RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 IGF1RP08069 1367 aa10.84□□□□□ -0.67
MCF2L2-203ENST00000447025 SMARCA2P51531 1590 aa10.83□□□□□ -0.68
MCF2L2-203ENST00000447025 DYNC1I1O14576 645 aa10.83□□□□□ -0.68
MCF2L2-203ENST00000447025 CAPN2P17655 700 aa10.83□□□□□ -0.68
MCF2L2-203ENST00000447025 KIF16BQ96L93 1317 aa10.83□□□□□ -0.68
MCF2L2-203ENST00000447025 OFD1O75665 1012 aa10.83□□□□□ -0.68
MCF2L2-203ENST00000447025 EEA1Q15075 1411 aa10.83□□□□□ -0.68
MCF2L2-203ENST00000447025 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.82□□□□□ -0.68
MCF2L2-203ENST00000447025 RIMBP3CA6NJZ7 1639 aa10.81□□□□□ -0.68
MCF2L2-203ENST00000447025 RIMBP3BA6NNM3 1639 aa10.81□□□□□ -0.68
MCF2L2-203ENST00000447025 RIMBP3Q9UFD9 1639 aa10.81□□□□□ -0.68
MCF2L2-203ENST00000447025 SCP2P22307 547 aa10.81□□□□□ -0.68
MCF2L2-203ENST00000447025 MLECQ14165 292 aa10.81□□□□□ -0.68
MCF2L2-203ENST00000447025 NME8Q8N427 588 aa10.81□□□□□ -0.68
MCF2L2-203ENST00000447025 MSL3Q8N5Y2 521 aaKnown RBP10.81□□□□□ -0.68
MCF2L2-203ENST00000447025 CALR3Q96L12 384 aaKnown RBP10.81□□□□□ -0.68
MCF2L2-203ENST00000447025 KCNH8Q96L42 1107 aa10.81□□□□□ -0.68
MCF2L2-203ENST00000447025 IPO8O15397 1037 aaKnown RBP10.8□□□□□ -0.68
MCF2L2-203ENST00000447025 BRD1O95696 1058 aa10.8□□□□□ -0.68
MCF2L2-203ENST00000447025 FAM210AQ96ND0 272 aa10.8□□□□□ -0.68
MCF2L2-203ENST00000447025 DONSONQ9NYP3 566 aa10.8□□□□□ -0.68
MCF2L2-203ENST00000447025 CCDC66A2RUB6 948 aa10.8□□□□□ -0.68
MCF2L2-203ENST00000447025 KIF1CO43896 1103 aaKnown RBP10.8□□□□□ -0.68
MCF2L2-203ENST00000447025 ZNF853P0CG23 659 aa10.8□□□□□ -0.68
MCF2L2-203ENST00000447025 DDX46Q7L014 1031 aaKnown RBP10.8□□□□□ -0.68
MCF2L2-203ENST00000447025 PDS5BQ9NTI5 1447 aa10.79□□□□□ -0.68
MCF2L2-203ENST00000447025 CFAP65Q6ZU64 1925 aaKnown RBP10.79□□□□□ -0.68
MCF2L2-203ENST00000447025 ZC3H12AQ5D1E8 599 aaKnown RBP10.79□□□□□ -0.68
MCF2L2-203ENST00000447025 TIGD1Q96MW7 591 aa10.79□□□□□ -0.68
MCF2L2-203ENST00000447025 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.79□□□□□ -0.68
MCF2L2-203ENST00000447025 CT47B1P0C2W7 299 aaPredicted RBP10.79□□□□□ -0.68
MCF2L2-203ENST00000447025 FOXD4L1Q9NU39 408 aa10.79□□□□□ -0.68
MCF2L2-203ENST00000447025 FEZ2Q9UHY8 353 aaPredicted RBP10.79□□□□□ -0.68
MCF2L2-203ENST00000447025 NUB1Q9Y5A7 615 aa10.79□□□□□ -0.68
MCF2L2-203ENST00000447025 GOLGA6CA6NDK9 693 aa10.78□□□□□ -0.68
MCF2L2-203ENST00000447025 GOLGA6BA6NDN3 693 aa10.78□□□□□ -0.68
MCF2L2-203ENST00000447025 GOLGA6DP0CG33 693 aa10.78□□□□□ -0.68
MCF2L2-203ENST00000447025 XRCC6P12956 609 aaKnown RBP eCLIP10.78□□□□□ -0.68
MCF2L2-203ENST00000447025 GOLGA6AQ9NYA3 693 aa10.78□□□□□ -0.68
MCF2L2-203ENST00000447025 CCDC125Q86Z20 511 aa10.77□□□□□ -0.68
MCF2L2-203ENST00000447025 NBPF3Q9H094 633 aa10.77□□□□□ -0.68
MCF2L2-203ENST00000447025 KIF3AQ9Y496 699 aa10.77□□□□□ -0.68
MCF2L2-203ENST00000447025 PAIP2Q9BPZ3 127 aaKnown RBP10.77□□□□□ -0.69
MCF2L2-203ENST00000447025 ERBB4Q15303 1308 aa10.77□□□□□ -0.69
MCF2L2-203ENST00000447025 ZBED9Q6R2W3 1325 aa10.77□□□□□ -0.69
MCF2L2-203ENST00000447025 MPHOSPH10O00566 681 aaKnown RBP10.76□□□□□ -0.69
MCF2L2-203ENST00000447025 CTR9Q6PD62 1173 aa10.76□□□□□ -0.69
MCF2L2-203ENST00000447025 FSD2A1L4K1 749 aa10.75□□□□□ -0.69
MCF2L2-203ENST00000447025 COQ9O75208 318 aa10.75□□□□□ -0.69
MCF2L2-203ENST00000447025 MFAP1P55081 439 aaKnown RBP10.75□□□□□ -0.69
MCF2L2-203ENST00000447025 WDR62O43379 1518 aa10.75□□□□□ -0.69
MCF2L2-203ENST00000447025 GTF2A1P52655 376 aaPredicted RBP10.75□□□□□ -0.69
MCF2L2-203ENST00000447025 BRMS1Q9HCU9 246 aa10.75□□□□□ -0.69
MCF2L2-203ENST00000447025 KLHL33A6NCF5 533 aa10.74□□□□□ -0.69
MCF2L2-203ENST00000447025 CALRP27797 417 aaKnown RBP10.74□□□□□ -0.69
MCF2L2-203ENST00000447025 SSFA2P28290 1259 aa10.74□□□□□ -0.69
MCF2L2-203ENST00000447025 TDO2P48775 406 aa10.74□□□□□ -0.69
MCF2L2-203ENST00000447025 UVSSAQ2YD98 709 aa10.74□□□□□ -0.69
MCF2L2-203ENST00000447025 C1QTNF12Q5T7M4 302 aa10.74□□□□□ -0.69
MCF2L2-203ENST00000447025 B4GALNT3Q6L9W6 998 aa10.74□□□□□ -0.69
MCF2L2-203ENST00000447025 DHX16O60231 1041 aaKnown RBP10.74□□□□□ -0.69
MCF2L2-203ENST00000447025 FRAT2O75474 233 aaPredicted RBP10.74□□□□□ -0.69
MCF2L2-203ENST00000447025 MNS1Q8NEH6 495 aa10.73□□□□□ -0.69
MCF2L2-203ENST00000447025 CCDC189A1A4V9 331 aa10.73□□□□□ -0.69
MCF2L2-203ENST00000447025 MTA3Q9BTC8 594 aa10.73□□□□□ -0.69
MCF2L2-203ENST00000447025 CCER2I3L3R5 266 aa10.72□□□□□ -0.69
MCF2L2-203ENST00000447025 ILDR1Q86SU0 546 aaPredicted RBP10.72□□□□□ -0.69
MCF2L2-203ENST00000447025 CCDC97Q96F63 343 aaPredicted RBP10.72□□□□□ -0.69
MCF2L2-203ENST00000447025 MED4Q9NPJ6 270 aa10.72□□□□□ -0.69
MCF2L2-203ENST00000447025 RPS6KL1Q9Y6S9 549 aa10.72□□□□□ -0.69
MCF2L2-203ENST00000447025 ZRSR2Q15696 482 aaKnown RBP10.72□□□□□ -0.69
MCF2L2-203ENST00000447025 SMC3Q9UQE7 1217 aa10.72□□□□□ -0.69
MCF2L2-203ENST00000447025 MRC2Q9UBG0 1479 aa10.71□□□□□ -0.69
MCF2L2-203ENST00000447025 PPP1R12AO14974 1030 aaPredicted RBP10.71□□□□□ -0.69
MCF2L2-203ENST00000447025 NOP2P46087 812 aaKnown RBP10.71□□□□□ -0.69
MCF2L2-203ENST00000447025 UQCRHLA0A096LP55 91 aa10.7□□□□□ -0.7
MCF2L2-203ENST00000447025 KIF3CO14782 793 aa10.7□□□□□ -0.7
MCF2L2-203ENST00000447025 UQCRHP07919 91 aa10.7□□□□□ -0.7
MCF2L2-203ENST00000447025 NOL8Q76FK4 1167 aaKnown RBP10.7□□□□□ -0.7
MCF2L2-203ENST00000447025 ZNF771Q7L3S4 317 aaPredicted RBP10.7□□□□□ -0.7
MCF2L2-203ENST00000447025 ATL2Q8NHH9 583 aa10.7□□□□□ -0.7
MCF2L2-203ENST00000447025 ANAPC4Q9UJX5 808 aa10.7□□□□□ -0.7
MCF2L2-203ENST00000447025 CTAGE5O15320 804 aa10.7□□□□□ -0.7
MCF2L2-203ENST00000447025 ANP32CO43423 234 aa10.7□□□□□ -0.7
MCF2L2-203ENST00000447025 CALCOCO1Q9P1Z2 691 aa10.7□□□□□ -0.7
MCF2L2-203ENST00000447025 ARHGEF11O15085 1522 aa10.7□□□□□ -0.7
MCF2L2-203ENST00000447025 NESP48681 1621 aa10.69□□□□□ -0.7
MCF2L2-203ENST00000447025 CBX1P83916 185 aa10.69□□□□□ -0.7
MCF2L2-203ENST00000447025 APBB1IPQ7Z5R6 666 aaPredicted RBP10.69□□□□□ -0.7
MCF2L2-203ENST00000447025 POGKQ9P215 609 aa10.69□□□□□ -0.7
MCF2L2-203ENST00000447025 PKD2Q13563 968 aa10.69□□□□□ -0.7
MCF2L2-203ENST00000447025 PROCA1Q8NCQ7 364 aaPredicted RBP10.69□□□□□ -0.7
MCF2L2-203ENST00000447025 PIK3R5Q8WYR1 880 aa10.69□□□□□ -0.7
MCF2L2-203ENST00000447025 KDM4CQ9H3R0 1056 aa10.69□□□□□ -0.7
MCF2L2-203ENST00000447025 MYH16Q9H6N6 1097 aa10.69□□□□□ -0.7
MCF2L2-203ENST00000447025 GUCY2CP25092 1073 aa10.68□□□□□ -0.7
MCF2L2-203ENST00000447025 TNNT3P45378 269 aaPredicted RBP10.68□□□□□ -0.7
MCF2L2-203ENST00000447025 CSPP1Q1MSJ5 1256 aa10.68□□□□□ -0.7
MCF2L2-203ENST00000447025 C11orf91Q3C1V1 193 aa10.68□□□□□ -0.7
MCF2L2-203ENST00000447025 SWT1Q5T5J6 900 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms