RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 RIMS2Q9UQ26 1411 aa23.56■■□□□ 1.36
HMGB2-203ENST00000446922 DISP3Q9P2K9 1392 aa23.55■■□□□ 1.36
HMGB2-203ENST00000446922 SLC26A8Q96RN1 970 aa23.55■■□□□ 1.36
HMGB2-203ENST00000446922 SCAF1Q9H7N4 1312 aaKnown RBP23.55■■□□□ 1.36
HMGB2-203ENST00000446922 NAIPQ13075 1403 aa23.54■■□□□ 1.36
HMGB2-203ENST00000446922 TBX22Q9Y458 520 aa23.53■■□□□ 1.36
HMGB2-203ENST00000446922 ALKQ9UM73 1620 aa23.52■■□□□ 1.36
HMGB2-203ENST00000446922 PPP1R15AO75807 674 aaPredicted RBP23.52■■□□□ 1.36
HMGB2-203ENST00000446922 CHGAP10645 457 aaKnown RBP23.52■■□□□ 1.36
HMGB2-203ENST00000446922 HSPA1LP34931 641 aa23.52■■□□□ 1.36
HMGB2-203ENST00000446922 BCANQ96GW7 911 aa23.52■■□□□ 1.36
HMGB2-203ENST00000446922 MYO5BQ9ULV0 1848 aa23.49■■□□□ 1.35
HMGB2-203ENST00000446922 NKTRP30414 1462 aaKnown RBP23.49■■□□□ 1.35
HMGB2-203ENST00000446922 PROSER2Q86WR7 435 aaPredicted RBP23.49■■□□□ 1.35
HMGB2-203ENST00000446922 HFM1A2PYH4 1435 aa23.49■■□□□ 1.35
HMGB2-203ENST00000446922 TMEM94Q12767 1356 aa23.47■■□□□ 1.35
HMGB2-203ENST00000446922 NWD1Q149M9 1564 aa23.47■■□□□ 1.35
HMGB2-203ENST00000446922 PIK3R4Q99570 1358 aa23.46■■□□□ 1.35
HMGB2-203ENST00000446922 XIRP1Q702N8 1843 aaKnown RBP23.45■■□□□ 1.34
HMGB2-203ENST00000446922 SPHKAPQ2M3C7 1700 aa23.44■■□□□ 1.34
HMGB2-203ENST00000446922 DIP2AQ14689 1571 aa23.44■■□□□ 1.34
HMGB2-203ENST00000446922 NCOA3Q9Y6Q9 1424 aa23.43■■□□□ 1.34
HMGB2-203ENST00000446922 CHD2O14647 1828 aaKnown RBP23.43■■□□□ 1.34
HMGB2-203ENST00000446922 FAM135BQ49AJ0 1406 aa23.42■■□□□ 1.34
HMGB2-203ENST00000446922 ACIN1Q9UKV3 1341 aaKnown RBP23.4■■□□□ 1.34
HMGB2-203ENST00000446922 ADAMTS13Q76LX8 1427 aa23.4■■□□□ 1.34
HMGB2-203ENST00000446922 TRIM52Q96A61 297 aa23.39■■□□□ 1.33
HMGB2-203ENST00000446922 TRPM2O94759 1503 aa23.38■■□□□ 1.33
HMGB2-203ENST00000446922 MSH6P52701 1360 aa23.37■■□□□ 1.33
HMGB2-203ENST00000446922 ZNF326Q5BKZ1 582 aaKnown RBP23.35■■□□□ 1.33
HMGB2-203ENST00000446922 NUTM2DQ5VT03 806 aaPredicted RBP23.35■■□□□ 1.33
HMGB2-203ENST00000446922 ILDR2Q71H61 639 aa23.35■■□□□ 1.33
HMGB2-203ENST00000446922 SLC4A1APQ9BWU0 796 aaKnown RBP23.35■■□□□ 1.33
HMGB2-203ENST00000446922 SETBP1Q9Y6X0 1596 aa23.31■■□□□ 1.32
HMGB2-203ENST00000446922 SLAIN2Q9P270 581 aa23.31■■□□□ 1.32
HMGB2-203ENST00000446922 CLTCL1P53675 1640 aa23.3■■□□□ 1.32
HMGB2-203ENST00000446922 RBM33Q96EV2 1170 aaKnown RBP23.3■■□□□ 1.32
HMGB2-203ENST00000446922 AMOTL2Q9Y2J4 779 aa23.3■■□□□ 1.32
HMGB2-203ENST00000446922 RPGRIP1LQ68CZ1 1315 aa23.3■■□□□ 1.32
HMGB2-203ENST00000446922 MED1Q15648 1581 aaPredicted RBP23.29■■□□□ 1.32
HMGB2-203ENST00000446922 C19orf44Q9H6X5 657 aa23.29■■□□□ 1.32
HMGB2-203ENST00000446922 KIF1BO60333 1816 aa23.29■■□□□ 1.32
HMGB2-203ENST00000446922 SOCS7O14512 581 aa23.28■■□□□ 1.32
HMGB2-203ENST00000446922 VGFO15240 615 aaPredicted RBP23.28■■□□□ 1.32
HMGB2-203ENST00000446922 CADPS2Q86UW7 1296 aa23.26■■□□□ 1.31
HMGB2-203ENST00000446922 NEXMIFQ5QGS0 1516 aa23.26■■□□□ 1.31
HMGB2-203ENST00000446922 PTPRUQ92729 1446 aa23.25■■□□□ 1.31
HMGB2-203ENST00000446922 NRXN3Q9Y4C0 1643 aa23.24■■□□□ 1.31
HMGB2-203ENST00000446922 ROBO1Q9Y6N7 1651 aa23.23■■□□□ 1.31
HMGB2-203ENST00000446922 C14orf37Q86TY3 774 aa23.23■■□□□ 1.31
HMGB2-203ENST00000446922 ATF3P18847 181 aa23.22■■□□□ 1.31
HMGB2-203ENST00000446922 MPHOSPH9Q99550 1183 aa23.21■■□□□ 1.31
HMGB2-203ENST00000446922 DCCP43146 1447 aa23.2■■□□□ 1.3
HMGB2-203ENST00000446922 METP08581 1390 aa23.19■■□□□ 1.3
HMGB2-203ENST00000446922 XRN1Q8IZH2 1706 aaKnown RBP23.19■■□□□ 1.3
HMGB2-203ENST00000446922 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.17■■□□□ 1.3
HMGB2-203ENST00000446922 SETD5Q9C0A6 1442 aa23.16■■□□□ 1.3
HMGB2-203ENST00000446922 CCDC144AA2RUR9 1427 aa23.16■■□□□ 1.3
HMGB2-203ENST00000446922 FOXD1Q16676 465 aa23.12■■□□□ 1.29
HMGB2-203ENST00000446922 PRAG1Q86YV5 1406 aa23.11■■□□□ 1.29
HMGB2-203ENST00000446922 JCADQ9P266 1359 aa23.11■■□□□ 1.29
HMGB2-203ENST00000446922 ANKRD30BQ9BXX2 1392 aa23.1■■□□□ 1.29
HMGB2-203ENST00000446922 PHLPP1O60346 1717 aa23.1■■□□□ 1.29
HMGB2-203ENST00000446922 PPLO60437 1756 aa23.09■■□□□ 1.29
HMGB2-203ENST00000446922 PTCH1Q13635 1447 aa23.08■■□□□ 1.29
HMGB2-203ENST00000446922 SPATA31E1Q6ZUB1 1445 aa23.08■■□□□ 1.29
HMGB2-203ENST00000446922 ADGRL3Q9HAR2 1447 aa23.08■■□□□ 1.28
HMGB2-203ENST00000446922 HRCP23327 699 aa23.07■■□□□ 1.28
HMGB2-203ENST00000446922 AHDC1Q5TGY3 1603 aaPredicted RBP23.07■■□□□ 1.28
HMGB2-203ENST00000446922 SETD1AO15047 1707 aaKnown RBP23.06■■□□□ 1.28
HMGB2-203ENST00000446922 BRINP3Q76B58 766 aa23.06■■□□□ 1.28
HMGB2-203ENST00000446922 COL16A1Q07092 1604 aaPredicted RBP23.04■■□□□ 1.28
HMGB2-203ENST00000446922 MST1RQ04912 1400 aa23.04■■□□□ 1.28
HMGB2-203ENST00000446922 SPATA31A6Q5VVP1 1343 aa23.04■■□□□ 1.28
HMGB2-203ENST00000446922 RGL3Q3MIN7 710 aa23.03■■□□□ 1.28
HMGB2-203ENST00000446922 RAB3GAP2Q9H2M9 1393 aa23.02■■□□□ 1.28
HMGB2-203ENST00000446922 RGS17Q9UGC6 210 aaPredicted RBP23.02■■□□□ 1.28
HMGB2-203ENST00000446922 ADGRF5Q8IZF2 1346 aa23.02■■□□□ 1.28
HMGB2-203ENST00000446922 ROBO2Q9HCK4 1378 aa23■■□□□ 1.27
HMGB2-203ENST00000446922 IFT172Q9UG01 1749 aa22.98■■□□□ 1.27
HMGB2-203ENST00000446922 ASXL1Q8IXJ9 1541 aa22.98■■□□□ 1.27
HMGB2-203ENST00000446922 NALCNQ8IZF0 1738 aa22.97■■□□□ 1.27
HMGB2-203ENST00000446922 LRRC59Q96AG4 307 aaKnown RBP22.96■■□□□ 1.27
HMGB2-203ENST00000446922 TECPR2O15040 1411 aa22.95■■□□□ 1.26
HMGB2-203ENST00000446922 PIK3C2GO75747 1445 aa22.95■■□□□ 1.26
HMGB2-203ENST00000446922 SHPRHQ149N8 1683 aa22.95■■□□□ 1.26
HMGB2-203ENST00000446922 ABCC11Q96J66 1382 aa22.95■■□□□ 1.26
HMGB2-203ENST00000446922 C1orf167Q5SNV9 1468 aa22.94■■□□□ 1.26
HMGB2-203ENST00000446922 LRPPRCP42704 1394 aaKnown RBP22.94■■□□□ 1.26
HMGB2-203ENST00000446922 SIRT1Q96EB6 747 aa22.94■■□□□ 1.26
HMGB2-203ENST00000446922 NHSL1Q5SYE7 1610 aa22.93■■□□□ 1.26
HMGB2-203ENST00000446922 STAC3Q96MF2 364 aa22.92■■□□□ 1.26
HMGB2-203ENST00000446922 C14orf93Q9H972 538 aaKnown RBP22.92■■□□□ 1.26
HMGB2-203ENST00000446922 MYOM2P54296 1465 aa22.9■■□□□ 1.26
HMGB2-203ENST00000446922 NRXN1Q9ULB1 1477 aa22.9■■□□□ 1.26
HMGB2-203ENST00000446922 POTEAQ6S8J7 498 aa22.89■■□□□ 1.25
HMGB2-203ENST00000446922 LAMC1P11047 1609 aa22.88■■□□□ 1.25
HMGB2-203ENST00000446922 STK26Q9P289 416 aa22.87■■□□□ 1.25
HMGB2-203ENST00000446922 CDC42BPGQ6DT37 1551 aa22.86■■□□□ 1.25
HMGB2-203ENST00000446922 YTHDC2Q9H6S0 1430 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms