RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 SLIT1O75093 1534 aa25.98■■□□□ 1.75
TRAPPC4-203ENST00000447216 TMEM2Q9UHN6 1383 aa25.98■■□□□ 1.75
TRAPPC4-203ENST00000447216 HSPA2P54652 639 aa25.98■■□□□ 1.75
TRAPPC4-203ENST00000447216 ARHGAP23Q9P227 1491 aa25.98■■□□□ 1.75
TRAPPC4-203ENST00000447216 ZFYVE9O95405 1425 aa25.97■■□□□ 1.75
TRAPPC4-203ENST00000447216 KDM2AQ9Y2K7 1162 aa25.97■■□□□ 1.75
TRAPPC4-203ENST00000447216 DCAF11Q8TEB1 546 aa25.96■■□□□ 1.75
TRAPPC4-203ENST00000447216 RPGRIP1LQ68CZ1 1315 aa25.95■■□□□ 1.75
TRAPPC4-203ENST00000447216 POLR1AO95602 1720 aaPredicted RBP25.94■■□□□ 1.74
TRAPPC4-203ENST00000447216 SENP3Q9H4L4 574 aaPredicted RBP25.93■■□□□ 1.74
TRAPPC4-203ENST00000447216 LTKP29376 864 aa25.91■■□□□ 1.74
TRAPPC4-203ENST00000447216 TXNDC2Q86VQ3 553 aa25.9■■□□□ 1.74
TRAPPC4-203ENST00000447216 ADGRF5Q8IZF2 1346 aa25.89■■□□□ 1.74
TRAPPC4-203ENST00000447216 PPP1R15AO75807 674 aaPredicted RBP25.89■■□□□ 1.74
TRAPPC4-203ENST00000447216 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.89■■□□□ 1.74
TRAPPC4-203ENST00000447216 MYOM2P54296 1465 aa25.89■■□□□ 1.73
TRAPPC4-203ENST00000447216 SCAF11Q99590 1463 aaKnown RBP25.89■■□□□ 1.73
TRAPPC4-203ENST00000447216 TIMELESSQ9UNS1 1208 aa25.88■■□□□ 1.73
TRAPPC4-203ENST00000447216 EID1Q9Y6B2 187 aa25.88■■□□□ 1.73
TRAPPC4-203ENST00000447216 STRCQ7RTU9 1775 aa25.87■■□□□ 1.73
TRAPPC4-203ENST00000447216 NCKAP5LQ9HCH0 1330 aa25.87■■□□□ 1.73
TRAPPC4-203ENST00000447216 VGFO15240 615 aaPredicted RBP25.86■■□□□ 1.73
TRAPPC4-203ENST00000447216 HDGFP51858 240 aaKnown RBP25.86■■□□□ 1.73
TRAPPC4-203ENST00000447216 ANKLE2Q86XL3 938 aa25.86■■□□□ 1.73
TRAPPC4-203ENST00000447216 IQGAP1P46940 1657 aa25.86■■□□□ 1.73
TRAPPC4-203ENST00000447216 NRXN1Q9ULB1 1477 aa25.84■■□□□ 1.73
TRAPPC4-203ENST00000447216 NRXN3Q9Y4C0 1643 aa25.83■■□□□ 1.73
TRAPPC4-203ENST00000447216 PRAG1Q86YV5 1406 aa25.82■■□□□ 1.72
TRAPPC4-203ENST00000447216 NBPF8Q3BBV2 869 aa25.82■■□□□ 1.72
TRAPPC4-203ENST00000447216 PLEKHG1Q9ULL1 1385 aa25.81■■□□□ 1.72
TRAPPC4-203ENST00000447216 STAC3Q96MF2 364 aa25.8■■□□□ 1.72
TRAPPC4-203ENST00000447216 PIK3C2GO75747 1445 aa25.8■■□□□ 1.72
TRAPPC4-203ENST00000447216 BCANQ96GW7 911 aa25.79■■□□□ 1.72
TRAPPC4-203ENST00000447216 SETBP1Q9Y6X0 1596 aa25.78■■□□□ 1.72
TRAPPC4-203ENST00000447216 NPHP4O75161 1426 aaPredicted RBP25.78■■□□□ 1.72
TRAPPC4-203ENST00000447216 TRPM1Q7Z4N2 1603 aa25.77■■□□□ 1.72
TRAPPC4-203ENST00000447216 SETD1AO15047 1707 aaKnown RBP25.77■■□□□ 1.72
TRAPPC4-203ENST00000447216 MED14O60244 1454 aa25.76■■□□□ 1.71
TRAPPC4-203ENST00000447216 ALKQ9UM73 1620 aa25.76■■□□□ 1.71
TRAPPC4-203ENST00000447216 KIAA1210Q9ULL0 1709 aa25.75■■□□□ 1.71
TRAPPC4-203ENST00000447216 CFAP70Q5T0N1 1121 aa25.74■■□□□ 1.71
TRAPPC4-203ENST00000447216 LAMC1P11047 1609 aa25.74■■□□□ 1.71
TRAPPC4-203ENST00000447216 ADAMTS13Q76LX8 1427 aa25.73■■□□□ 1.71
TRAPPC4-203ENST00000447216 ZEB1P37275 1124 aaPredicted RBP25.73■■□□□ 1.71
TRAPPC4-203ENST00000447216 SLC26A8Q96RN1 970 aa25.73■■□□□ 1.71
TRAPPC4-203ENST00000447216 C14orf93Q9H972 538 aaKnown RBP25.7■■□□□ 1.7
TRAPPC4-203ENST00000447216 DIP2AQ14689 1571 aa25.69■■□□□ 1.7
TRAPPC4-203ENST00000447216 ASXL1Q8IXJ9 1541 aa25.68■■□□□ 1.7
TRAPPC4-203ENST00000447216 NBPF1Q3BBV0 1214 aa25.68■■□□□ 1.7
TRAPPC4-203ENST00000447216 RALGAPBQ86X10 1494 aa25.67■■□□□ 1.7
TRAPPC4-203ENST00000447216 TMEM132EQ6IEE7 984 aa25.65■■□□□ 1.7
TRAPPC4-203ENST00000447216 METP08581 1390 aa25.65■■□□□ 1.7
TRAPPC4-203ENST00000447216 TBX22Q9Y458 520 aa25.64■■□□□ 1.7
TRAPPC4-203ENST00000447216 ADGRB1O14514 1584 aa25.64■■□□□ 1.69
TRAPPC4-203ENST00000447216 ROCK2O75116 1388 aaKnown RBP25.63■■□□□ 1.69
TRAPPC4-203ENST00000447216 CHD2O14647 1828 aaKnown RBP25.63■■□□□ 1.69
TRAPPC4-203ENST00000447216 PTPRUQ92729 1446 aa25.58■■□□□ 1.69
TRAPPC4-203ENST00000447216 GPRASP1Q5JY77 1395 aa25.57■■□□□ 1.68
TRAPPC4-203ENST00000447216 STK26Q9P289 416 aa25.57■■□□□ 1.68
TRAPPC4-203ENST00000447216 STRCP1A6NGW2 1772 aa25.56■■□□□ 1.68
TRAPPC4-203ENST00000447216 YTHDC2Q9H6S0 1430 aaKnown RBP25.56■■□□□ 1.68
TRAPPC4-203ENST00000447216 CARD11Q9BXL7 1154 aa25.56■■□□□ 1.68
TRAPPC4-203ENST00000447216 DMRT2Q9Y5R5 561 aa25.56■■□□□ 1.68
TRAPPC4-203ENST00000447216 KNDC1Q76NI1 1749 aa25.54■■□□□ 1.68
TRAPPC4-203ENST00000447216 XRN1Q8IZH2 1706 aaKnown RBP25.54■■□□□ 1.68
TRAPPC4-203ENST00000447216 ARHGEF28Q8N1W1 1705 aaKnown RBP25.53■■□□□ 1.68
TRAPPC4-203ENST00000447216 LRPPRCP42704 1394 aaKnown RBP25.53■■□□□ 1.68
TRAPPC4-203ENST00000447216 PIK3R4Q99570 1358 aa25.53■■□□□ 1.68
TRAPPC4-203ENST00000447216 TRAK1Q9UPV9 953 aa25.52■■□□□ 1.68
TRAPPC4-203ENST00000447216 AMOTL2Q9Y2J4 779 aa25.51■■□□□ 1.67
TRAPPC4-203ENST00000447216 NWD1Q149M9 1564 aa25.51■■□□□ 1.67
TRAPPC4-203ENST00000447216 KCNA6P17658 529 aa25.48■■□□□ 1.67
TRAPPC4-203ENST00000447216 CPS1P31327 1500 aa25.47■■□□□ 1.67
TRAPPC4-203ENST00000447216 ABCC11Q96J66 1382 aa25.47■■□□□ 1.67
TRAPPC4-203ENST00000447216 ZNF335Q9H4Z2 1342 aaPredicted RBP25.47■■□□□ 1.67
TRAPPC4-203ENST00000447216 DLC1Q96QB1 1528 aa25.45■■□□□ 1.66
TRAPPC4-203ENST00000447216 TECPR2O15040 1411 aa25.45■■□□□ 1.66
TRAPPC4-203ENST00000447216 USP47Q96K76 1375 aa25.44■■□□□ 1.66
TRAPPC4-203ENST00000447216 ROBO2Q9HCK4 1378 aa25.44■■□□□ 1.66
TRAPPC4-203ENST00000447216 QRICH2Q9H0J4 1663 aa25.42■■□□□ 1.66
TRAPPC4-203ENST00000447216 PLEKHH1Q9ULM0 1364 aa25.42■■□□□ 1.66
TRAPPC4-203ENST00000447216 PTCH1Q13635 1447 aa25.41■■□□□ 1.66
TRAPPC4-203ENST00000447216 WAPLQ7Z5K2 1190 aa25.41■■□□□ 1.66
TRAPPC4-203ENST00000447216 SAFB2Q14151 953 aaKnown RBP eCLIP25.4■■□□□ 1.66
TRAPPC4-203ENST00000447216 PRAM1Q96QH2 718 aa25.4■■□□□ 1.66
TRAPPC4-203ENST00000447216 NKTRP30414 1462 aaKnown RBP25.4■■□□□ 1.66
TRAPPC4-203ENST00000447216 HSPA5P11021 654 aaKnown RBP25.39■■□□□ 1.66
TRAPPC4-203ENST00000447216 XIRP1Q702N8 1843 aaKnown RBP25.39■■□□□ 1.65
TRAPPC4-203ENST00000447216 EIF4G2P78344 907 aaKnown RBP eCLIP25.38■■□□□ 1.65
TRAPPC4-203ENST00000447216 RBM33Q96EV2 1170 aaKnown RBP25.38■■□□□ 1.65
TRAPPC4-203ENST00000447216 HIRIP3Q9BW71 556 aaPredicted RBP25.38■■□□□ 1.65
TRAPPC4-203ENST00000447216 POGKQ9P215 609 aa25.38■■□□□ 1.65
TRAPPC4-203ENST00000447216 EIF3AQ14152 1382 aaKnown RBP25.38■■□□□ 1.65
TRAPPC4-203ENST00000447216 FAM135BQ49AJ0 1406 aa25.37■■□□□ 1.65
TRAPPC4-203ENST00000447216 PROSER2Q86WR7 435 aaPredicted RBP25.37■■□□□ 1.65
TRAPPC4-203ENST00000447216 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.37■■□□□ 1.65
TRAPPC4-203ENST00000447216 CENPJQ9HC77 1338 aaPredicted RBP25.37■■□□□ 1.65
TRAPPC4-203ENST00000447216 ST20-MTHFSA0A0A6YYL1 179 aa25.36■■□□□ 1.65
TRAPPC4-203ENST00000447216 SIRT1Q96EB6 747 aa25.35■■□□□ 1.65
TRAPPC4-203ENST00000447216 LTBP4Q8N2S1 1624 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms