RNA–Protein interactions for RNA: ENST00000447456.1

CCDC18-205, Transcript of coiled-coil domain containing 18, humanhuman

TSL 1 (best)

Gene CCDC18, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-205ENST00000447456 ZNF142P52746 1687 aaPredicted RBP13.28□□□□□ -0.28
CCDC18-205ENST00000447456 ZEB1P37275 1124 aaPredicted RBP13.28□□□□□ -0.28
CCDC18-205ENST00000447456 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.27□□□□□ -0.29
CCDC18-205ENST00000447456 UBR1Q8IWV7 1749 aa13.26□□□□□ -0.29
CCDC18-205ENST00000447456 EID1Q9Y6B2 187 aa13.26□□□□□ -0.29
CCDC18-205ENST00000447456 TMEM2Q9UHN6 1383 aa13.25□□□□□ -0.29
CCDC18-205ENST00000447456 VGFO15240 615 aaPredicted RBP13.25□□□□□ -0.29
CCDC18-205ENST00000447456 L3MBTL2Q969R5 705 aa13.25□□□□□ -0.29
CCDC18-205ENST00000447456 DCAF11Q8TEB1 546 aa13.24□□□□□ -0.29
CCDC18-205ENST00000447456 RIMS2Q9UQ26 1411 aa13.23□□□□□ -0.29
CCDC18-205ENST00000447456 MYO5BQ9ULV0 1848 aa13.23□□□□□ -0.29
CCDC18-205ENST00000447456 PPP1R15AO75807 674 aaPredicted RBP13.23□□□□□ -0.29
CCDC18-205ENST00000447456 ANKLE2Q86XL3 938 aa13.22□□□□□ -0.29
CCDC18-205ENST00000447456 KDM2AQ9Y2K7 1162 aa13.22□□□□□ -0.29
CCDC18-205ENST00000447456 SLIT1O75093 1534 aa13.22□□□□□ -0.29
CCDC18-205ENST00000447456 ZFYVE9O95405 1425 aa13.22□□□□□ -0.29
CCDC18-205ENST00000447456 TXNDC2Q86VQ3 553 aa13.21□□□□□ -0.29
CCDC18-205ENST00000447456 ARHGAP23Q9P227 1491 aa13.21□□□□□ -0.3
CCDC18-205ENST00000447456 NEXMIFQ5QGS0 1516 aa13.2□□□□□ -0.3
CCDC18-205ENST00000447456 MYOM2P54296 1465 aa13.2□□□□□ -0.3
CCDC18-205ENST00000447456 LMTK3Q96Q04 1460 aa13.2□□□□□ -0.3
CCDC18-205ENST00000447456 PPLO60437 1756 aa13.2□□□□□ -0.3
CCDC18-205ENST00000447456 IFT172Q9UG01 1749 aa13.19□□□□□ -0.3
CCDC18-205ENST00000447456 SCAF11Q99590 1463 aaKnown RBP13.18□□□□□ -0.3
CCDC18-205ENST00000447456 BCANQ96GW7 911 aa13.18□□□□□ -0.3
CCDC18-205ENST00000447456 LTKP29376 864 aa13.16□□□□□ -0.3
CCDC18-205ENST00000447456 NUTM2DQ5VT03 806 aaPredicted RBP13.16□□□□□ -0.3
CCDC18-205ENST00000447456 PLEKHG1Q9ULL1 1385 aa13.16□□□□□ -0.3
CCDC18-205ENST00000447456 ADGRF5Q8IZF2 1346 aa13.15□□□□□ -0.3
CCDC18-205ENST00000447456 PRAG1Q86YV5 1406 aa13.15□□□□□ -0.3
CCDC18-205ENST00000447456 HSPA2P54652 639 aa13.15□□□□□ -0.3
CCDC18-205ENST00000447456 NRXN1Q9ULB1 1477 aa13.15□□□□□ -0.3
CCDC18-205ENST00000447456 PIK3C2GO75747 1445 aa13.13□□□□□ -0.31
CCDC18-205ENST00000447456 POLR1AO95602 1720 aaPredicted RBP13.13□□□□□ -0.31
CCDC18-205ENST00000447456 NCKAP5LQ9HCH0 1330 aa13.13□□□□□ -0.31
CCDC18-205ENST00000447456 MED14O60244 1454 aa13.12□□□□□ -0.31
CCDC18-205ENST00000447456 C14orf93Q9H972 538 aaKnown RBP13.12□□□□□ -0.31
CCDC18-205ENST00000447456 DMRT2Q9Y5R5 561 aa13.12□□□□□ -0.31
CCDC18-205ENST00000447456 LAMC1P11047 1609 aa13.12□□□□□ -0.31
CCDC18-205ENST00000447456 NPHP4O75161 1426 aaPredicted RBP13.12□□□□□ -0.31
CCDC18-205ENST00000447456 SETBP1Q9Y6X0 1596 aa13.11□□□□□ -0.31
CCDC18-205ENST00000447456 DIP2AQ14689 1571 aa13.11□□□□□ -0.31
CCDC18-205ENST00000447456 KIAA1210Q9ULL0 1709 aa13.1□□□□□ -0.31
CCDC18-205ENST00000447456 NBPF8Q3BBV2 869 aa13.1□□□□□ -0.31
CCDC18-205ENST00000447456 TBX22Q9Y458 520 aa13.1□□□□□ -0.31
CCDC18-205ENST00000447456 ROCK2O75116 1388 aaKnown RBP13.09□□□□□ -0.31
CCDC18-205ENST00000447456 CFAP70Q5T0N1 1121 aa13.09□□□□□ -0.31
CCDC18-205ENST00000447456 ALKQ9UM73 1620 aa13.09□□□□□ -0.31
CCDC18-205ENST00000447456 RALGAPBQ86X10 1494 aa13.09□□□□□ -0.31
CCDC18-205ENST00000447456 IQGAP1P46940 1657 aa13.08□□□□□ -0.31
CCDC18-205ENST00000447456 PIK3R4Q99570 1358 aa13.07□□□□□ -0.32
CCDC18-205ENST00000447456 TRPM1Q7Z4N2 1603 aa13.07□□□□□ -0.32
CCDC18-205ENST00000447456 SLC26A8Q96RN1 970 aa13.07□□□□□ -0.32
CCDC18-205ENST00000447456 ADAMTS13Q76LX8 1427 aa13.06□□□□□ -0.32
CCDC18-205ENST00000447456 CARD11Q9BXL7 1154 aa13.06□□□□□ -0.32
CCDC18-205ENST00000447456 GPRASP1Q5JY77 1395 aa13.06□□□□□ -0.32
CCDC18-205ENST00000447456 NRXN3Q9Y4C0 1643 aa13.06□□□□□ -0.32
CCDC18-205ENST00000447456 STRCQ7RTU9 1775 aa13.05□□□□□ -0.32
CCDC18-205ENST00000447456 NBPF1Q3BBV0 1214 aa13.04□□□□□ -0.32
CCDC18-205ENST00000447456 TMEM132EQ6IEE7 984 aa13.03□□□□□ -0.32
CCDC18-205ENST00000447456 EIF3AQ14152 1382 aaKnown RBP13.03□□□□□ -0.32
CCDC18-205ENST00000447456 METP08581 1390 aa13.02□□□□□ -0.33
CCDC18-205ENST00000447456 LRPPRCP42704 1394 aaKnown RBP13.02□□□□□ -0.33
CCDC18-205ENST00000447456 YTHDC2Q9H6S0 1430 aaKnown RBP13.02□□□□□ -0.33
CCDC18-205ENST00000447456 ADGRB1O14514 1584 aa13.02□□□□□ -0.33
CCDC18-205ENST00000447456 SETD1AO15047 1707 aaKnown RBP13.02□□□□□ -0.33
CCDC18-205ENST00000447456 STK26Q9P289 416 aa13.01□□□□□ -0.33
CCDC18-205ENST00000447456 ABCC11Q96J66 1382 aa13□□□□□ -0.33
CCDC18-205ENST00000447456 KCNA6P17658 529 aa13□□□□□ -0.33
CCDC18-205ENST00000447456 EIF4G2P78344 907 aaKnown RBP eCLIP13□□□□□ -0.33
CCDC18-205ENST00000447456 USP47Q96K76 1375 aa12.99□□□□□ -0.33
CCDC18-205ENST00000447456 SLC24A1O60721 1099 aa12.99□□□□□ -0.33
CCDC18-205ENST00000447456 SIRT1Q96EB6 747 aa12.99□□□□□ -0.33
CCDC18-205ENST00000447456 TRAK1Q9UPV9 953 aa12.99□□□□□ -0.33
CCDC18-205ENST00000447456 AMOTL2Q9Y2J4 779 aa12.99□□□□□ -0.33
CCDC18-205ENST00000447456 ASXL1Q8IXJ9 1541 aa12.98□□□□□ -0.33
CCDC18-205ENST00000447456 POGKQ9P215 609 aa12.98□□□□□ -0.33
CCDC18-205ENST00000447456 TECPR2O15040 1411 aa12.97□□□□□ -0.33
CCDC18-205ENST00000447456 DLC1Q96QB1 1528 aa12.97□□□□□ -0.33
CCDC18-205ENST00000447456 CHD2O14647 1828 aaKnown RBP12.97□□□□□ -0.33
CCDC18-205ENST00000447456 PTCH1Q13635 1447 aa12.96□□□□□ -0.33
CCDC18-205ENST00000447456 FAM135BQ49AJ0 1406 aa12.96□□□□□ -0.33
CCDC18-205ENST00000447456 NKTRP30414 1462 aaKnown RBP12.96□□□□□ -0.34
CCDC18-205ENST00000447456 KNDC1Q76NI1 1749 aa12.96□□□□□ -0.34
CCDC18-205ENST00000447456 PTPRUQ92729 1446 aa12.96□□□□□ -0.34
CCDC18-205ENST00000447456 NWD1Q149M9 1564 aa12.95□□□□□ -0.34
CCDC18-205ENST00000447456 CENPJQ9HC77 1338 aaPredicted RBP12.95□□□□□ -0.34
CCDC18-205ENST00000447456 CPS1P31327 1500 aa12.95□□□□□ -0.34
CCDC18-205ENST00000447456 PRAM1Q96QH2 718 aa12.95□□□□□ -0.34
CCDC18-205ENST00000447456 XRN1Q8IZH2 1706 aaKnown RBP12.95□□□□□ -0.34
CCDC18-205ENST00000447456 PROSER2Q86WR7 435 aaPredicted RBP12.94□□□□□ -0.34
CCDC18-205ENST00000447456 ST20-MTHFSA0A0A6YYL1 179 aa12.93□□□□□ -0.34
CCDC18-205ENST00000447456 HSPA5P11021 654 aaKnown RBP12.93□□□□□ -0.34
CCDC18-205ENST00000447456 ROBO2Q9HCK4 1378 aa12.93□□□□□ -0.34
CCDC18-205ENST00000447456 ARHGEF28Q8N1W1 1705 aaKnown RBP12.92□□□□□ -0.34
CCDC18-205ENST00000447456 ZNF335Q9H4Z2 1342 aaPredicted RBP12.91□□□□□ -0.34
CCDC18-205ENST00000447456 NCOA3Q9Y6Q9 1424 aa12.91□□□□□ -0.34
CCDC18-205ENST00000447456 WAPLQ7Z5K2 1190 aa12.91□□□□□ -0.34
CCDC18-205ENST00000447456 C14orf37Q86TY3 774 aa12.91□□□□□ -0.34
CCDC18-205ENST00000447456 SBNO2Q9Y2G9 1366 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms