RNA–Protein interactions for RNA: ENST00000447463.5

HDAC7-215, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-215ENST00000447463 ZFYVE9O95405 1425 aa20.32■□□□□ 0.84
HDAC7-215ENST00000447463 ROCK1Q13464 1354 aa20.32■□□□□ 0.84
HDAC7-215ENST00000447463 NKTRP30414 1462 aaKnown RBP20.31■□□□□ 0.84
HDAC7-215ENST00000447463 NWD1Q149M9 1564 aa20.31■□□□□ 0.84
HDAC7-215ENST00000447463 FAM135BQ49AJ0 1406 aa20.31■□□□□ 0.84
HDAC7-215ENST00000447463 PROSER2Q86WR7 435 aaPredicted RBP20.31■□□□□ 0.84
HDAC7-215ENST00000447463 TMEM131LA2VDJ0 1609 aa20.3■□□□□ 0.84
HDAC7-215ENST00000447463 HDGFP51858 240 aaKnown RBP20.29■□□□□ 0.84
HDAC7-215ENST00000447463 PLEKHG1Q9ULL1 1385 aa20.29■□□□□ 0.84
HDAC7-215ENST00000447463 RIMS2Q9UQ26 1411 aa20.28■□□□□ 0.84
HDAC7-215ENST00000447463 PPP1R15AO75807 674 aaPredicted RBP20.28■□□□□ 0.84
HDAC7-215ENST00000447463 E9PCH4 1651 aa20.28■□□□□ 0.84
HDAC7-215ENST00000447463 IQGAP3Q86VI3 1631 aa20.27■□□□□ 0.84
HDAC7-215ENST00000447463 RBM33Q96EV2 1170 aaKnown RBP20.27■□□□□ 0.84
HDAC7-215ENST00000447463 CHD2O14647 1828 aaKnown RBP20.25■□□□□ 0.83
HDAC7-215ENST00000447463 ROBO1Q9Y6N7 1651 aa20.25■□□□□ 0.83
HDAC7-215ENST00000447463 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.24■□□□□ 0.83
HDAC7-215ENST00000447463 MSH6P52701 1360 aa20.23■□□□□ 0.83
HDAC7-215ENST00000447463 CHGAP10645 457 aaKnown RBP20.23■□□□□ 0.83
HDAC7-215ENST00000447463 NUP155O75694 1391 aa20.22■□□□□ 0.83
HDAC7-215ENST00000447463 ITGAEP38570 1179 aa20.22■□□□□ 0.83
HDAC7-215ENST00000447463 TBX22Q9Y458 520 aa20.21■□□□□ 0.83
HDAC7-215ENST00000447463 DIP2AQ14689 1571 aa20.18■□□□□ 0.82
HDAC7-215ENST00000447463 SLAIN2Q9P270 581 aa20.18■□□□□ 0.82
HDAC7-215ENST00000447463 NUTM2DQ5VT03 806 aaPredicted RBP20.17■□□□□ 0.82
HDAC7-215ENST00000447463 PPARGC1BQ86YN6 1023 aaKnown RBP20.17■□□□□ 0.82
HDAC7-215ENST00000447463 ADAMTS13Q76LX8 1427 aa20.17■□□□□ 0.82
HDAC7-215ENST00000447463 RGS17Q9UGC6 210 aaPredicted RBP20.16■□□□□ 0.82
HDAC7-215ENST00000447463 NCOA3Q9Y6Q9 1424 aa20.16■□□□□ 0.82
HDAC7-215ENST00000447463 PIK3R4Q99570 1358 aa20.14■□□□□ 0.81
HDAC7-215ENST00000447463 PHLPP1O60346 1717 aa20.13■□□□□ 0.81
HDAC7-215ENST00000447463 C14orf37Q86TY3 774 aa20.12■□□□□ 0.81
HDAC7-215ENST00000447463 SPHKAPQ2M3C7 1700 aa20.12■□□□□ 0.81
HDAC7-215ENST00000447463 TRPM2O94759 1503 aa20.12■□□□□ 0.81
HDAC7-215ENST00000447463 C19orf44Q9H6X5 657 aa20.09■□□□□ 0.81
HDAC7-215ENST00000447463 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.09■□□□□ 0.81
HDAC7-215ENST00000447463 CADPS2Q86UW7 1296 aa20.08■□□□□ 0.81
HDAC7-215ENST00000447463 JCADQ9P266 1359 aa20.08■□□□□ 0.8
HDAC7-215ENST00000447463 AMOTL2Q9Y2J4 779 aa20.07■□□□□ 0.8
HDAC7-215ENST00000447463 ATF3P18847 181 aa20.06■□□□□ 0.8
HDAC7-215ENST00000447463 PTPRUQ92729 1446 aa20.06■□□□□ 0.8
HDAC7-215ENST00000447463 COL16A1Q07092 1604 aaPredicted RBP20.05■□□□□ 0.8
HDAC7-215ENST00000447463 NRXN3Q9Y4C0 1643 aa20.05■□□□□ 0.8
HDAC7-215ENST00000447463 SETBP1Q9Y6X0 1596 aa20.05■□□□□ 0.8
HDAC7-215ENST00000447463 RRBP1Q9P2E9 1410 aaKnown RBP20.05■□□□□ 0.8
HDAC7-215ENST00000447463 ZNF326Q5BKZ1 582 aaKnown RBP20.05■□□□□ 0.8
HDAC7-215ENST00000447463 POTEAQ6S8J7 498 aa20.04■□□□□ 0.8
HDAC7-215ENST00000447463 XRN1Q8IZH2 1706 aaKnown RBP20.02■□□□□ 0.8
HDAC7-215ENST00000447463 CLTCL1P53675 1640 aa20.02■□□□□ 0.79
HDAC7-215ENST00000447463 AHDC1Q5TGY3 1603 aaPredicted RBP20.02■□□□□ 0.79
HDAC7-215ENST00000447463 NAIPQ13075 1403 aa20.02■□□□□ 0.79
HDAC7-215ENST00000447463 DCCP43146 1447 aa20.01■□□□□ 0.79
HDAC7-215ENST00000447463 NEXMIFQ5QGS0 1516 aa19.98■□□□□ 0.79
HDAC7-215ENST00000447463 KIF1BO60333 1816 aa19.98■□□□□ 0.79
HDAC7-215ENST00000447463 SPATA31A6Q5VVP1 1343 aa19.98■□□□□ 0.79
HDAC7-215ENST00000447463 METP08581 1390 aa19.97■□□□□ 0.79
HDAC7-215ENST00000447463 BRINP3Q76B58 766 aa19.97■□□□□ 0.79
HDAC7-215ENST00000447463 SHPRHQ149N8 1683 aa19.96■□□□□ 0.79
HDAC7-215ENST00000447463 LRP6O75581 1613 aa19.94■□□□□ 0.78
HDAC7-215ENST00000447463 HFM1A2PYH4 1435 aa19.93■□□□□ 0.78
HDAC7-215ENST00000447463 MEX3CQ5U5Q3 659 aaKnown RBP19.93■□□□□ 0.78
HDAC7-215ENST00000447463 ASXL1Q8IXJ9 1541 aa19.92■□□□□ 0.78
HDAC7-215ENST00000447463 TRIM52Q96A61 297 aa19.92■□□□□ 0.78
HDAC7-215ENST00000447463 MST1RQ04912 1400 aa19.92■□□□□ 0.78
HDAC7-215ENST00000447463 ADGRL3Q9HAR2 1447 aa19.91■□□□□ 0.78
HDAC7-215ENST00000447463 VGFO15240 615 aaPredicted RBP19.89■□□□□ 0.77
HDAC7-215ENST00000447463 NHSL1Q5SYE7 1610 aa19.89■□□□□ 0.77
HDAC7-215ENST00000447463 ZNF772Q68DY9 489 aaPredicted RBP19.89■□□□□ 0.77
HDAC7-215ENST00000447463 NALCNQ8IZF0 1738 aa19.89■□□□□ 0.77
HDAC7-215ENST00000447463 SLC4A1APQ9BWU0 796 aaKnown RBP19.89■□□□□ 0.77
HDAC7-215ENST00000447463 SETD1AO15047 1707 aaKnown RBP19.88■□□□□ 0.77
HDAC7-215ENST00000447463 SETD5Q9C0A6 1442 aa19.87■□□□□ 0.77
HDAC7-215ENST00000447463 RPGRIP1LQ68CZ1 1315 aa19.86■□□□□ 0.77
HDAC7-215ENST00000447463 PTCH1Q13635 1447 aa19.85■□□□□ 0.77
HDAC7-215ENST00000447463 NUTM2BA6NNL0 878 aaPredicted RBP19.84■□□□□ 0.77
HDAC7-215ENST00000447463 NUTM2EB1AL46 878 aaPredicted RBP19.84■□□□□ 0.77
HDAC7-215ENST00000447463 NUTM2AQ8IVF1 878 aaPredicted RBP19.84■□□□□ 0.77
HDAC7-215ENST00000447463 LRRC59Q96AG4 307 aaKnown RBP19.84■□□□□ 0.77
HDAC7-215ENST00000447463 PPLO60437 1756 aa19.83■□□□□ 0.77
HDAC7-215ENST00000447463 ROBO2Q9HCK4 1378 aa19.82■□□□□ 0.76
HDAC7-215ENST00000447463 DDX17Q92841 729 aaKnown RBP19.81■□□□□ 0.76
HDAC7-215ENST00000447463 PRAG1Q86YV5 1406 aa19.81■□□□□ 0.76
HDAC7-215ENST00000447463 C1orf167Q5SNV9 1468 aa19.8■□□□□ 0.76
HDAC7-215ENST00000447463 FOXD1Q16676 465 aa19.78■□□□□ 0.76
HDAC7-215ENST00000447463 PNPLA6Q8IY17 1366 aa19.78■□□□□ 0.76
HDAC7-215ENST00000447463 LAMC1P11047 1609 aa19.77■□□□□ 0.76
HDAC7-215ENST00000447463 RXRBP28702 533 aa19.77■□□□□ 0.76
HDAC7-215ENST00000447463 AFF2P51816 1311 aa19.76■□□□□ 0.75
HDAC7-215ENST00000447463 CCDC144AA2RUR9 1427 aa19.76■□□□□ 0.75
HDAC7-215ENST00000447463 ORAI2Q96SN7 254 aa19.74■□□□□ 0.75
HDAC7-215ENST00000447463 CDK12Q9NYV4 1490 aaPredicted RBP19.73■□□□□ 0.75
HDAC7-215ENST00000447463 C8orf37Q96NL8 207 aa19.73■□□□□ 0.75
HDAC7-215ENST00000447463 SOS2Q07890 1332 aaPredicted RBP19.72■□□□□ 0.75
HDAC7-215ENST00000447463 SPATA31E1Q6ZUB1 1445 aa19.71■□□□□ 0.75
HDAC7-215ENST00000447463 RGL3Q3MIN7 710 aa19.71■□□□□ 0.75
HDAC7-215ENST00000447463 MPHOSPH9Q99550 1183 aa19.71■□□□□ 0.75
HDAC7-215ENST00000447463 ADGRF5Q8IZF2 1346 aa19.71■□□□□ 0.75
HDAC7-215ENST00000447463 ANKRD30BQ9BXX2 1392 aa19.7■□□□□ 0.74
HDAC7-215ENST00000447463 UPF1Q92900 1129 aaKnown RBP eCLIP19.7■□□□□ 0.74
HDAC7-215ENST00000447463 IFT172Q9UG01 1749 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms