RNA–Protein interactions for RNA: ENST00000448087.5

GTF3C3-205, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 1,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-205ENST00000448087 SWT1Q5T5J6 900 aaKnown RBP9.99□□□□□ -0.81
GTF3C3-205ENST00000448087 SAMD7Q7Z3H4 446 aa9.99□□□□□ -0.81
GTF3C3-205ENST00000448087 TMUB1Q9BVT8 246 aa9.99□□□□□ -0.81
GTF3C3-205ENST00000448087 GPBP1L1Q9HC44 474 aaPredicted RBP9.99□□□□□ -0.81
GTF3C3-205ENST00000448087 DAXXQ9UER7 740 aaPredicted RBP9.99□□□□□ -0.81
GTF3C3-205ENST00000448087 HDGFP51858 240 aaKnown RBP9.97□□□□□ -0.81
GTF3C3-205ENST00000448087 GIGYF2Q6Y7W6 1299 aaKnown RBP9.97□□□□□ -0.81
GTF3C3-205ENST00000448087 WNT2BQ93097 391 aa9.96□□□□□ -0.81
GTF3C3-205ENST00000448087 ANKK1Q8NFD2 765 aa9.96□□□□□ -0.82
GTF3C3-205ENST00000448087 KDM4CQ9H3R0 1056 aa9.96□□□□□ -0.82
GTF3C3-205ENST00000448087 SPNS2Q8IVW8 549 aa9.95□□□□□ -0.82
GTF3C3-205ENST00000448087 LRCH3Q96II8 777 aa9.95□□□□□ -0.82
GTF3C3-205ENST00000448087 FAM217BQ9NTX9 383 aaPredicted RBP9.94□□□□□ -0.82
GTF3C3-205ENST00000448087 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.94□□□□□ -0.82
GTF3C3-205ENST00000448087 RNF40O75150 1001 aa9.93□□□□□ -0.82
GTF3C3-205ENST00000448087 KCTD12Q96CX2 325 aaKnown RBP9.93□□□□□ -0.82
GTF3C3-205ENST00000448087 MYT1LQ9UL68 1186 aa9.93□□□□□ -0.82
GTF3C3-205ENST00000448087 SOWAHBA6NEL2 793 aa9.93□□□□□ -0.82
GTF3C3-205ENST00000448087 DDX11L8A8MPP1 907 aa9.93□□□□□ -0.82
GTF3C3-205ENST00000448087 SSTR3P32745 418 aaPredicted RBP9.93□□□□□ -0.82
GTF3C3-205ENST00000448087 BCAMP50895 628 aa9.93□□□□□ -0.82
GTF3C3-205ENST00000448087 SLF2Q8IX21 1173 aa9.93□□□□□ -0.82
GTF3C3-205ENST00000448087 MS4A1P11836 297 aa9.92□□□□□ -0.82
GTF3C3-205ENST00000448087 SLC4A3P48751 1232 aa9.92□□□□□ -0.82
GTF3C3-205ENST00000448087 SULF1Q8IWU6 871 aa9.92□□□□□ -0.82
GTF3C3-205ENST00000448087 SLC10A3P09131 477 aa9.9□□□□□ -0.82
GTF3C3-205ENST00000448087 THSD4Q6ZMP0 1018 aa9.9□□□□□ -0.83
GTF3C3-205ENST00000448087 RDH13Q8NBN7 331 aa9.9□□□□□ -0.83
GTF3C3-205ENST00000448087 CD46P15529 392 aa9.89□□□□□ -0.83
GTF3C3-205ENST00000448087 HPS5Q9UPZ3 1129 aa9.88□□□□□ -0.83
GTF3C3-205ENST00000448087 RSPH4AQ5TD94 716 aa9.87□□□□□ -0.83
GTF3C3-205ENST00000448087 FAM117AQ9C073 453 aa9.87□□□□□ -0.83
GTF3C3-205ENST00000448087 TSR3Q9UJK0 312 aaKnown RBP9.87□□□□□ -0.83
GTF3C3-205ENST00000448087 PPP4CP60510 307 aa9.86□□□□□ -0.83
GTF3C3-205ENST00000448087 RNF166Q96A37 237 aaPredicted RBP9.86□□□□□ -0.83
GTF3C3-205ENST00000448087 BEGAINQ9BUH8 593 aa9.86□□□□□ -0.83
GTF3C3-205ENST00000448087 CFHP08603 1231 aa9.85□□□□□ -0.83
GTF3C3-205ENST00000448087 WBP1LQ9NX94 342 aa9.85□□□□□ -0.83
GTF3C3-205ENST00000448087 NECTIN2Q92692 538 aa9.84□□□□□ -0.83
GTF3C3-205ENST00000448087 GCGRP47871 477 aa9.83□□□□□ -0.84
GTF3C3-205ENST00000448087 PTPN5P54829 565 aa9.83□□□□□ -0.84
GTF3C3-205ENST00000448087 PLEKHG3A1L390 1219 aa9.82□□□□□ -0.84
GTF3C3-205ENST00000448087 MMRN1Q13201 1228 aa9.82□□□□□ -0.84
GTF3C3-205ENST00000448087 IL27Q8NEV9 243 aa9.82□□□□□ -0.84
GTF3C3-205ENST00000448087 DDRGK1Q96HY6 314 aa9.82□□□□□ -0.84
GTF3C3-205ENST00000448087 APLP1P51693 650 aa9.8□□□□□ -0.84
GTF3C3-205ENST00000448087 KMT5BQ4FZB7 885 aa9.79□□□□□ -0.84
GTF3C3-205ENST00000448087 KDM4AO75164 1064 aa9.79□□□□□ -0.84
GTF3C3-205ENST00000448087 NUTM1Q86Y26 1132 aa9.79□□□□□ -0.84
GTF3C3-205ENST00000448087 SPIRE2Q8WWL2 714 aa9.79□□□□□ -0.84
GTF3C3-205ENST00000448087 PRR14Q9BWN1 585 aa9.78□□□□□ -0.84
GTF3C3-205ENST00000448087 ACTN4O43707 911 aaKnown RBP9.77□□□□□ -0.85
GTF3C3-205ENST00000448087 NYAP1Q6ZVC0 841 aa9.77□□□□□ -0.85
GTF3C3-205ENST00000448087 TBC1D2Q9BYX2 928 aa9.77□□□□□ -0.85
GTF3C3-205ENST00000448087 FUT2Q10981 343 aa9.76□□□□□ -0.85
GTF3C3-205ENST00000448087 HCSTQ9UBK5 93 aa9.76□□□□□ -0.85
GTF3C3-205ENST00000448087 USP46P62068 366 aa9.74□□□□□ -0.85
GTF3C3-205ENST00000448087 DIXDC1Q155Q3 683 aa9.74□□□□□ -0.85
GTF3C3-205ENST00000448087 HOXA2O43364 376 aa9.73□□□□□ -0.85
GTF3C3-205ENST00000448087 MYSM1Q5VVJ2 828 aa9.73□□□□□ -0.85
GTF3C3-205ENST00000448087 RSPH6AQ9H0K4 717 aa9.73□□□□□ -0.85
GTF3C3-205ENST00000448087 ATP6V1AP38606 617 aa9.73□□□□□ -0.85
GTF3C3-205ENST00000448087 PUS10Q3MIT2 529 aaKnown RBP9.73□□□□□ -0.85
GTF3C3-205ENST00000448087 MOXD2PA6NHM9 499 aa9.72□□□□□ -0.85
GTF3C3-205ENST00000448087 HLA-CQ95604 372 aa9.72□□□□□ -0.85
GTF3C3-205ENST00000448087 PCDHB3Q9Y5E6 796 aa9.72□□□□□ -0.85
GTF3C3-205ENST00000448087 NDUFV2P19404 249 aa9.71□□□□□ -0.85
GTF3C3-205ENST00000448087 GRIPAP1Q4V328 841 aa9.71□□□□□ -0.85
GTF3C3-205ENST00000448087 SH3D19Q5HYK7 790 aa9.71□□□□□ -0.85
GTF3C3-205ENST00000448087 TMEM132AQ24JP5 1023 aa9.7□□□□□ -0.86
GTF3C3-205ENST00000448087 POLR3EQ9NVU0 708 aa9.7□□□□□ -0.86
GTF3C3-205ENST00000448087 GUCA2AQ02747 115 aa9.7□□□□□ -0.86
GTF3C3-205ENST00000448087 MORN1Q5T089 497 aa9.7□□□□□ -0.86
GTF3C3-205ENST00000448087 BLOC1S3Q6QNY0 202 aa9.7□□□□□ -0.86
GTF3C3-205ENST00000448087 SKIV2LQ15477 1246 aaKnown RBP9.69□□□□□ -0.86
GTF3C3-205ENST00000448087 RSBN1LQ6PCB5 846 aaPredicted RBP9.69□□□□□ -0.86
GTF3C3-205ENST00000448087 RIC3Q7Z5B4 369 aa9.69□□□□□ -0.86
GTF3C3-205ENST00000448087 COPS2P61201 443 aa9.68□□□□□ -0.86
GTF3C3-205ENST00000448087 GOPCQ9HD26 462 aa9.68□□□□□ -0.86
GTF3C3-205ENST00000448087 LIMD1Q9UGP4 676 aa9.68□□□□□ -0.86
GTF3C3-205ENST00000448087 SPTLC1O15269 473 aa9.68□□□□□ -0.86
GTF3C3-205ENST00000448087 CLK2P49760 499 aaKnown RBP9.68□□□□□ -0.86
GTF3C3-205ENST00000448087 MTRQ99707 1265 aa9.68□□□□□ -0.86
GTF3C3-205ENST00000448087 SLC27A5Q9Y2P5 690 aa9.68□□□□□ -0.86
GTF3C3-205ENST00000448087 FDX1P10109 184 aa9.67□□□□□ -0.86
GTF3C3-205ENST00000448087 GJA5P36382 358 aa9.66□□□□□ -0.86
GTF3C3-205ENST00000448087 SCUBE3Q8IX30 993 aa9.66□□□□□ -0.86
GTF3C3-205ENST00000448087 PCDHGC3Q9UN70 934 aa9.66□□□□□ -0.86
GTF3C3-205ENST00000448087 NR1I2O75469 434 aa9.65□□□□□ -0.86
GTF3C3-205ENST00000448087 TJAP1Q5JTD0 557 aa9.65□□□□□ -0.86
GTF3C3-205ENST00000448087 PROCA1Q8NCQ7 364 aaPredicted RBP9.65□□□□□ -0.86
GTF3C3-205ENST00000448087 PCDHB15Q9Y5E8 787 aa9.65□□□□□ -0.86
GTF3C3-205ENST00000448087 CSPP1Q1MSJ5 1256 aa9.64□□□□□ -0.87
GTF3C3-205ENST00000448087 PCMTD1Q96MG8 357 aaPredicted RBP9.64□□□□□ -0.87
GTF3C3-205ENST00000448087 IL21Q9HBE4 155 aa9.63□□□□□ -0.87
GTF3C3-205ENST00000448087 ATP1B4Q9UN42 357 aaPredicted RBP9.63□□□□□ -0.87
GTF3C3-205ENST00000448087 TUSC1Q2TAM9 212 aa9.62□□□□□ -0.87
GTF3C3-205ENST00000448087 ZNF516Q92618 1163 aa9.62□□□□□ -0.87
GTF3C3-205ENST00000448087 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.62□□□□□ -0.87
GTF3C3-205ENST00000448087 ZPR1O75312 459 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms