RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 TMEM131LA2VDJ0 1609 aa36.16■■■■□ 3.38
MRPL28-205ENST00000447696 LRRC7Q96NW7 1537 aa36.15■■■■□ 3.38
MRPL28-205ENST00000447696 ZFYVE9O95405 1425 aa36.1■■■■□ 3.37
MRPL28-205ENST00000447696 SPHKAPQ2M3C7 1700 aa36.08■■■■□ 3.37
MRPL28-205ENST00000447696 MYO5BQ9ULV0 1848 aa36.06■■■■□ 3.36
MRPL28-205ENST00000447696 RIMS2Q9UQ26 1411 aa36.06■■■■□ 3.36
MRPL28-205ENST00000447696 HDGFP51858 240 aaKnown RBP36.05■■■■□ 3.36
MRPL28-205ENST00000447696 STRCP1A6NGW2 1772 aa36.03■■■■□ 3.36
MRPL28-205ENST00000447696 CHGAP10645 457 aaKnown RBP36.01■■■■□ 3.36
MRPL28-205ENST00000447696 TRIM52Q96A61 297 aa36.01■■■■□ 3.36
MRPL28-205ENST00000447696 PLEKHG1Q9ULL1 1385 aa36■■■■□ 3.35
MRPL28-205ENST00000447696 TRPM2O94759 1503 aa35.99■■■■□ 3.35
MRPL28-205ENST00000447696 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.99■■■■□ 3.35
MRPL28-205ENST00000447696 PPP1R15AO75807 674 aaPredicted RBP35.96■■■■□ 3.35
MRPL28-205ENST00000447696 SLC4A1APQ9BWU0 796 aaKnown RBP35.93■■■■□ 3.34
MRPL28-205ENST00000447696 SENP3Q9H4L4 574 aaPredicted RBP35.93■■■■□ 3.34
MRPL28-205ENST00000447696 SLC26A8Q96RN1 970 aa35.92■■■■□ 3.34
MRPL28-205ENST00000447696 CLTCL1P53675 1640 aa35.9■■■■□ 3.34
MRPL28-205ENST00000447696 ACIN1Q9UKV3 1341 aaKnown RBP35.89■■■■□ 3.34
MRPL28-205ENST00000447696 BCANQ96GW7 911 aa35.89■■■■□ 3.34
MRPL28-205ENST00000447696 KCNA6P17658 529 aa35.88■■■■□ 3.33
MRPL28-205ENST00000447696 NWD1Q149M9 1564 aa35.86■■■■□ 3.33
MRPL28-205ENST00000447696 FAM135BQ49AJ0 1406 aa35.86■■■■□ 3.33
MRPL28-205ENST00000447696 NKTRP30414 1462 aaKnown RBP35.83■■■■□ 3.33
MRPL28-205ENST00000447696 DIP2AQ14689 1571 aa35.83■■■■□ 3.33
MRPL28-205ENST00000447696 SETD5Q9C0A6 1442 aa35.83■■■■□ 3.33
MRPL28-205ENST00000447696 RGS17Q9UGC6 210 aaPredicted RBP35.82■■■■□ 3.32
MRPL28-205ENST00000447696 TBX22Q9Y458 520 aa35.82■■■■□ 3.32
MRPL28-205ENST00000447696 ADAMTS13Q76LX8 1427 aa35.8■■■■□ 3.32
MRPL28-205ENST00000447696 NUTM2DQ5VT03 806 aaPredicted RBP35.79■■■■□ 3.32
MRPL28-205ENST00000447696 KIF1BO60333 1816 aa35.78■■■■□ 3.32
MRPL28-205ENST00000447696 ZNF326Q5BKZ1 582 aaKnown RBP35.77■■■■□ 3.32
MRPL28-205ENST00000447696 XIRP1Q702N8 1843 aaKnown RBP35.76■■■■□ 3.31
MRPL28-205ENST00000447696 PIK3R4Q99570 1358 aa35.75■■■■□ 3.31
MRPL28-205ENST00000447696 MPHOSPH9Q99550 1183 aa35.74■■■■□ 3.31
MRPL28-205ENST00000447696 TMEM94Q12767 1356 aa35.74■■■■□ 3.31
MRPL28-205ENST00000447696 NEXMIFQ5QGS0 1516 aa35.73■■■■□ 3.31
MRPL28-205ENST00000447696 CHD2O14647 1828 aaKnown RBP35.73■■■■□ 3.31
MRPL28-205ENST00000447696 SETBP1Q9Y6X0 1596 aa35.72■■■■□ 3.31
MRPL28-205ENST00000447696 PROSER2Q86WR7 435 aaPredicted RBP35.71■■■■□ 3.31
MRPL28-205ENST00000447696 RAB3GAP2Q9H2M9 1393 aa35.67■■■■□ 3.3
MRPL28-205ENST00000447696 FOXD1Q16676 465 aa35.67■■■■□ 3.3
MRPL28-205ENST00000447696 NRXN3Q9Y4C0 1643 aa35.67■■■■□ 3.3
MRPL28-205ENST00000447696 CCDC144AA2RUR9 1427 aa35.65■■■■□ 3.3
MRPL28-205ENST00000447696 RPGRIP1LQ68CZ1 1315 aa35.63■■■■□ 3.29
MRPL28-205ENST00000447696 NCOA3Q9Y6Q9 1424 aa35.6■■■■□ 3.29
MRPL28-205ENST00000447696 POTEAQ6S8J7 498 aa35.6■■■■□ 3.29
MRPL28-205ENST00000447696 VGFO15240 615 aaPredicted RBP35.58■■■■□ 3.29
MRPL28-205ENST00000447696 MSH6P52701 1360 aa35.56■■■■□ 3.28
MRPL28-205ENST00000447696 PTPRUQ92729 1446 aa35.56■■■■□ 3.28
MRPL28-205ENST00000447696 ROBO1Q9Y6N7 1651 aa35.56■■■■□ 3.28
MRPL28-205ENST00000447696 RBM33Q96EV2 1170 aaKnown RBP35.55■■■■□ 3.28
MRPL28-205ENST00000447696 HRCP23327 699 aa35.54■■■■□ 3.28
MRPL28-205ENST00000447696 SPATA31E1Q6ZUB1 1445 aa35.53■■■■□ 3.28
MRPL28-205ENST00000447696 AMOTL2Q9Y2J4 779 aa35.53■■■■□ 3.28
MRPL28-205ENST00000447696 PPLO60437 1756 aa35.53■■■■□ 3.28
MRPL28-205ENST00000447696 XRN1Q8IZH2 1706 aaKnown RBP35.52■■■■□ 3.28
MRPL28-205ENST00000447696 METP08581 1390 aa35.51■■■■□ 3.27
MRPL28-205ENST00000447696 SLAIN2Q9P270 581 aa35.49■■■■□ 3.27
MRPL28-205ENST00000447696 JCADQ9P266 1359 aa35.47■■■■□ 3.27
MRPL28-205ENST00000447696 ANKRD30BQ9BXX2 1392 aa35.43■■■■□ 3.26
MRPL28-205ENST00000447696 SETD1AO15047 1707 aaKnown RBP35.42■■■■□ 3.26
MRPL28-205ENST00000447696 C14orf37Q86TY3 774 aa35.41■■■■□ 3.26
MRPL28-205ENST00000447696 C19orf44Q9H6X5 657 aa35.4■■■■□ 3.26
MRPL28-205ENST00000447696 IFT172Q9UG01 1749 aa35.4■■■■□ 3.26
MRPL28-205ENST00000447696 RGL3Q3MIN7 710 aa35.39■■■■□ 3.26
MRPL28-205ENST00000447696 PRAG1Q86YV5 1406 aa35.36■■■■□ 3.25
MRPL28-205ENST00000447696 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.36■■■■□ 3.25
MRPL28-205ENST00000447696 PHLPP1O60346 1717 aa35.35■■■■□ 3.25
MRPL28-205ENST00000447696 DCCP43146 1447 aa35.35■■■■□ 3.25
MRPL28-205ENST00000447696 CADPS2Q86UW7 1296 aa35.35■■■■□ 3.25
MRPL28-205ENST00000447696 ADGRF5Q8IZF2 1346 aa35.33■■■■□ 3.25
MRPL28-205ENST00000447696 PTCH1Q13635 1447 aa35.33■■■■□ 3.25
MRPL28-205ENST00000447696 SPATA31A6Q5VVP1 1343 aa35.32■■■■□ 3.25
MRPL28-205ENST00000447696 ATF3P18847 181 aa35.31■■■■□ 3.24
MRPL28-205ENST00000447696 ZNF772Q68DY9 489 aaPredicted RBP35.28■■■■□ 3.24
MRPL28-205ENST00000447696 PIK3C2GO75747 1445 aa35.28■■■■□ 3.24
MRPL28-205ENST00000447696 ADGRL3Q9HAR2 1447 aa35.27■■■■□ 3.24
MRPL28-205ENST00000447696 MYOM2P54296 1465 aa35.26■■■■□ 3.23
MRPL28-205ENST00000447696 COL16A1Q07092 1604 aaPredicted RBP35.24■■■■□ 3.23
MRPL28-205ENST00000447696 NRXN1Q9ULB1 1477 aa35.23■■■■□ 3.23
MRPL28-205ENST00000447696 ROBO2Q9HCK4 1378 aa35.23■■■■□ 3.23
MRPL28-205ENST00000447696 MEX3CQ5U5Q3 659 aaKnown RBP35.22■■■■□ 3.23
MRPL28-205ENST00000447696 NALCNQ8IZF0 1738 aa35.2■■■■□ 3.23
MRPL28-205ENST00000447696 TECPR2O15040 1411 aa35.17■■■■□ 3.22
MRPL28-205ENST00000447696 MST1RQ04912 1400 aa35.16■■■■□ 3.22
MRPL28-205ENST00000447696 ASXL1Q8IXJ9 1541 aa35.16■■■■□ 3.22
MRPL28-205ENST00000447696 LRPPRCP42704 1394 aaKnown RBP35.15■■■■□ 3.22
MRPL28-205ENST00000447696 AHDC1Q5TGY3 1603 aaPredicted RBP35.15■■■■□ 3.22
MRPL28-205ENST00000447696 LAMC1P11047 1609 aa35.14■■■■□ 3.22
MRPL28-205ENST00000447696 LRP6O75581 1613 aa35.13■■■■□ 3.21
MRPL28-205ENST00000447696 UPF1Q92900 1129 aaKnown RBP eCLIP35.12■■■■□ 3.21
MRPL28-205ENST00000447696 C14orf93Q9H972 538 aaKnown RBP35.12■■■■□ 3.21
MRPL28-205ENST00000447696 ABCC11Q96J66 1382 aa35.12■■■■□ 3.21
MRPL28-205ENST00000447696 KNDC1Q76NI1 1749 aa35.1■■■■□ 3.21
MRPL28-205ENST00000447696 BRINP3Q76B58 766 aa35.1■■■■□ 3.21
MRPL28-205ENST00000447696 SHPRHQ149N8 1683 aa35.08■■■■□ 3.21
MRPL28-205ENST00000447696 STAC3Q96MF2 364 aa35.08■■■■□ 3.21
MRPL28-205ENST00000447696 YTHDC2Q9H6S0 1430 aaKnown RBP35.07■■■■□ 3.21
MRPL28-205ENST00000447696 RXRBP28702 533 aa35.07■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms