RNA–Protein interactions for RNA: ENST00000447261.6

BCRP3-201, Transcript of breakpoint cluster region pseudogene 3, humanhuman

TSL 2

Gene BCRP3, Length 1,457 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCRP3-201ENST00000447261 CHGAP10645 457 aaKnown RBP23.66■■□□□ 1.38
BCRP3-201ENST00000447261 SLC26A8Q96RN1 970 aa23.66■■□□□ 1.38
BCRP3-201ENST00000447261 SENP3Q9H4L4 574 aaPredicted RBP23.66■■□□□ 1.38
BCRP3-201ENST00000447261 MYO5BQ9ULV0 1848 aa23.65■■□□□ 1.38
BCRP3-201ENST00000447261 HSPA1LP34931 641 aa23.65■■□□□ 1.38
BCRP3-201ENST00000447261 CLSPNQ9HAW4 1339 aa23.63■■□□□ 1.37
BCRP3-201ENST00000447261 PPP1R15AO75807 674 aaPredicted RBP23.62■■□□□ 1.37
BCRP3-201ENST00000447261 ALKQ9UM73 1620 aa23.61■■□□□ 1.37
BCRP3-201ENST00000447261 TMEM131LA2VDJ0 1609 aa23.6■■□□□ 1.37
BCRP3-201ENST00000447261 SETD5Q9C0A6 1442 aa23.6■■□□□ 1.37
BCRP3-201ENST00000447261 RIMS2Q9UQ26 1411 aa23.6■■□□□ 1.37
BCRP3-201ENST00000447261 HDGFP51858 240 aaKnown RBP23.59■■□□□ 1.37
BCRP3-201ENST00000447261 ZFYVE9O95405 1425 aa23.58■■□□□ 1.37
BCRP3-201ENST00000447261 KCNA6P17658 529 aa23.58■■□□□ 1.37
BCRP3-201ENST00000447261 XIRP1Q702N8 1843 aaKnown RBP23.56■■□□□ 1.36
BCRP3-201ENST00000447261 ILDR2Q71H61 639 aa23.56■■□□□ 1.36
BCRP3-201ENST00000447261 PLEKHG1Q9ULL1 1385 aa23.55■■□□□ 1.36
BCRP3-201ENST00000447261 NUTM2DQ5VT03 806 aaPredicted RBP23.55■■□□□ 1.36
BCRP3-201ENST00000447261 PROSER2Q86WR7 435 aaPredicted RBP23.54■■□□□ 1.36
BCRP3-201ENST00000447261 TMEM94Q12767 1356 aa23.53■■□□□ 1.36
BCRP3-201ENST00000447261 RAB3GAP2Q9H2M9 1393 aa23.53■■□□□ 1.36
BCRP3-201ENST00000447261 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.53■■□□□ 1.36
BCRP3-201ENST00000447261 RBM33Q96EV2 1170 aaKnown RBP23.53■■□□□ 1.36
BCRP3-201ENST00000447261 DHX57Q6P158 1386 aaKnown RBP23.53■■□□□ 1.36
BCRP3-201ENST00000447261 NAIPQ13075 1403 aa23.5■■□□□ 1.35
BCRP3-201ENST00000447261 SPHKAPQ2M3C7 1700 aa23.49■■□□□ 1.35
BCRP3-201ENST00000447261 NWD1Q149M9 1564 aa23.48■■□□□ 1.35
BCRP3-201ENST00000447261 NKTRP30414 1462 aaKnown RBP23.48■■□□□ 1.35
BCRP3-201ENST00000447261 HFM1A2PYH4 1435 aa23.47■■□□□ 1.35
BCRP3-201ENST00000447261 TRIM52Q96A61 297 aa23.45■■□□□ 1.34
BCRP3-201ENST00000447261 TBX22Q9Y458 520 aa23.45■■□□□ 1.34
BCRP3-201ENST00000447261 CHD2O14647 1828 aaKnown RBP23.44■■□□□ 1.34
BCRP3-201ENST00000447261 MED1Q15648 1581 aaPredicted RBP23.44■■□□□ 1.34
BCRP3-201ENST00000447261 ZNF326Q5BKZ1 582 aaKnown RBP23.43■■□□□ 1.34
BCRP3-201ENST00000447261 ADAMTS13Q76LX8 1427 aa23.42■■□□□ 1.34
BCRP3-201ENST00000447261 MSH6P52701 1360 aa23.41■■□□□ 1.34
BCRP3-201ENST00000447261 ACIN1Q9UKV3 1341 aaKnown RBP23.41■■□□□ 1.34
BCRP3-201ENST00000447261 DIP2AQ14689 1571 aa23.39■■□□□ 1.34
BCRP3-201ENST00000447261 FAM135BQ49AJ0 1406 aa23.38■■□□□ 1.33
BCRP3-201ENST00000447261 CLTCL1P53675 1640 aa23.38■■□□□ 1.33
BCRP3-201ENST00000447261 C14orf37Q86TY3 774 aa23.37■■□□□ 1.33
BCRP3-201ENST00000447261 SOCS7O14512 581 aa23.36■■□□□ 1.33
BCRP3-201ENST00000447261 TRPM2O94759 1503 aa23.36■■□□□ 1.33
BCRP3-201ENST00000447261 PHF23Q9BUL5 403 aaPredicted RBP23.35■■□□□ 1.33
BCRP3-201ENST00000447261 SLC4A1APQ9BWU0 796 aaKnown RBP23.35■■□□□ 1.33
BCRP3-201ENST00000447261 ROBO1Q9Y6N7 1651 aa23.35■■□□□ 1.33
BCRP3-201ENST00000447261 PIK3R4Q99570 1358 aa23.34■■□□□ 1.33
BCRP3-201ENST00000447261 KIF1BO60333 1816 aa23.33■■□□□ 1.33
BCRP3-201ENST00000447261 AMOTL2Q9Y2J4 779 aa23.32■■□□□ 1.32
BCRP3-201ENST00000447261 SLAIN2Q9P270 581 aa23.31■■□□□ 1.32
BCRP3-201ENST00000447261 NRXN3Q9Y4C0 1643 aa23.3■■□□□ 1.32
BCRP3-201ENST00000447261 PTPRUQ92729 1446 aa23.3■■□□□ 1.32
BCRP3-201ENST00000447261 SETBP1Q9Y6X0 1596 aa23.29■■□□□ 1.32
BCRP3-201ENST00000447261 NCOA3Q9Y6Q9 1424 aa23.29■■□□□ 1.32
BCRP3-201ENST00000447261 NEXMIFQ5QGS0 1516 aa23.29■■□□□ 1.32
BCRP3-201ENST00000447261 FOXD1Q16676 465 aa23.26■■□□□ 1.31
BCRP3-201ENST00000447261 ATF3P18847 181 aa23.25■■□□□ 1.31
BCRP3-201ENST00000447261 C19orf44Q9H6X5 657 aa23.25■■□□□ 1.31
BCRP3-201ENST00000447261 METP08581 1390 aa23.24■■□□□ 1.31
BCRP3-201ENST00000447261 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.24■■□□□ 1.31
BCRP3-201ENST00000447261 CADPS2Q86UW7 1296 aa23.24■■□□□ 1.31
BCRP3-201ENST00000447261 PHLPP1O60346 1717 aa23.22■■□□□ 1.31
BCRP3-201ENST00000447261 XRN1Q8IZH2 1706 aaKnown RBP23.22■■□□□ 1.31
BCRP3-201ENST00000447261 VGFO15240 615 aaPredicted RBP23.2■■□□□ 1.3
BCRP3-201ENST00000447261 TIMELESSQ9UNS1 1208 aa23.18■■□□□ 1.3
BCRP3-201ENST00000447261 MPHOSPH9Q99550 1183 aa23.17■■□□□ 1.3
BCRP3-201ENST00000447261 RPGRIP1LQ68CZ1 1315 aa23.17■■□□□ 1.3
BCRP3-201ENST00000447261 CCDC144AA2RUR9 1427 aa23.15■■□□□ 1.3
BCRP3-201ENST00000447261 PPLO60437 1756 aa23.14■■□□□ 1.29
BCRP3-201ENST00000447261 JCADQ9P266 1359 aa23.13■■□□□ 1.29
BCRP3-201ENST00000447261 DCCP43146 1447 aa23.13■■□□□ 1.29
BCRP3-201ENST00000447261 RGL3Q3MIN7 710 aa23.11■■□□□ 1.29
BCRP3-201ENST00000447261 RGS17Q9UGC6 210 aaPredicted RBP23.11■■□□□ 1.29
BCRP3-201ENST00000447261 COL16A1Q07092 1604 aaPredicted RBP23.11■■□□□ 1.29
BCRP3-201ENST00000447261 BRINP3Q76B58 766 aa23.11■■□□□ 1.29
BCRP3-201ENST00000447261 SETD1AO15047 1707 aaKnown RBP23.1■■□□□ 1.29
BCRP3-201ENST00000447261 ADGRL3Q9HAR2 1447 aa23.09■■□□□ 1.29
BCRP3-201ENST00000447261 AHDC1Q5TGY3 1603 aaPredicted RBP23.08■■□□□ 1.29
BCRP3-201ENST00000447261 MST1RQ04912 1400 aa23.07■■□□□ 1.28
BCRP3-201ENST00000447261 NALCNQ8IZF0 1738 aa23.07■■□□□ 1.28
BCRP3-201ENST00000447261 ADGRF5Q8IZF2 1346 aa23.06■■□□□ 1.28
BCRP3-201ENST00000447261 PTCH1Q13635 1447 aa23.06■■□□□ 1.28
BCRP3-201ENST00000447261 ROBO2Q9HCK4 1378 aa23.05■■□□□ 1.28
BCRP3-201ENST00000447261 ASXL1Q8IXJ9 1541 aa23.05■■□□□ 1.28
BCRP3-201ENST00000447261 SPATA31E1Q6ZUB1 1445 aa23.04■■□□□ 1.28
BCRP3-201ENST00000447261 ZNF316A6NFI3 1004 aaPredicted RBP23.02■■□□□ 1.28
BCRP3-201ENST00000447261 ANKRD30BQ9BXX2 1392 aa23.01■■□□□ 1.27
BCRP3-201ENST00000447261 MEX3CQ5U5Q3 659 aaKnown RBP23.01■■□□□ 1.27
BCRP3-201ENST00000447261 POTEAQ6S8J7 498 aa23.01■■□□□ 1.27
BCRP3-201ENST00000447261 SPATA31A6Q5VVP1 1343 aa23.01■■□□□ 1.27
BCRP3-201ENST00000447261 SIN3AQ96ST3 1273 aa23■■□□□ 1.27
BCRP3-201ENST00000447261 IFT172Q9UG01 1749 aa22.99■■□□□ 1.27
BCRP3-201ENST00000447261 DDX17Q92841 729 aaKnown RBP22.98■■□□□ 1.27
BCRP3-201ENST00000447261 STK26Q9P289 416 aa22.98■■□□□ 1.27
BCRP3-201ENST00000447261 SHPRHQ149N8 1683 aa22.98■■□□□ 1.27
BCRP3-201ENST00000447261 LRP6O75581 1613 aa22.98■■□□□ 1.27
BCRP3-201ENST00000447261 PRAG1Q86YV5 1406 aa22.97■■□□□ 1.27
BCRP3-201ENST00000447261 C1orf167Q5SNV9 1468 aa22.97■■□□□ 1.27
BCRP3-201ENST00000447261 NHSL1Q5SYE7 1610 aa22.96■■□□□ 1.27
BCRP3-201ENST00000447261 NUTM2BA6NNL0 878 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms