RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 WASHC2AQ641Q2 1341 aa8.72□□□□□ -1.01
CDK12-202ENST00000447079 NEXNQ0ZGT2 675 aa8.72□□□□□ -1.01
CDK12-202ENST00000447079 PBRM1Q86U86 1689 aa8.72□□□□□ -1.01
CDK12-202ENST00000447079 TPM4P67936 248 aa8.72□□□□□ -1.01
CDK12-202ENST00000447079 PSME1Q06323 249 aa8.72□□□□□ -1.01
CDK12-202ENST00000447079 KIAA2012Q0VF49 1180 aa8.72□□□□□ -1.01
CDK12-202ENST00000447079 SMG6Q86US8 1419 aaKnown RBP8.72□□□□□ -1.01
CDK12-202ENST00000447079 GRIN2AQ12879 1464 aa8.72□□□□□ -1.01
CDK12-202ENST00000447079 GOLGA6L3A6NEY3 463 aa8.72□□□□□ -1.01
CDK12-202ENST00000447079 CHMP3Q9Y3E7 222 aa8.72□□□□□ -1.01
CDK12-202ENST00000447079 TEFQ10587 303 aa8.71□□□□□ -1.01
CDK12-202ENST00000447079 WWC1Q8IX03 1113 aa8.71□□□□□ -1.01
CDK12-202ENST00000447079 SENP3-EIF4A1A0A087X0R7 540 aa8.71□□□□□ -1.01
CDK12-202ENST00000447079 FAM135AQ9P2D6 1515 aa8.71□□□□□ -1.01
CDK12-202ENST00000447079 ST18O60284 1047 aa8.71□□□□□ -1.01
CDK12-202ENST00000447079 PHF14O94880 888 aa8.71□□□□□ -1.01
CDK12-202ENST00000447079 RAPGEF6Q8TEU7 1601 aa8.71□□□□□ -1.01
CDK12-202ENST00000447079 DIAPH1O60610 1272 aaKnown RBP8.71□□□□□ -1.02
CDK12-202ENST00000447079 TTC5Q8N0Z6 440 aa8.71□□□□□ -1.02
CDK12-202ENST00000447079 PRKRIP1Q9H875 184 aaPredicted RBP8.71□□□□□ -1.02
CDK12-202ENST00000447079 DDX58O95786 925 aaKnown RBP8.71□□□□□ -1.02
CDK12-202ENST00000447079 PLCB2Q00722 1185 aa8.71□□□□□ -1.02
CDK12-202ENST00000447079 TRIM6-TRIM34B2RNG4 842 aa8.71□□□□□ -1.02
CDK12-202ENST00000447079 ATF3P18847 181 aa8.71□□□□□ -1.02
CDK12-202ENST00000447079 ZKSCAN2Q63HK3 967 aa8.71□□□□□ -1.02
CDK12-202ENST00000447079 NUTM2DQ5VT03 806 aaPredicted RBP8.7□□□□□ -1.02
CDK12-202ENST00000447079 FANCIQ9NVI1 1328 aa8.7□□□□□ -1.02
CDK12-202ENST00000447079 G3V3G9 751 aa8.7□□□□□ -1.02
CDK12-202ENST00000447079 DCAF8Q5TAQ9 597 aa8.7□□□□□ -1.02
CDK12-202ENST00000447079 BRD4O60885 1362 aaPredicted RBP8.7□□□□□ -1.02
CDK12-202ENST00000447079 KIF16BQ96L93 1317 aa8.7□□□□□ -1.02
CDK12-202ENST00000447079 SLC52A1Q9NWF4 448 aa8.7□□□□□ -1.02
CDK12-202ENST00000447079 CCDC7Q96M83 1385 aa8.7□□□□□ -1.02
CDK12-202ENST00000447079 RPGRIP1LQ68CZ1 1315 aa8.7□□□□□ -1.02
CDK12-202ENST00000447079 ZNF330Q9Y3S2 320 aaPredicted RBP8.7□□□□□ -1.02
CDK12-202ENST00000447079 MINK1Q8N4C8 1332 aaPredicted RBP8.7□□□□□ -1.02
CDK12-202ENST00000447079 WDR97A6NE52 1622 aa8.7□□□□□ -1.02
CDK12-202ENST00000447079 RUNDC1Q96C34 613 aa8.69□□□□□ -1.02
CDK12-202ENST00000447079 CCDC146Q8IYE0 955 aa8.69□□□□□ -1.02
CDK12-202ENST00000447079 DDX19BQ9UMR2 479 aa8.69□□□□□ -1.02
CDK12-202ENST00000447079 GPRASP1Q5JY77 1395 aa8.69□□□□□ -1.02
CDK12-202ENST00000447079 CAMSAP2Q08AD1 1489 aa8.69□□□□□ -1.02
CDK12-202ENST00000447079 ANO8Q9HCE9 1232 aaPredicted RBP8.69□□□□□ -1.02
CDK12-202ENST00000447079 CFAP43Q8NDM7 1665 aa8.69□□□□□ -1.02
CDK12-202ENST00000447079 SLC4A10Q6U841 1118 aa8.69□□□□□ -1.02
CDK12-202ENST00000447079 ANKRD30BQ9BXX2 1392 aa8.68□□□□□ -1.02
CDK12-202ENST00000447079 GTF2E1P29083 439 aaPredicted RBP8.68□□□□□ -1.02
CDK12-202ENST00000447079 KAT6BQ8WYB5 2073 aa8.68□□□□□ -1.02
CDK12-202ENST00000447079 API5Q9BZZ5 524 aaKnown RBP8.68□□□□□ -1.02
CDK12-202ENST00000447079 ISY1Q9ULR0 285 aaKnown RBP8.68□□□□□ -1.02
CDK12-202ENST00000447079 HMGB2P26583 209 aaKnown RBP8.67□□□□□ -1.02
CDK12-202ENST00000447079 RUFY2Q8WXA3 655 aa8.67□□□□□ -1.02
CDK12-202ENST00000447079 HSP90B1P14625 803 aaKnown RBP8.67□□□□□ -1.02
CDK12-202ENST00000447079 DRC7Q8IY82 874 aa8.67□□□□□ -1.02
CDK12-202ENST00000447079 LTV1Q96GA3 475 aaPredicted RBP8.67□□□□□ -1.02
CDK12-202ENST00000447079 APBB1O00213 710 aa8.67□□□□□ -1.02
CDK12-202ENST00000447079 GNAI1P63096 354 aa8.67□□□□□ -1.02
CDK12-202ENST00000447079 ATP6V1DQ9Y5K8 247 aa8.67□□□□□ -1.02
CDK12-202ENST00000447079 GSE1Q14687 1217 aa8.67□□□□□ -1.02
CDK12-202ENST00000447079 AMOTL1Q8IY63 956 aa8.67□□□□□ -1.02
CDK12-202ENST00000447079 THEMISQ8N1K5 641 aaPredicted RBP8.66□□□□□ -1.02
CDK12-202ENST00000447079 CDK13Q14004 1512 aaKnown RBP8.66□□□□□ -1.02
CDK12-202ENST00000447079 HSP90AB4PQ58FF6 505 aa8.65□□□□□ -1.02
CDK12-202ENST00000447079 AEBP2Q6ZN18 517 aaPredicted RBP8.65□□□□□ -1.02
CDK12-202ENST00000447079 ZNF644Q9H582 1327 aaPredicted RBP8.65□□□□□ -1.02
CDK12-202ENST00000447079 RRP1P56182 461 aaKnown RBP8.65□□□□□ -1.02
CDK12-202ENST00000447079 REC8O95072 547 aa8.65□□□□□ -1.02
CDK12-202ENST00000447079 NOL10Q9BSC4 688 aaKnown RBP8.65□□□□□ -1.02
CDK12-202ENST00000447079 NINLQ9Y2I6 1382 aa8.65□□□□□ -1.03
CDK12-202ENST00000447079 PRKCSHP14314 528 aaPredicted RBP8.65□□□□□ -1.03
CDK12-202ENST00000447079 C9orf78Q9NZ63 289 aaPredicted RBP8.65□□□□□ -1.03
CDK12-202ENST00000447079 PKNOX2Q96KN3 472 aa8.64□□□□□ -1.03
CDK12-202ENST00000447079 FRAT2O75474 233 aaPredicted RBP8.64□□□□□ -1.03
CDK12-202ENST00000447079 TPRNQ4KMQ1 711 aa8.64□□□□□ -1.03
CDK12-202ENST00000447079 DDX11L8A8MPP1 907 aa8.64□□□□□ -1.03
CDK12-202ENST00000447079 ZNF692Q9BU19 519 aaPredicted RBP8.64□□□□□ -1.03
CDK12-202ENST00000447079 RAPGEF4Q8WZA2 1011 aa8.63□□□□□ -1.03
CDK12-202ENST00000447079 ARID3AQ99856 593 aa8.63□□□□□ -1.03
CDK12-202ENST00000447079 EIF2AK4Q9P2K8 1649 aaKnown RBP8.63□□□□□ -1.03
CDK12-202ENST00000447079 URB2Q14146 1524 aaKnown RBP8.63□□□□□ -1.03
CDK12-202ENST00000447079 NUTM2FA1L443 756 aa8.63□□□□□ -1.03
CDK12-202ENST00000447079 ERBINQ96RT1 1412 aa8.63□□□□□ -1.03
CDK12-202ENST00000447079 RIPK4P57078 832 aa8.63□□□□□ -1.03
CDK12-202ENST00000447079 MEX3CQ5U5Q3 659 aaKnown RBP8.63□□□□□ -1.03
CDK12-202ENST00000447079 ARHGEF11O15085 1522 aa8.63□□□□□ -1.03
CDK12-202ENST00000447079 KIF7Q2M1P5 1343 aa8.63□□□□□ -1.03
CDK12-202ENST00000447079 MFAP1P55081 439 aaKnown RBP8.63□□□□□ -1.03
CDK12-202ENST00000447079 GZF1Q9H116 711 aaPredicted RBP8.63□□□□□ -1.03
CDK12-202ENST00000447079 TULP1O00294 542 aaPredicted RBP8.63□□□□□ -1.03
CDK12-202ENST00000447079 FAM161AQ3B820 660 aa8.63□□□□□ -1.03
CDK12-202ENST00000447079 ATAD2Q6PL18 1390 aa8.62□□□□□ -1.03
CDK12-202ENST00000447079 GAS2L2Q8NHY3 880 aa8.62□□□□□ -1.03
CDK12-202ENST00000447079 TAOK2Q9UL54 1235 aa8.62□□□□□ -1.03
CDK12-202ENST00000447079 ADGRL1O94910 1474 aa8.62□□□□□ -1.03
CDK12-202ENST00000447079 CPLX2Q6PUV4 134 aaKnown RBP8.62□□□□□ -1.03
CDK12-202ENST00000447079 RNF20Q5VTR2 975 aa8.61□□□□□ -1.03
CDK12-202ENST00000447079 CT47B1P0C2W7 299 aaPredicted RBP8.61□□□□□ -1.03
CDK12-202ENST00000447079 DIAPH3Q9NSV4 1193 aa8.61□□□□□ -1.03
CDK12-202ENST00000447079 ADGBQ8N7X0 1667 aa8.61□□□□□ -1.03
CDK12-202ENST00000447079 DZIP1LQ8IYY4 767 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms