RNA–Protein interactions for RNA: ENST00000446961.2

LRRC20-207, Transcript of leucine rich repeat containing 20, humanhuman

TSL 2

Gene LRRC20, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC20-207ENST00000446961 LRP6O75581 1613 aa23.51■■□□□ 1.35
LRRC20-207ENST00000446961 SLC26A8Q96RN1 970 aa23.5■■□□□ 1.35
LRRC20-207ENST00000446961 SHPRHQ149N8 1683 aa23.49■■□□□ 1.35
LRRC20-207ENST00000446961 AHDC1Q5TGY3 1603 aaPredicted RBP23.48■■□□□ 1.35
LRRC20-207ENST00000446961 RBM33Q96EV2 1170 aaKnown RBP23.48■■□□□ 1.35
LRRC20-207ENST00000446961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.48■■□□□ 1.356e-6■□□□□ 11
LRRC20-207ENST00000446961 PROSER2Q86WR7 435 aaPredicted RBP23.47■■□□□ 1.35
LRRC20-207ENST00000446961 MSH6P52701 1360 aa23.47■■□□□ 1.35
LRRC20-207ENST00000446961 JCADQ9P266 1359 aa23.47■■□□□ 1.35
LRRC20-207ENST00000446961 PLEKHG1Q9ULL1 1385 aa23.47■■□□□ 1.35
LRRC20-207ENST00000446961 ANKRD30AQ9BXX3 1397 aa23.46■■□□□ 1.35
LRRC20-207ENST00000446961 STAG3Q9UJ98 1225 aa23.45■■□□□ 1.34
LRRC20-207ENST00000446961 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.45■■□□□ 1.34
LRRC20-207ENST00000446961 UNC13BO14795 1591 aa23.44■■□□□ 1.34
LRRC20-207ENST00000446961 DIP2AQ14689 1571 aa23.44■■□□□ 1.34
LRRC20-207ENST00000446961 NCOA3Q9Y6Q9 1424 aa23.42■■□□□ 1.34
LRRC20-207ENST00000446961 SLC52A1Q9NWF4 448 aa23.41■■□□□ 1.34
LRRC20-207ENST00000446961 SLAIN2Q9P270 581 aa23.4■■□□□ 1.34
LRRC20-207ENST00000446961 ADAMTS13Q76LX8 1427 aa23.4■■□□□ 1.34
LRRC20-207ENST00000446961 RIMS2Q9UQ26 1411 aa23.4■■□□□ 1.34
LRRC20-207ENST00000446961 E9PCH4 1651 aa23.39■■□□□ 1.34
LRRC20-207ENST00000446961 LOC105371045A0A1W2PR82 267 aa23.35■■□□□ 1.33
LRRC20-207ENST00000446961 XRN1Q8IZH2 1706 aaKnown RBP23.35■■□□□ 1.33
LRRC20-207ENST00000446961 ANKRD50Q9ULJ7 1429 aa23.34■■□□□ 1.33
LRRC20-207ENST00000446961 CHIC2Q9UKJ5 165 aa23.34■■□□□ 1.33
LRRC20-207ENST00000446961 SPATA31A6Q5VVP1 1343 aa23.33■■□□□ 1.33
LRRC20-207ENST00000446961 NRXN3Q9Y4C0 1643 aa23.33■■□□□ 1.33
LRRC20-207ENST00000446961 NHSL1Q5SYE7 1610 aa23.33■■□□□ 1.32
LRRC20-207ENST00000446961 IQGAP3Q86VI3 1631 aa23.33■■□□□ 1.32
LRRC20-207ENST00000446961 PIK3R4Q99570 1358 aa23.3■■□□□ 1.32
LRRC20-207ENST00000446961 TRPM2O94759 1503 aa23.3■■□□□ 1.32
LRRC20-207ENST00000446961 TBX22Q9Y458 520 aa23.3■■□□□ 1.32
LRRC20-207ENST00000446961 CDK12Q9NYV4 1490 aaPredicted RBP23.29■■□□□ 1.32
LRRC20-207ENST00000446961 PTPRUQ92729 1446 aa23.27■■□□□ 1.32
LRRC20-207ENST00000446961 DCCP43146 1447 aa23.26■■□□□ 1.31
LRRC20-207ENST00000446961 UPF1Q92900 1129 aaKnown RBP eCLIP23.26■■□□□ 1.31
LRRC20-207ENST00000446961 ASXL1Q8IXJ9 1541 aa23.26■■□□□ 1.31
LRRC20-207ENST00000446961 SETBP1Q9Y6X0 1596 aa23.24■■□□□ 1.31
LRRC20-207ENST00000446961 PPP1R15AO75807 674 aaPredicted RBP23.22■■□□□ 1.31
LRRC20-207ENST00000446961 BCANQ96GW7 911 aa23.22■■□□□ 1.31
LRRC20-207ENST00000446961 ZNF772Q68DY9 489 aaPredicted RBP23.21■■□□□ 1.31
LRRC20-207ENST00000446961 CADPS2Q86UW7 1296 aa23.21■■□□□ 1.31
LRRC20-207ENST00000446961 SETD5Q9C0A6 1442 aa23.21■■□□□ 1.31
LRRC20-207ENST00000446961 NALCNQ8IZF0 1738 aa23.2■■□□□ 1.3
LRRC20-207ENST00000446961 MST1RQ04912 1400 aa23.2■■□□□ 1.3
LRRC20-207ENST00000446961 C19orf44Q9H6X5 657 aa23.2■■□□□ 1.3
LRRC20-207ENST00000446961 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.19■■□□□ 1.3
LRRC20-207ENST00000446961 BRINP3Q76B58 766 aa23.18■■□□□ 1.3
LRRC20-207ENST00000446961 SPHKAPQ2M3C7 1700 aa23.18■■□□□ 1.3
LRRC20-207ENST00000446961 LAMC1P11047 1609 aa23.18■■□□□ 1.3
LRRC20-207ENST00000446961 HDGFP51858 240 aaKnown RBP23.17■■□□□ 1.3
LRRC20-207ENST00000446961 TRIM52Q96A61 297 aa23.15■■□□□ 1.3
LRRC20-207ENST00000446961 APLP2Q06481 763 aa23.14■■□□□ 1.29
LRRC20-207ENST00000446961 MEX3CQ5U5Q3 659 aaKnown RBP23.14■■□□□ 1.29
LRRC20-207ENST00000446961 RGS12O14924 1447 aa23.14■■□□□ 1.29
LRRC20-207ENST00000446961 ATF3P18847 181 aa23.13■■□□□ 1.29
LRRC20-207ENST00000446961 ROCK1Q13464 1354 aa23.13■■□□□ 1.29
LRRC20-207ENST00000446961 NUTM2DQ5VT03 806 aaPredicted RBP23.12■■□□□ 1.29
LRRC20-207ENST00000446961 C14orf37Q86TY3 774 aa23.12■■□□□ 1.29
LRRC20-207ENST00000446961 ADGRL3Q9HAR2 1447 aa23.1■■□□□ 1.29
LRRC20-207ENST00000446961 AMOTL2Q9Y2J4 779 aa23.1■■□□□ 1.29
LRRC20-207ENST00000446961 RXRBP28702 533 aa23.09■■□□□ 1.29
LRRC20-207ENST00000446961 AFF2P51816 1311 aa23.08■■□□□ 1.29
LRRC20-207ENST00000446961 NEXMIFQ5QGS0 1516 aa23.08■■□□□ 1.29
LRRC20-207ENST00000446961 FAM50AQ14320 339 aaKnown RBP23.08■■□□□ 1.29
LRRC20-207ENST00000446961 PNPLA6Q8IY17 1366 aa23.08■■□□□ 1.29
LRRC20-207ENST00000446961 CHGAP10645 457 aaKnown RBP23.06■■□□□ 1.28
LRRC20-207ENST00000446961 CLTCL1P53675 1640 aa23.05■■□□□ 1.28
LRRC20-207ENST00000446961 METP08581 1390 aa23.04■■□□□ 1.28
LRRC20-207ENST00000446961 COL22A1Q8NFW1 1626 aaPredicted RBP23.02■■□□□ 1.28
LRRC20-207ENST00000446961 NUTM2BA6NNL0 878 aaPredicted RBP23.02■■□□□ 1.28
LRRC20-207ENST00000446961 NUTM2EB1AL46 878 aaPredicted RBP23.02■■□□□ 1.28
LRRC20-207ENST00000446961 NUTM2AQ8IVF1 878 aaPredicted RBP23.02■■□□□ 1.28
LRRC20-207ENST00000446961 PRAG1Q86YV5 1406 aa23.01■■□□□ 1.27
LRRC20-207ENST00000446961 SRCAPQ6ZRS2 3230 aa23.01■■□□□ 1.27
LRRC20-207ENST00000446961 NUP155O75694 1391 aa23■■□□□ 1.27
LRRC20-207ENST00000446961 PTCH1Q13635 1447 aa22.99■■□□□ 1.27
LRRC20-207ENST00000446961 C1orf167Q5SNV9 1468 aa22.98■■□□□ 1.27
LRRC20-207ENST00000446961 LRRC59Q96AG4 307 aaKnown RBP22.97■■□□□ 1.27
LRRC20-207ENST00000446961 KIF1BO60333 1816 aa22.96■■□□□ 1.27
LRRC20-207ENST00000446961 RBM6P78332 1123 aaKnown RBP22.95■■□□□ 1.26
LRRC20-207ENST00000446961 DDX17Q92841 729 aaKnown RBP22.95■■□□□ 1.26
LRRC20-207ENST00000446961 MARF1Q9Y4F3 1742 aaKnown RBP22.95■■□□□ 1.26
LRRC20-207ENST00000446961 EP400Q96L91 3159 aa22.94■■□□□ 1.26
LRRC20-207ENST00000446961 C8orf37Q96NL8 207 aa22.93■■□□□ 1.26
LRRC20-207ENST00000446961 QTRT2Q9H974 415 aaKnown RBP22.91■■□□□ 1.26
LRRC20-207ENST00000446961 SOS2Q07890 1332 aaPredicted RBP22.89■■□□□ 1.26
LRRC20-207ENST00000446961 MYOM2P54296 1465 aa22.89■■□□□ 1.25
LRRC20-207ENST00000446961 ATRNO75882 1429 aa22.89■■□□□ 1.25
LRRC20-207ENST00000446961 PPLO60437 1756 aa22.88■■□□□ 1.25
LRRC20-207ENST00000446961 CDC42BPGQ6DT37 1551 aa22.88■■□□□ 1.25
LRRC20-207ENST00000446961 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.88■■□□□ 1.25
LRRC20-207ENST00000446961 ATAD2Q6PL18 1390 aa22.88■■□□□ 1.25
LRRC20-207ENST00000446961 ROBO2Q9HCK4 1378 aa22.87■■□□□ 1.25
LRRC20-207ENST00000446961 PXDNQ92626 1479 aa22.84■■□□□ 1.25
LRRC20-207ENST00000446961 FNBP4Q8N3X1 1017 aaPredicted RBP22.82■■□□□ 1.24
LRRC20-207ENST00000446961 ADAMTS2O95450 1211 aa22.81■■□□□ 1.24
LRRC20-207ENST00000446961 BCL9LQ86UU0 1499 aa22.8■■□□□ 1.24
LRRC20-207ENST00000446961 ZNF326Q5BKZ1 582 aaKnown RBP22.8■■□□□ 1.24
LRRC20-207ENST00000446961 NGLY1Q96IV0 654 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms