RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 ZFYVE9O95405 1425 aa21.78■■□□□ 1.08
CCNE1-203ENST00000444983 ARHGAP23Q9P227 1491 aa21.77■■□□□ 1.08
CCNE1-203ENST00000444983 SLIT1O75093 1534 aa21.77■■□□□ 1.08
CCNE1-203ENST00000444983 ZNF326Q5BKZ1 582 aaKnown RBP21.77■■□□□ 1.08
CCNE1-203ENST00000444983 TMEM2Q9UHN6 1383 aa21.77■■□□□ 1.08
CCNE1-203ENST00000444983 MYOM2P54296 1465 aa21.77■■□□□ 1.07
CCNE1-203ENST00000444983 THEMISQ8N1K5 641 aaPredicted RBP21.75■■□□□ 1.07
CCNE1-203ENST00000444983 NRXN1Q9ULB1 1477 aa21.75■■□□□ 1.07
CCNE1-203ENST00000444983 RIMS2Q9UQ26 1411 aa21.73■■□□□ 1.07
CCNE1-203ENST00000444983 PRAG1Q86YV5 1406 aa21.72■■□□□ 1.07
CCNE1-203ENST00000444983 KDM2AQ9Y2K7 1162 aa21.72■■□□□ 1.07
CCNE1-203ENST00000444983 LMTK3Q96Q04 1460 aa21.71■■□□□ 1.07
CCNE1-203ENST00000444983 NBPF8Q3BBV2 869 aa21.71■■□□□ 1.07
CCNE1-203ENST00000444983 ADGRF5Q8IZF2 1346 aa21.7■■□□□ 1.06
CCNE1-203ENST00000444983 VGFO15240 615 aaPredicted RBP21.7■■□□□ 1.06
CCNE1-203ENST00000444983 LTKP29376 864 aa21.69■■□□□ 1.06
CCNE1-203ENST00000444983 PIK3C2GO75747 1445 aa21.69■■□□□ 1.06
CCNE1-203ENST00000444983 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.68■■□□□ 1.06
CCNE1-203ENST00000444983 HDGFP51858 240 aaKnown RBP21.67■■□□□ 1.06
CCNE1-203ENST00000444983 NUTM2DQ5VT03 806 aaPredicted RBP21.66■■□□□ 1.06
CCNE1-203ENST00000444983 TRPM1Q7Z4N2 1603 aa21.64■■□□□ 1.05
CCNE1-203ENST00000444983 SCAF11Q99590 1463 aaKnown RBP21.63■■□□□ 1.05
CCNE1-203ENST00000444983 TXNDC2Q86VQ3 553 aa21.63■■□□□ 1.05
CCNE1-203ENST00000444983 KIAA1210Q9ULL0 1709 aa21.63■■□□□ 1.05
CCNE1-203ENST00000444983 NRXN3Q9Y4C0 1643 aa21.63■■□□□ 1.05
CCNE1-203ENST00000444983 EID1Q9Y6B2 187 aa21.63■■□□□ 1.05
CCNE1-203ENST00000444983 SETBP1Q9Y6X0 1596 aa21.62■■□□□ 1.05
CCNE1-203ENST00000444983 PLEKHG1Q9ULL1 1385 aa21.61■■□□□ 1.05
CCNE1-203ENST00000444983 ANKLE2Q86XL3 938 aa21.6■■□□□ 1.05
CCNE1-203ENST00000444983 C14orf93Q9H972 538 aaKnown RBP21.6■■□□□ 1.05
CCNE1-203ENST00000444983 RALGAPBQ86X10 1494 aa21.6■■□□□ 1.05
CCNE1-203ENST00000444983 POLR1AO95602 1720 aaPredicted RBP21.59■■□□□ 1.05
CCNE1-203ENST00000444983 MED14O60244 1454 aa21.59■■□□□ 1.05
CCNE1-203ENST00000444983 SETD1AO15047 1707 aaKnown RBP21.58■■□□□ 1.05
CCNE1-203ENST00000444983 LAMC1P11047 1609 aa21.58■■□□□ 1.04
CCNE1-203ENST00000444983 IQGAP1P46940 1657 aa21.58■■□□□ 1.04
CCNE1-203ENST00000444983 ALKQ9UM73 1620 aa21.57■■□□□ 1.04
CCNE1-203ENST00000444983 HSPA2P54652 639 aa21.57■■□□□ 1.04
CCNE1-203ENST00000444983 CFAP70Q5T0N1 1121 aa21.57■■□□□ 1.04
CCNE1-203ENST00000444983 ADAMTS13Q76LX8 1427 aa21.57■■□□□ 1.04
CCNE1-203ENST00000444983 GPRASP1Q5JY77 1395 aa21.56■■□□□ 1.04
CCNE1-203ENST00000444983 NBPF1Q3BBV0 1214 aa21.56■■□□□ 1.04
CCNE1-203ENST00000444983 ADGRB1O14514 1584 aa21.55■■□□□ 1.04
CCNE1-203ENST00000444983 STRCQ7RTU9 1775 aa21.54■■□□□ 1.04
CCNE1-203ENST00000444983 ASXL1Q8IXJ9 1541 aa21.52■■□□□ 1.04
CCNE1-203ENST00000444983 NCKAP5LQ9HCH0 1330 aa21.52■■□□□ 1.04
CCNE1-203ENST00000444983 ROCK2O75116 1388 aaKnown RBP21.51■■□□□ 1.03
CCNE1-203ENST00000444983 NPHP4O75161 1426 aaPredicted RBP21.51■■□□□ 1.03
CCNE1-203ENST00000444983 DIP2AQ14689 1571 aa21.51■■□□□ 1.03
CCNE1-203ENST00000444983 TBX22Q9Y458 520 aa21.5■■□□□ 1.03
CCNE1-203ENST00000444983 SENP3Q9H4L4 574 aaPredicted RBP21.49■■□□□ 1.03
CCNE1-203ENST00000444983 METP08581 1390 aa21.47■■□□□ 1.03
CCNE1-203ENST00000444983 TMEM132EQ6IEE7 984 aa21.47■■□□□ 1.03
CCNE1-203ENST00000444983 SLC26A8Q96RN1 970 aa21.46■■□□□ 1.03
CCNE1-203ENST00000444983 CARD11Q9BXL7 1154 aa21.46■■□□□ 1.03
CCNE1-203ENST00000444983 BCANQ96GW7 911 aa21.44■■□□□ 1.02
CCNE1-203ENST00000444983 PIK3R4Q99570 1358 aa21.43■■□□□ 1.02
CCNE1-203ENST00000444983 YTHDC2Q9H6S0 1430 aaKnown RBP21.43■■□□□ 1.02
CCNE1-203ENST00000444983 LRPPRCP42704 1394 aaKnown RBP21.41■■□□□ 1.02
CCNE1-203ENST00000444983 PTPRUQ92729 1446 aa21.41■■□□□ 1.02
CCNE1-203ENST00000444983 ABCC11Q96J66 1382 aa21.4■■□□□ 1.02
CCNE1-203ENST00000444983 USP47Q96K76 1375 aa21.4■■□□□ 1.02
CCNE1-203ENST00000444983 CHD2O14647 1828 aaKnown RBP21.4■■□□□ 1.02
CCNE1-203ENST00000444983 TECPR2O15040 1411 aa21.4■■□□□ 1.02
CCNE1-203ENST00000444983 AEBP2Q6ZN18 517 aaPredicted RBP21.39■■□□□ 1.01
CCNE1-203ENST00000444983 KNDC1Q76NI1 1749 aa21.39■■□□□ 1.01
CCNE1-203ENST00000444983 EIF4G2P78344 907 aaKnown RBP eCLIP21.37■■□□□ 1.01
CCNE1-203ENST00000444983 XRN1Q8IZH2 1706 aaKnown RBP21.37■■□□□ 1.01
CCNE1-203ENST00000444983 ARHGEF28Q8N1W1 1705 aaKnown RBP21.37■■□□□ 1.01
CCNE1-203ENST00000444983 DLC1Q96QB1 1528 aa21.37■■□□□ 1.01
CCNE1-203ENST00000444983 CPS1P31327 1500 aa21.35■■□□□ 1.01
CCNE1-203ENST00000444983 HSPA5P11021 654 aaKnown RBP21.34■■□□□ 1.01
CCNE1-203ENST00000444983 SIRT1Q96EB6 747 aa21.34■■□□□ 1.01
CCNE1-203ENST00000444983 TRAK1Q9UPV9 953 aa21.34■■□□□ 1.01
CCNE1-203ENST00000444983 NWD1Q149M9 1564 aa21.34■■□□□ 1.01
CCNE1-203ENST00000444983 AMOTL2Q9Y2J4 779 aa21.34■■□□□ 1.01
CCNE1-203ENST00000444983 STK26Q9P289 416 aa21.33■■□□□ 1
CCNE1-203ENST00000444983 DMRT2Q9Y5R5 561 aa21.33■■□□□ 1
CCNE1-203ENST00000444983 EIF3AQ14152 1382 aaKnown RBP21.32■■□□□ 1
CCNE1-203ENST00000444983 ST20-MTHFSA0A0A6YYL1 179 aa21.32■■□□□ 1
CCNE1-203ENST00000444983 FAM135BQ49AJ0 1406 aa21.32■■□□□ 1
CCNE1-203ENST00000444983 PTCH1Q13635 1447 aa21.31■■□□□ 1
CCNE1-203ENST00000444983 KCNA6P17658 529 aa21.31■■□□□ 1
CCNE1-203ENST00000444983 ROBO2Q9HCK4 1378 aa21.3■■□□□ 1
CCNE1-203ENST00000444983 TESK2Q96S53 571 aa21.3■■□□□ 1
CCNE1-203ENST00000444983 STRCP1A6NGW2 1772 aa21.3■■□□□ 1
CCNE1-203ENST00000444983 HIRIP3Q9BW71 556 aaPredicted RBP21.28■■□□□ 1
CCNE1-203ENST00000444983 SBNO2Q9Y2G9 1366 aa21.28■■□□□ 1
CCNE1-203ENST00000444983 CENPJQ9HC77 1338 aaPredicted RBP21.27■■□□□ 1
CCNE1-203ENST00000444983 PRAM1Q96QH2 718 aa21.27■■□□□ 1
CCNE1-203ENST00000444983 PLEKHH1Q9ULM0 1364 aa21.27■■□□□ 1
CCNE1-203ENST00000444983 QRICH2Q9H0J4 1663 aa21.26■□□□□ 0.99
CCNE1-203ENST00000444983 WAPLQ7Z5K2 1190 aa21.25■□□□□ 0.99
CCNE1-203ENST00000444983 NKTRP30414 1462 aaKnown RBP21.25■□□□□ 0.99
CCNE1-203ENST00000444983 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.22■□□□□ 0.99
CCNE1-203ENST00000444983 POGKQ9P215 609 aa21.21■□□□□ 0.99
CCNE1-203ENST00000444983 ZNF335Q9H4Z2 1342 aaPredicted RBP21.21■□□□□ 0.99
CCNE1-203ENST00000444983 C11orf95C9JLR9 678 aaPredicted RBP21.2■□□□□ 0.98
CCNE1-203ENST00000444983 ZNF316A6NFI3 1004 aaPredicted RBP21.19■□□□□ 0.98
CCNE1-203ENST00000444983 SLC24A1O60721 1099 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms