RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 ZFYVE9O95405 1425 aa32.35■■■□□ 2.77
APOE-204ENST00000446996 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.35■■■□□ 2.77
APOE-204ENST00000446996 RIMS2Q9UQ26 1411 aa32.34■■■□□ 2.77
APOE-204ENST00000446996 ANKRD30BQ9BXX2 1392 aa32.32■■■□□ 2.76
APOE-204ENST00000446996 IQGAP1P46940 1657 aa32.31■■■□□ 2.76
APOE-204ENST00000446996 FBXO41Q8TF61 875 aa32.3■■■□□ 2.76
APOE-204ENST00000446996 RPGRIP1LQ68CZ1 1315 aa32.26■■■□□ 2.76
APOE-204ENST00000446996 ZNF326Q5BKZ1 582 aaKnown RBP32.25■■■□□ 2.75
APOE-204ENST00000446996 PLEKHG1Q9ULL1 1385 aa32.23■■■□□ 2.75
APOE-204ENST00000446996 SPATA31E1Q6ZUB1 1445 aa32.22■■■□□ 2.75
APOE-204ENST00000446996 PPP1R15AO75807 674 aaPredicted RBP32.21■■■□□ 2.75
APOE-204ENST00000446996 NEXMIFQ5QGS0 1516 aa32.2■■■□□ 2.74
APOE-204ENST00000446996 VGFO15240 615 aaPredicted RBP32.15■■■□□ 2.74
APOE-204ENST00000446996 PPLO60437 1756 aa32.14■■■□□ 2.74
APOE-204ENST00000446996 DHX57Q6P158 1386 aaKnown RBP32.13■■■□□ 2.73
APOE-204ENST00000446996 PCGF6Q9BYE7 350 aa32.13■■■□□ 2.73
APOE-204ENST00000446996 CERKQ8TCT0 537 aa32.12■■■□□ 2.73
APOE-204ENST00000446996 LTBP4Q8N2S1 1624 aa32.11■■■□□ 2.73
APOE-204ENST00000446996 TBX22Q9Y458 520 aa32.11■■■□□ 2.73
APOE-204ENST00000446996 ZNF335Q9H4Z2 1342 aaPredicted RBP32.1■■■□□ 2.73
APOE-204ENST00000446996 NUTM2DQ5VT03 806 aaPredicted RBP32.1■■■□□ 2.73
APOE-204ENST00000446996 RGL3Q3MIN7 710 aa32.09■■■□□ 2.73
APOE-204ENST00000446996 BCANQ96GW7 911 aa32.09■■■□□ 2.73
APOE-204ENST00000446996 DIP2AQ14689 1571 aa32.09■■■□□ 2.73
APOE-204ENST00000446996 SETBP1Q9Y6X0 1596 aa32.08■■■□□ 2.73
APOE-204ENST00000446996 IFT172Q9UG01 1749 aa32.08■■■□□ 2.73
APOE-204ENST00000446996 ADAMTS13Q76LX8 1427 aa32.07■■■□□ 2.72
APOE-204ENST00000446996 SLC26A8Q96RN1 970 aa32.06■■■□□ 2.72
APOE-204ENST00000446996 CPS1P31327 1500 aa32.05■■■□□ 2.72
APOE-204ENST00000446996 STAC3Q96MF2 364 aa32.03■■■□□ 2.72
APOE-204ENST00000446996 PIK3R4Q99570 1358 aa32.03■■■□□ 2.72
APOE-204ENST00000446996 NRXN3Q9Y4C0 1643 aa32.02■■■□□ 2.72
APOE-204ENST00000446996 KCNA6P17658 529 aa32■■■□□ 2.71
APOE-204ENST00000446996 IQSEC2Q5JU85 1478 aa31.99■■■□□ 2.71
APOE-204ENST00000446996 CHD2O14647 1828 aaKnown RBP31.98■■■□□ 2.71
APOE-204ENST00000446996 STRCP1A6NGW2 1772 aa31.97■■■□□ 2.71
APOE-204ENST00000446996 MYOM2P54296 1465 aa31.97■■■□□ 2.71
APOE-204ENST00000446996 NWD1Q149M9 1564 aa31.94■■■□□ 2.7
APOE-204ENST00000446996 ADGRF5Q8IZF2 1346 aa31.94■■■□□ 2.7
APOE-204ENST00000446996 NRXN1Q9ULB1 1477 aa31.92■■■□□ 2.7
APOE-204ENST00000446996 SENP3Q9H4L4 574 aaPredicted RBP31.91■■■□□ 2.7
APOE-204ENST00000446996 ALKQ9UM73 1620 aa31.9■■■□□ 2.7
APOE-204ENST00000446996 PIK3C2GO75747 1445 aa31.9■■■□□ 2.7
APOE-204ENST00000446996 NKTRP30414 1462 aaKnown RBP31.89■■■□□ 2.7
APOE-204ENST00000446996 SETD1AO15047 1707 aaKnown RBP31.89■■■□□ 2.69
APOE-204ENST00000446996 DCAF11Q8TEB1 546 aa31.87■■■□□ 2.69
APOE-204ENST00000446996 LRRC7Q96NW7 1537 aa31.86■■■□□ 2.69
APOE-204ENST00000446996 SIN3AQ96ST3 1273 aa31.86■■■□□ 2.69
APOE-204ENST00000446996 METP08581 1390 aa31.84■■■□□ 2.69
APOE-204ENST00000446996 PTPRUQ92729 1446 aa31.83■■■□□ 2.69
APOE-204ENST00000446996 C14orf93Q9H972 538 aaKnown RBP31.82■■■□□ 2.68
APOE-204ENST00000446996 AMOTL2Q9Y2J4 779 aa31.82■■■□□ 2.68
APOE-204ENST00000446996 CLSPNQ9HAW4 1339 aa31.81■■■□□ 2.68
APOE-204ENST00000446996 LAMC1P11047 1609 aa31.81■■■□□ 2.68
APOE-204ENST00000446996 XRN1Q8IZH2 1706 aaKnown RBP31.8■■■□□ 2.68
APOE-204ENST00000446996 PROSER2Q86WR7 435 aaPredicted RBP31.79■■■□□ 2.68
APOE-204ENST00000446996 KDM2AQ9Y2K7 1162 aa31.79■■■□□ 2.68
APOE-204ENST00000446996 NCOA3Q9Y6Q9 1424 aa31.79■■■□□ 2.68
APOE-204ENST00000446996 NEUROD1Q13562 356 aa31.78■■■□□ 2.68
APOE-204ENST00000446996 PRAG1Q86YV5 1406 aa31.77■■■□□ 2.68
APOE-204ENST00000446996 XIRP1Q702N8 1843 aaKnown RBP31.76■■■□□ 2.67
APOE-204ENST00000446996 TMEM94Q12767 1356 aa31.74■■■□□ 2.67
APOE-204ENST00000446996 L3MBTL2Q969R5 705 aa31.74■■■□□ 2.67
APOE-204ENST00000446996 CFAP70Q5T0N1 1121 aa31.72■■■□□ 2.67
APOE-204ENST00000446996 PTCH1Q13635 1447 aa31.69■■■□□ 2.66
APOE-204ENST00000446996 LRPPRCP42704 1394 aaKnown RBP31.68■■■□□ 2.66
APOE-204ENST00000446996 KIAA1210Q9ULL0 1709 aa31.68■■■□□ 2.66
APOE-204ENST00000446996 ASXL1Q8IXJ9 1541 aa31.68■■■□□ 2.66
APOE-204ENST00000446996 ABCC11Q96J66 1382 aa31.68■■■□□ 2.66
APOE-204ENST00000446996 TECPR2O15040 1411 aa31.66■■■□□ 2.66
APOE-204ENST00000446996 KNDC1Q76NI1 1749 aa31.65■■■□□ 2.66
APOE-204ENST00000446996 TONSLQ96HA7 1378 aa31.65■■■□□ 2.66
APOE-204ENST00000446996 TOM1O60784 492 aa31.64■■■□□ 2.66
APOE-204ENST00000446996 TMEM132EQ6IEE7 984 aa31.64■■■□□ 2.66
APOE-204ENST00000446996 SIRT1Q96EB6 747 aa31.64■■■□□ 2.66
APOE-204ENST00000446996 YTHDC2Q9H6S0 1430 aaKnown RBP31.64■■■□□ 2.66
APOE-204ENST00000446996 ADGRB1O14514 1584 aa31.62■■■□□ 2.65
APOE-204ENST00000446996 MSH6P52701 1360 aa31.6■■■□□ 2.65
APOE-204ENST00000446996 UBAP1LF5GYI3 381 aa31.6■■■□□ 2.65
APOE-204ENST00000446996 TIMELESSQ9UNS1 1208 aa31.6■■■□□ 2.65
APOE-204ENST00000446996 ROBO2Q9HCK4 1378 aa31.59■■■□□ 2.65
APOE-204ENST00000446996 C19orf44Q9H6X5 657 aa31.59■■■□□ 2.65
APOE-204ENST00000446996 CCER1Q8TC90 406 aaPredicted RBP31.58■■■□□ 2.65
APOE-204ENST00000446996 RBM33Q96EV2 1170 aaKnown RBP31.58■■■□□ 2.65
APOE-204ENST00000446996 FAM135BQ49AJ0 1406 aa31.57■■■□□ 2.64
APOE-204ENST00000446996 DLC1Q96QB1 1528 aa31.55■■■□□ 2.64
APOE-204ENST00000446996 STK26Q9P289 416 aa31.55■■■□□ 2.64
APOE-204ENST00000446996 C14orf37Q86TY3 774 aa31.54■■■□□ 2.64
APOE-204ENST00000446996 DCCP43146 1447 aa31.54■■■□□ 2.64
APOE-204ENST00000446996 ADGRL3Q9HAR2 1447 aa31.53■■■□□ 2.64
APOE-204ENST00000446996 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.52■■■□□ 2.64
APOE-204ENST00000446996 CADPS2Q86UW7 1296 aa31.51■■■□□ 2.63
APOE-204ENST00000446996 TRPM1Q7Z4N2 1603 aa31.49■■■□□ 2.63
APOE-204ENST00000446996 ATF3P18847 181 aa31.47■■■□□ 2.63
APOE-204ENST00000446996 NALCNQ8IZF0 1738 aa31.46■■■□□ 2.63
APOE-204ENST00000446996 NBPF1Q3BBV0 1214 aa31.46■■■□□ 2.63
APOE-204ENST00000446996 NBPF8Q3BBV2 869 aa31.45■■■□□ 2.63
APOE-204ENST00000446996 WAPLQ7Z5K2 1190 aa31.45■■■□□ 2.63
APOE-204ENST00000446996 TRAK1Q9UPV9 953 aa31.44■■■□□ 2.62
APOE-204ENST00000446996 SLAIN2Q9P270 581 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms