCHCR1-207ENST00000448162 CHGAP10645 457 aaKnown RBP29.78■■■□□ 2.36
CCHCR1-207ENST00000448162 PIK3R4Q99570 1358 aa29.77■■■□□ 2.36
CCHCR1-207ENST00000448162 TRPM2O94759 1503 aa29.77■■■□□ 2.36
CCHCR1-207ENST00000448162 DIP2AQ14689 1571 aa29.76■■■□□ 2.35
CCHCR1-207ENST00000448162 LRP6O75581 1613 aa29.74■■■□□ 2.35
CCHCR1-207ENST00000448162 PTPRUQ92729 1446 aa29.74■■■□□ 2.35
CCHCR1-207ENST00000448162 SLC4A1APQ9BWU0 796 aaKnown RBP29.74■■■□□ 2.35
CCHCR1-207ENST00000448162 C19orf44Q9H6X5 657 aa29.74■■■□□ 2.35
CCHCR1-207ENST00000448162 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.73■■■□□ 2.35
CCHCR1-207ENST00000448162 ACIN1Q9UKV3 1341 aaKnown RBP29.71■■■□□ 2.35
CCHCR1-207ENST00000448162 CLTCL1P53675 1640 aa29.71■■■□□ 2.35
CCHCR1-207ENST00000448162 CADPS2Q86UW7 1296 aa29.71■■■□□ 2.35
CCHCR1-207ENST00000448162 AHDC1Q5TGY3 1603 aaPredicted RBP29.71■■■□□ 2.35
CCHCR1-207ENST00000448162 RAB3GAP2Q9H2M9 1393 aa29.7■■■□□ 2.35
CCHCR1-207ENST00000448162 AMOTL2Q9Y2J4 779 aa29.69■■■□□ 2.34
CCHCR1-207ENST00000448162 SPATA31A6Q5VVP1 1343 aa29.69■■■□□ 2.34
CCHCR1-207ENST00000448162 C14orf37Q86TY3 774 aa29.68■■■□□ 2.34
CCHCR1-207ENST00000448162 MPHOSPH9Q99550 1183 aa29.68■■■□□ 2.34
CCHCR1-207ENST00000448162 SETD1AO15047 1707 aaKnown RBP29.68■■■□□ 2.34
CCHCR1-207ENST00000448162 ATF3P18847 181 aa29.65■■■□□ 2.34
CCHCR1-207ENST00000448162 NRXN3Q9Y4C0 1643 aa29.64■■■□□ 2.34
CCHCR1-207ENST00000448162 HRCP23327 699 aa29.64■■■□□ 2.34
CCHCR1-207ENST00000448162 BRINP3Q76B58 766 aa29.64■■■□□ 2.34
CCHCR1-207ENST00000448162 SHPRHQ149N8 1683 aa29.61■■■□□ 2.33
CCHCR1-207ENST00000448162 FOXD1Q16676 465 aa29.6■■■□□ 2.33
CCHCR1-207ENST00000448162 DCCP43146 1447 aa29.6■■■□□ 2.33
CCHCR1-207ENST00000448162 SETBP1Q9Y6X0 1596 aa29.6■■■□□ 2.33
CCHCR1-207ENST00000448162 XRN1Q8IZH2 1706 aaKnown RBP29.59■■■□□ 2.33
CCHCR1-207ENST00000448162 KIF1BO60333 1816 aa29.58■■■□□ 2.33
CCHCR1-207ENST00000448162 METP08581 1390 aa29.56■■■□□ 2.32
CCHCR1-207ENST00000448162 ZNF772Q68DY9 489 aaPredicted RBP29.56■■■□□ 2.32
CCHCR1-207ENST00000448162 NEXMIFQ5QGS0 1516 aa29.55■■■□□ 2.32
CCHCR1-207ENST00000448162 MST1RQ04912 1400 aa29.54■■■□□ 2.32
CCHCR1-207ENST00000448162 ASXL1Q8IXJ9 1541 aa29.54■■■□□ 2.32
CCHCR1-207ENST00000448162 MEX3CQ5U5Q3 659 aaKnown RBP29.53■■■□□ 2.32
CCHCR1-207ENST00000448162 UPF1Q92900 1129 aaKnown RBP eCLIP29.49■■■□□ 2.31
CCHCR1-207ENST00000448162 SPATA31E1Q6ZUB1 1445 aa29.47■■■□□ 2.31
CCHCR1-207ENST00000448162 CCDC144AA2RUR9 1427 aa29.46■■■□□ 2.31
CCHCR1-207ENST00000448162 NHSL1Q5SYE7 1610 aa29.46■■■□□ 2.31
CCHCR1-207ENST00000448162 ZNF326Q5BKZ1 582 aaKnown RBP29.46■■■□□ 2.31
CCHCR1-207ENST00000448162 NUTM2BA6NNL0 878 aaPredicted RBP29.45■■■□□ 2.31
CCHCR1-207ENST00000448162 NUTM2EB1AL46 878 aaPredicted RBP29.45■■■□□ 2.31
CCHCR1-207ENST00000448162 NUTM2AQ8IVF1 878 aaPredicted RBP29.45■■■□□ 2.31
CCHCR1-207ENST00000448162 ADGRL3Q9HAR2 1447 aa29.45■■■□□ 2.3
CCHCR1-207ENST00000448162 RPGRIP1LQ68CZ1 1315 aa29.44■■■□□ 2.3
CCHCR1-207ENST00000448162 RXRBP28702 533 aa29.43■■■□□ 2.3
CCHCR1-207ENST00000448162 DDX17Q92841 729 aaKnown RBP29.42■■■□□ 2.3
CCHCR1-207ENST00000448162 ANKRD30BQ9BXX2 1392 aa29.41■■■□□ 2.3
CCHCR1-207ENST00000448162 PPLO60437 1756 aa29.41■■■□□ 2.3
CCHCR1-207ENST00000448162 CDK12Q9NYV4 1490 aaPredicted RBP29.41■■■□□ 2.3
CCHCR1-207ENST00000448162 LRRC59Q96AG4 307 aaKnown RBP29.4■■■□□ 2.3
CCHCR1-207ENST00000448162 AFF2P51816 1311 aa29.4■■■□□ 2.3
CCHCR1-207ENST00000448162 NALCNQ8IZF0 1738 aa29.39■■■□□ 2.3
CCHCR1-207ENST00000448162 PNPLA6Q8IY17 1366 aa29.38■■■□□ 2.29
CCHCR1-207ENST00000448162 IFT172Q9UG01 1749 aa29.35■■■□□ 2.29
CCHCR1-207ENST00000448162 VGFO15240 615 aaPredicted RBP29.35■■■□□ 2.29
CCHCR1-207ENST00000448162 C1orf167Q5SNV9 1468 aa29.34■■■□□ 2.29
CCHCR1-207ENST00000448162 PTCH1Q13635 1447 aa29.31■■■□□ 2.28
CCHCR1-207ENST00000448162 ROBO2Q9HCK4 1378 aa29.31■■■□□ 2.28
CCHCR1-207ENST00000448162 LAMC1P11047 1609 aa29.3■■■□□ 2.28
CCHCR1-207ENST00000448162 PRAG1Q86YV5 1406 aa29.29■■■□□ 2.28
CCHCR1-207ENST00000448162 C8orf37Q96NL8 207 aa29.29■■■□□ 2.28
CCHCR1-207ENST00000448162 RGS12O14924 1447 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms