RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 PLEKHG1Q9ULL1 1385 aa24.16■■□□□ 1.46
SPTLC1P1-201ENST00000447199 KCNA6P17658 529 aa24.15■■□□□ 1.46
SPTLC1P1-201ENST00000447199 NAIPQ13075 1403 aa24.14■■□□□ 1.45
SPTLC1P1-201ENST00000447199 MYO5BQ9ULV0 1848 aa24.14■■□□□ 1.45
SPTLC1P1-201ENST00000447199 XIRP1Q702N8 1843 aaKnown RBP24.13■■□□□ 1.45
SPTLC1P1-201ENST00000447199 NWD1Q149M9 1564 aa24.12■■□□□ 1.45
SPTLC1P1-201ENST00000447199 ILDR2Q71H61 639 aa24.11■■□□□ 1.45
SPTLC1P1-201ENST00000447199 TMEM94Q12767 1356 aa24.1■■□□□ 1.45
SPTLC1P1-201ENST00000447199 HDGFP51858 240 aaKnown RBP24.09■■□□□ 1.45
SPTLC1P1-201ENST00000447199 NKTRP30414 1462 aaKnown RBP24.08■■□□□ 1.45
SPTLC1P1-201ENST00000447199 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.08■■□□□ 1.45
SPTLC1P1-201ENST00000447199 CHGAP10645 457 aaKnown RBP24.07■■□□□ 1.44
SPTLC1P1-201ENST00000447199 PPP1R15AO75807 674 aaPredicted RBP24.06■■□□□ 1.44
SPTLC1P1-201ENST00000447199 HFM1A2PYH4 1435 aa24.05■■□□□ 1.44
SPTLC1P1-201ENST00000447199 ADAMTS13Q76LX8 1427 aa24.05■■□□□ 1.44
SPTLC1P1-201ENST00000447199 BCANQ96GW7 911 aa24.04■■□□□ 1.44
SPTLC1P1-201ENST00000447199 TBX22Q9Y458 520 aa24.04■■□□□ 1.44
SPTLC1P1-201ENST00000447199 PROSER2Q86WR7 435 aaPredicted RBP24.03■■□□□ 1.44
SPTLC1P1-201ENST00000447199 SENP3Q9H4L4 574 aaPredicted RBP24.03■■□□□ 1.44
SPTLC1P1-201ENST00000447199 SPHKAPQ2M3C7 1700 aa24.03■■□□□ 1.44
SPTLC1P1-201ENST00000447199 NUTM2DQ5VT03 806 aaPredicted RBP24.01■■□□□ 1.43
SPTLC1P1-201ENST00000447199 RBM33Q96EV2 1170 aaKnown RBP24.01■■□□□ 1.43
SPTLC1P1-201ENST00000447199 CHD2O14647 1828 aaKnown RBP24■■□□□ 1.43
SPTLC1P1-201ENST00000447199 FAM135BQ49AJ0 1406 aa24■■□□□ 1.43
SPTLC1P1-201ENST00000447199 DIP2AQ14689 1571 aa23.99■■□□□ 1.43
SPTLC1P1-201ENST00000447199 TRPM2O94759 1503 aa23.98■■□□□ 1.43
SPTLC1P1-201ENST00000447199 MED1Q15648 1581 aaPredicted RBP23.98■■□□□ 1.43
SPTLC1P1-201ENST00000447199 PIK3R4Q99570 1358 aa23.97■■□□□ 1.43
SPTLC1P1-201ENST00000447199 CLTCL1P53675 1640 aa23.95■■□□□ 1.43
SPTLC1P1-201ENST00000447199 NCOA3Q9Y6Q9 1424 aa23.93■■□□□ 1.42
SPTLC1P1-201ENST00000447199 MSH6P52701 1360 aa23.92■■□□□ 1.42
SPTLC1P1-201ENST00000447199 SETBP1Q9Y6X0 1596 aa23.92■■□□□ 1.42
SPTLC1P1-201ENST00000447199 PTPRUQ92729 1446 aa23.92■■□□□ 1.42
SPTLC1P1-201ENST00000447199 NRXN3Q9Y4C0 1643 aa23.92■■□□□ 1.42
SPTLC1P1-201ENST00000447199 SOCS7O14512 581 aa23.9■■□□□ 1.42
SPTLC1P1-201ENST00000447199 TRIM52Q96A61 297 aa23.89■■□□□ 1.41
SPTLC1P1-201ENST00000447199 NEXMIFQ5QGS0 1516 aa23.89■■□□□ 1.41
SPTLC1P1-201ENST00000447199 ZNF326Q5BKZ1 582 aaKnown RBP23.88■■□□□ 1.41
SPTLC1P1-201ENST00000447199 ROBO1Q9Y6N7 1651 aa23.88■■□□□ 1.41
SPTLC1P1-201ENST00000447199 SLC4A1APQ9BWU0 796 aaKnown RBP23.87■■□□□ 1.41
SPTLC1P1-201ENST00000447199 SLAIN2Q9P270 581 aa23.86■■□□□ 1.41
SPTLC1P1-201ENST00000447199 AMOTL2Q9Y2J4 779 aa23.86■■□□□ 1.41
SPTLC1P1-201ENST00000447199 METP08581 1390 aa23.83■■□□□ 1.41
SPTLC1P1-201ENST00000447199 XRN1Q8IZH2 1706 aaKnown RBP23.83■■□□□ 1.41
SPTLC1P1-201ENST00000447199 C19orf44Q9H6X5 657 aa23.81■■□□□ 1.4
SPTLC1P1-201ENST00000447199 KIF1BO60333 1816 aa23.8■■□□□ 1.4
SPTLC1P1-201ENST00000447199 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.79■■□□□ 1.4
SPTLC1P1-201ENST00000447199 C14orf37Q86TY3 774 aa23.77■■□□□ 1.4
SPTLC1P1-201ENST00000447199 CADPS2Q86UW7 1296 aa23.77■■□□□ 1.4
SPTLC1P1-201ENST00000447199 FOXD1Q16676 465 aa23.76■■□□□ 1.39
SPTLC1P1-201ENST00000447199 RPGRIP1LQ68CZ1 1315 aa23.76■■□□□ 1.39
SPTLC1P1-201ENST00000447199 DCCP43146 1447 aa23.75■■□□□ 1.39
SPTLC1P1-201ENST00000447199 VGFO15240 615 aaPredicted RBP23.74■■□□□ 1.39
SPTLC1P1-201ENST00000447199 PHF23Q9BUL5 403 aaPredicted RBP23.74■■□□□ 1.39
SPTLC1P1-201ENST00000447199 ATF3P18847 181 aa23.73■■□□□ 1.39
SPTLC1P1-201ENST00000447199 MPHOSPH9Q99550 1183 aa23.73■■□□□ 1.39
SPTLC1P1-201ENST00000447199 SETD1AO15047 1707 aaKnown RBP23.71■■□□□ 1.39
SPTLC1P1-201ENST00000447199 RGS17Q9UGC6 210 aaPredicted RBP23.71■■□□□ 1.39
SPTLC1P1-201ENST00000447199 PHLPP1O60346 1717 aa23.7■■□□□ 1.39
SPTLC1P1-201ENST00000447199 COL16A1Q07092 1604 aaPredicted RBP23.7■■□□□ 1.39
SPTLC1P1-201ENST00000447199 SPATA31E1Q6ZUB1 1445 aa23.69■■□□□ 1.38
SPTLC1P1-201ENST00000447199 AHDC1Q5TGY3 1603 aaPredicted RBP23.69■■□□□ 1.38
SPTLC1P1-201ENST00000447199 CCDC144AA2RUR9 1427 aa23.68■■□□□ 1.38
SPTLC1P1-201ENST00000447199 PRAG1Q86YV5 1406 aa23.68■■□□□ 1.38
SPTLC1P1-201ENST00000447199 SETD5Q9C0A6 1442 aa23.68■■□□□ 1.38
SPTLC1P1-201ENST00000447199 PPLO60437 1756 aa23.68■■□□□ 1.38
SPTLC1P1-201ENST00000447199 PTCH1Q13635 1447 aa23.67■■□□□ 1.38
SPTLC1P1-201ENST00000447199 ADGRL3Q9HAR2 1447 aa23.67■■□□□ 1.38
SPTLC1P1-201ENST00000447199 JCADQ9P266 1359 aa23.67■■□□□ 1.38
SPTLC1P1-201ENST00000447199 BRINP3Q76B58 766 aa23.67■■□□□ 1.38
SPTLC1P1-201ENST00000447199 MST1RQ04912 1400 aa23.67■■□□□ 1.38
SPTLC1P1-201ENST00000447199 ACIN1Q9UKV3 1341 aaKnown RBP23.65■■□□□ 1.38
SPTLC1P1-201ENST00000447199 ROBO2Q9HCK4 1378 aa23.65■■□□□ 1.38
SPTLC1P1-201ENST00000447199 NALCNQ8IZF0 1738 aa23.62■■□□□ 1.37
SPTLC1P1-201ENST00000447199 ADGRF5Q8IZF2 1346 aa23.61■■□□□ 1.37
SPTLC1P1-201ENST00000447199 ASXL1Q8IXJ9 1541 aa23.61■■□□□ 1.37
SPTLC1P1-201ENST00000447199 RAB3GAP2Q9H2M9 1393 aa23.6■■□□□ 1.37
SPTLC1P1-201ENST00000447199 RGL3Q3MIN7 710 aa23.59■■□□□ 1.37
SPTLC1P1-201ENST00000447199 ANKRD30BQ9BXX2 1392 aa23.59■■□□□ 1.37
SPTLC1P1-201ENST00000447199 IFT172Q9UG01 1749 aa23.57■■□□□ 1.36
SPTLC1P1-201ENST00000447199 SPATA31A6Q5VVP1 1343 aa23.56■■□□□ 1.36
SPTLC1P1-201ENST00000447199 LRP6O75581 1613 aa23.55■■□□□ 1.36
SPTLC1P1-201ENST00000447199 POTEAQ6S8J7 498 aa23.55■■□□□ 1.36
SPTLC1P1-201ENST00000447199 PIK3C2GO75747 1445 aa23.55■■□□□ 1.36
SPTLC1P1-201ENST00000447199 NHSL1Q5SYE7 1610 aa23.55■■□□□ 1.36
SPTLC1P1-201ENST00000447199 SHPRHQ149N8 1683 aa23.54■■□□□ 1.36
SPTLC1P1-201ENST00000447199 C1orf167Q5SNV9 1468 aa23.54■■□□□ 1.36
SPTLC1P1-201ENST00000447199 TECPR2O15040 1411 aa23.52■■□□□ 1.36
SPTLC1P1-201ENST00000447199 LRPPRCP42704 1394 aaKnown RBP23.5■■□□□ 1.35
SPTLC1P1-201ENST00000447199 NRXN1Q9ULB1 1477 aa23.49■■□□□ 1.35
SPTLC1P1-201ENST00000447199 DDX17Q92841 729 aaKnown RBP23.48■■□□□ 1.35
SPTLC1P1-201ENST00000447199 ABCC11Q96J66 1382 aa23.48■■□□□ 1.35
SPTLC1P1-201ENST00000447199 LAMC1P11047 1609 aa23.48■■□□□ 1.35
SPTLC1P1-201ENST00000447199 MYOM2P54296 1465 aa23.46■■□□□ 1.35
SPTLC1P1-201ENST00000447199 CDC42BPGQ6DT37 1551 aa23.45■■□□□ 1.34
SPTLC1P1-201ENST00000447199 HRCP23327 699 aa23.45■■□□□ 1.34
SPTLC1P1-201ENST00000447199 TMEM132EQ6IEE7 984 aa23.45■■□□□ 1.34
SPTLC1P1-201ENST00000447199 LRRC59Q96AG4 307 aaKnown RBP23.45■■□□□ 1.34
SPTLC1P1-201ENST00000447199 ORAI2Q96SN7 254 aa23.45■■□□□ 1.34
SPTLC1P1-201ENST00000447199 C14orf93Q9H972 538 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms