RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 PIP4K2BP78356 416 aa35.6■■■■□ 3.29
C9orf3-207ENST00000445181 SLC26A8Q96RN1 970 aa35.59■■■■□ 3.29
C9orf3-207ENST00000445181 SPHKAPQ2M3C7 1700 aa35.58■■■■□ 3.29
C9orf3-207ENST00000445181 HDGFP51858 240 aaKnown RBP35.58■■■■□ 3.29
C9orf3-207ENST00000445181 BCANQ96GW7 911 aa35.58■■■■□ 3.29
C9orf3-207ENST00000445181 TMEM131LA2VDJ0 1609 aa35.57■■■■□ 3.29
C9orf3-207ENST00000445181 RIMS2Q9UQ26 1411 aa35.56■■■■□ 3.28
C9orf3-207ENST00000445181 MYO5BQ9ULV0 1848 aa35.55■■■■□ 3.28
C9orf3-207ENST00000445181 ZFYVE9O95405 1425 aa35.55■■■■□ 3.28
C9orf3-207ENST00000445181 PPP1R15AO75807 674 aaPredicted RBP35.54■■■■□ 3.28
C9orf3-207ENST00000445181 MPHOSPH9Q99550 1183 aa35.53■■■■□ 3.28
C9orf3-207ENST00000445181 SENP3Q9H4L4 574 aaPredicted RBP35.53■■■■□ 3.28
C9orf3-207ENST00000445181 KCNA6P17658 529 aa35.5■■■■□ 3.27
C9orf3-207ENST00000445181 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.49■■■■□ 3.27
C9orf3-207ENST00000445181 PLEKHG1Q9ULL1 1385 aa35.48■■■■□ 3.27
C9orf3-207ENST00000445181 TRPM2O94759 1503 aa35.47■■■■□ 3.27
C9orf3-207ENST00000445181 FOXD1Q16676 465 aa35.47■■■■□ 3.27
C9orf3-207ENST00000445181 NUTM2DQ5VT03 806 aaPredicted RBP35.45■■■■□ 3.27
C9orf3-207ENST00000445181 ALKQ9UM73 1620 aa35.45■■■■□ 3.27
C9orf3-207ENST00000445181 HSPA1LP34931 641 aa35.44■■■■□ 3.26
C9orf3-207ENST00000445181 DISP3Q9P2K9 1392 aa35.42■■■■□ 3.26
C9orf3-207ENST00000445181 HRCP23327 699 aa35.41■■■■□ 3.26
C9orf3-207ENST00000445181 PROSER2Q86WR7 435 aaPredicted RBP35.41■■■■□ 3.26
C9orf3-207ENST00000445181 CLTCL1P53675 1640 aa35.4■■■■□ 3.26
C9orf3-207ENST00000445181 TMEM94Q12767 1356 aa35.38■■■■□ 3.26
C9orf3-207ENST00000445181 XIRP1Q702N8 1843 aaKnown RBP35.37■■■■□ 3.25
C9orf3-207ENST00000445181 TBX22Q9Y458 520 aa35.37■■■■□ 3.25
C9orf3-207ENST00000445181 ZNF326Q5BKZ1 582 aaKnown RBP35.36■■■■□ 3.25
C9orf3-207ENST00000445181 RBM33Q96EV2 1170 aaKnown RBP35.34■■■■□ 3.25
C9orf3-207ENST00000445181 NWD1Q149M9 1564 aa35.33■■■■□ 3.25
C9orf3-207ENST00000445181 KIF1BO60333 1816 aa35.32■■■■□ 3.24
C9orf3-207ENST00000445181 NKTRP30414 1462 aaKnown RBP35.31■■■■□ 3.24
C9orf3-207ENST00000445181 TRIM26Q12899 539 aaPredicted RBP35.31■■■■□ 3.24
C9orf3-207ENST00000445181 CCDC144AA2RUR9 1427 aa35.3■■■■□ 3.24
C9orf3-207ENST00000445181 ADAMTS13Q76LX8 1427 aa35.3■■■■□ 3.24
C9orf3-207ENST00000445181 CHD2O14647 1828 aaKnown RBP35.26■■■■□ 3.24
C9orf3-207ENST00000445181 DIP2AQ14689 1571 aa35.22■■■■□ 3.23
C9orf3-207ENST00000445181 PIK3R4Q99570 1358 aa35.2■■■■□ 3.23
C9orf3-207ENST00000445181 MSH6P52701 1360 aa35.18■■■■□ 3.22
C9orf3-207ENST00000445181 ILDR2Q71H61 639 aa35.15■■■■□ 3.22
C9orf3-207ENST00000445181 FAM135BQ49AJ0 1406 aa35.15■■■■□ 3.22
C9orf3-207ENST00000445181 NEXMIFQ5QGS0 1516 aa35.14■■■■□ 3.22
C9orf3-207ENST00000445181 AMOTL2Q9Y2J4 779 aa35.13■■■■□ 3.21
C9orf3-207ENST00000445181 RGL3Q3MIN7 710 aa35.12■■■■□ 3.21
C9orf3-207ENST00000445181 SETBP1Q9Y6X0 1596 aa35.12■■■■□ 3.21
C9orf3-207ENST00000445181 RPGRIP1LQ68CZ1 1315 aa35.11■■■■□ 3.21
C9orf3-207ENST00000445181 C14orf37Q86TY3 774 aa35.11■■■■□ 3.21
C9orf3-207ENST00000445181 NRXN3Q9Y4C0 1643 aa35.1■■■■□ 3.21
C9orf3-207ENST00000445181 PTPRUQ92729 1446 aa35.1■■■■□ 3.21
C9orf3-207ENST00000445181 ANKRD30BQ9BXX2 1392 aa35.1■■■■□ 3.21
C9orf3-207ENST00000445181 NCOA3Q9Y6Q9 1424 aa35.09■■■■□ 3.21
C9orf3-207ENST00000445181 VGFO15240 615 aaPredicted RBP35.07■■■■□ 3.2
C9orf3-207ENST00000445181 SLAIN2Q9P270 581 aa35.07■■■■□ 3.2
C9orf3-207ENST00000445181 SPATA31E1Q6ZUB1 1445 aa35.06■■■■□ 3.2
C9orf3-207ENST00000445181 MED1Q15648 1581 aaPredicted RBP35.04■■■■□ 3.2
C9orf3-207ENST00000445181 METP08581 1390 aa35.04■■■■□ 3.2
C9orf3-207ENST00000445181 C19orf44Q9H6X5 657 aa35.02■■■■□ 3.2
C9orf3-207ENST00000445181 ROBO1Q9Y6N7 1651 aa35.01■■■■□ 3.2
C9orf3-207ENST00000445181 PPLO60437 1756 aa35.01■■■■□ 3.2
C9orf3-207ENST00000445181 ATF3P18847 181 aa34.97■■■■□ 3.19
C9orf3-207ENST00000445181 CADPS2Q86UW7 1296 aa34.97■■■■□ 3.19
C9orf3-207ENST00000445181 XRN1Q8IZH2 1706 aaKnown RBP34.96■■■■□ 3.19
C9orf3-207ENST00000445181 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.94■■■■□ 3.18
C9orf3-207ENST00000445181 IFT172Q9UG01 1749 aa34.9■■■■□ 3.18
C9orf3-207ENST00000445181 ADGRF5Q8IZF2 1346 aa34.89■■■■□ 3.18
C9orf3-207ENST00000445181 PHF23Q9BUL5 403 aaPredicted RBP34.89■■■■□ 3.18
C9orf3-207ENST00000445181 SOCS7O14512 581 aa34.85■■■■□ 3.17
C9orf3-207ENST00000445181 DCCP43146 1447 aa34.82■■■■□ 3.17
C9orf3-207ENST00000445181 PCGF6Q9BYE7 350 aa34.82■■■■□ 3.16
C9orf3-207ENST00000445181 DHX57Q6P158 1386 aaKnown RBP34.82■■■■□ 3.16
C9orf3-207ENST00000445181 SETD1AO15047 1707 aaKnown RBP34.81■■■■□ 3.16
C9orf3-207ENST00000445181 PHLPP1O60346 1717 aa34.81■■■■□ 3.16
C9orf3-207ENST00000445181 MYOM2P54296 1465 aa34.78■■■■□ 3.16
C9orf3-207ENST00000445181 DCAF11Q8TEB1 546 aa34.78■■■■□ 3.16
C9orf3-207ENST00000445181 KDM2AQ9Y2K7 1162 aa34.77■■■■□ 3.16
C9orf3-207ENST00000445181 PIK3C2GO75747 1445 aa34.77■■■■□ 3.16
C9orf3-207ENST00000445181 ADGRL3Q9HAR2 1447 aa34.77■■■■□ 3.16
C9orf3-207ENST00000445181 BRINP3Q76B58 766 aa34.75■■■■□ 3.15
C9orf3-207ENST00000445181 ROBO2Q9HCK4 1378 aa34.74■■■■□ 3.15
C9orf3-207ENST00000445181 PTCH1Q13635 1447 aa34.74■■■■□ 3.15
C9orf3-207ENST00000445181 JCADQ9P266 1359 aa34.73■■■■□ 3.15
C9orf3-207ENST00000445181 MST1RQ04912 1400 aa34.72■■■■□ 3.15
C9orf3-207ENST00000445181 NRXN1Q9ULB1 1477 aa34.71■■■■□ 3.15
C9orf3-207ENST00000445181 COL16A1Q07092 1604 aaPredicted RBP34.7■■■■□ 3.15
C9orf3-207ENST00000445181 SIN3AQ96ST3 1273 aa34.7■■■■□ 3.15
C9orf3-207ENST00000445181 NALCNQ8IZF0 1738 aa34.69■■■■□ 3.14
C9orf3-207ENST00000445181 STAC3Q96MF2 364 aa34.69■■■■□ 3.14
C9orf3-207ENST00000445181 PRAG1Q86YV5 1406 aa34.69■■■■□ 3.14
C9orf3-207ENST00000445181 NEUROD1Q13562 356 aa34.68■■■■□ 3.14
C9orf3-207ENST00000445181 AHDC1Q5TGY3 1603 aaPredicted RBP34.68■■■■□ 3.14
C9orf3-207ENST00000445181 C14orf93Q9H972 538 aaKnown RBP34.66■■■■□ 3.14
C9orf3-207ENST00000445181 RGS17Q9UGC6 210 aaPredicted RBP34.66■■■■□ 3.14
C9orf3-207ENST00000445181 CFAP70Q5T0N1 1121 aa34.65■■■■□ 3.14
C9orf3-207ENST00000445181 TMEM132EQ6IEE7 984 aa34.64■■■■□ 3.14
C9orf3-207ENST00000445181 STK26Q9P289 416 aa34.64■■■■□ 3.14
C9orf3-207ENST00000445181 ASXL1Q8IXJ9 1541 aa34.64■■■■□ 3.14
C9orf3-207ENST00000445181 LAMC1P11047 1609 aa34.63■■■■□ 3.13
C9orf3-207ENST00000445181 LRPPRCP42704 1394 aaKnown RBP34.59■■■■□ 3.13
C9orf3-207ENST00000445181 C1orf167Q5SNV9 1468 aa34.57■■■■□ 3.12
C9orf3-207ENST00000445181 SPATA31A6Q5VVP1 1343 aa34.56■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms