RNA–Protein interactions for RNA: ENST00000444688.1

LINC00299-203, long intergenic non-protein coding RNA 299, humanhuman

TSL 4 BASIC

Gene LINC00299, Length 537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-203ENST00000444688 RIMS2Q9UQ26 1411 aa19■□□□□ 0.63
LINC00299-203ENST00000444688 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.99■□□□□ 0.63
LINC00299-203ENST00000444688 MYO5BQ9ULV0 1848 aa18.99■□□□□ 0.63
LINC00299-203ENST00000444688 NEXMIFQ5QGS0 1516 aa18.99■□□□□ 0.63
LINC00299-203ENST00000444688 ZFYVE9O95405 1425 aa18.99■□□□□ 0.63
LINC00299-203ENST00000444688 DCAF11Q8TEB1 546 aa18.97■□□□□ 0.63
LINC00299-203ENST00000444688 MYOM2P54296 1465 aa18.97■□□□□ 0.63
LINC00299-203ENST00000444688 EID1Q9Y6B2 187 aa18.96■□□□□ 0.63
LINC00299-203ENST00000444688 IFT172Q9UG01 1749 aa18.95■□□□□ 0.62
LINC00299-203ENST00000444688 VGFO15240 615 aaPredicted RBP18.95■□□□□ 0.62
LINC00299-203ENST00000444688 PPLO60437 1756 aa18.95■□□□□ 0.62
LINC00299-203ENST00000444688 PPP1R15AO75807 674 aaPredicted RBP18.94■□□□□ 0.62
LINC00299-203ENST00000444688 AEBP2Q6ZN18 517 aaPredicted RBP18.94■□□□□ 0.62
LINC00299-203ENST00000444688 ANKLE2Q86XL3 938 aa18.94■□□□□ 0.62
LINC00299-203ENST00000444688 SCAF11Q99590 1463 aaKnown RBP18.93■□□□□ 0.62
LINC00299-203ENST00000444688 ZEB1P37275 1124 aaPredicted RBP18.93■□□□□ 0.62
LINC00299-203ENST00000444688 TXNDC2Q86VQ3 553 aa18.93■□□□□ 0.62
LINC00299-203ENST00000444688 KDM2AQ9Y2K7 1162 aa18.92■□□□□ 0.62
LINC00299-203ENST00000444688 NRXN1Q9ULB1 1477 aa18.91■□□□□ 0.62
LINC00299-203ENST00000444688 LTKP29376 864 aa18.91■□□□□ 0.62
LINC00299-203ENST00000444688 HSPA2P54652 639 aa18.9■□□□□ 0.62
LINC00299-203ENST00000444688 NUTM2DQ5VT03 806 aaPredicted RBP18.9■□□□□ 0.62
LINC00299-203ENST00000444688 ADGRF5Q8IZF2 1346 aa18.9■□□□□ 0.62
LINC00299-203ENST00000444688 PLEKHG1Q9ULL1 1385 aa18.9■□□□□ 0.62
LINC00299-203ENST00000444688 PIK3C2GO75747 1445 aa18.88■□□□□ 0.61
LINC00299-203ENST00000444688 PRAG1Q86YV5 1406 aa18.88■□□□□ 0.61
LINC00299-203ENST00000444688 MED14O60244 1454 aa18.87■□□□□ 0.61
LINC00299-203ENST00000444688 SETBP1Q9Y6X0 1596 aa18.85■□□□□ 0.61
LINC00299-203ENST00000444688 NCKAP5LQ9HCH0 1330 aa18.85■□□□□ 0.61
LINC00299-203ENST00000444688 POLR1AO95602 1720 aaPredicted RBP18.85■□□□□ 0.61
LINC00299-203ENST00000444688 NPHP4O75161 1426 aaPredicted RBP18.84■□□□□ 0.61
LINC00299-203ENST00000444688 NBPF8Q3BBV2 869 aa18.82■□□□□ 0.6
LINC00299-203ENST00000444688 BCANQ96GW7 911 aa18.82■□□□□ 0.6
LINC00299-203ENST00000444688 C14orf93Q9H972 538 aaKnown RBP18.82■□□□□ 0.6
LINC00299-203ENST00000444688 ADAMTS13Q76LX8 1427 aa18.81■□□□□ 0.6
LINC00299-203ENST00000444688 LAMC1P11047 1609 aa18.81■□□□□ 0.6
LINC00299-203ENST00000444688 NRXN3Q9Y4C0 1643 aa18.8■□□□□ 0.6
LINC00299-203ENST00000444688 DIP2AQ14689 1571 aa18.8■□□□□ 0.6
LINC00299-203ENST00000444688 KIAA1210Q9ULL0 1709 aa18.8■□□□□ 0.6
LINC00299-203ENST00000444688 IQGAP1P46940 1657 aa18.79■□□□□ 0.6
LINC00299-203ENST00000444688 RALGAPBQ86X10 1494 aa18.79■□□□□ 0.6
LINC00299-203ENST00000444688 ALKQ9UM73 1620 aa18.79■□□□□ 0.6
LINC00299-203ENST00000444688 CFAP70Q5T0N1 1121 aa18.79■□□□□ 0.6
LINC00299-203ENST00000444688 TBX22Q9Y458 520 aa18.79■□□□□ 0.6
LINC00299-203ENST00000444688 STRCQ7RTU9 1775 aa18.78■□□□□ 0.6
LINC00299-203ENST00000444688 DMRT2Q9Y5R5 561 aa18.77■□□□□ 0.6
LINC00299-203ENST00000444688 TRPM1Q7Z4N2 1603 aa18.77■□□□□ 0.6
LINC00299-203ENST00000444688 SLC26A8Q96RN1 970 aa18.76■□□□□ 0.59
LINC00299-203ENST00000444688 SENP3Q9H4L4 574 aaPredicted RBP18.75■□□□□ 0.59
LINC00299-203ENST00000444688 ROCK2O75116 1388 aaKnown RBP18.75■□□□□ 0.59
LINC00299-203ENST00000444688 GPRASP1Q5JY77 1395 aa18.75■□□□□ 0.59
LINC00299-203ENST00000444688 PIK3R4Q99570 1358 aa18.75■□□□□ 0.59
LINC00299-203ENST00000444688 SETD1AO15047 1707 aaKnown RBP18.74■□□□□ 0.59
LINC00299-203ENST00000444688 ADGRB1O14514 1584 aa18.73■□□□□ 0.59
LINC00299-203ENST00000444688 METP08581 1390 aa18.72■□□□□ 0.59
LINC00299-203ENST00000444688 NBPF1Q3BBV0 1214 aa18.72■□□□□ 0.59
LINC00299-203ENST00000444688 ASXL1Q8IXJ9 1541 aa18.72■□□□□ 0.59
LINC00299-203ENST00000444688 TMEM132EQ6IEE7 984 aa18.7■□□□□ 0.58
LINC00299-203ENST00000444688 CARD11Q9BXL7 1154 aa18.7■□□□□ 0.58
LINC00299-203ENST00000444688 LRPPRCP42704 1394 aaKnown RBP18.69■□□□□ 0.58
LINC00299-203ENST00000444688 YTHDC2Q9H6S0 1430 aaKnown RBP18.68■□□□□ 0.58
LINC00299-203ENST00000444688 ABCC11Q96J66 1382 aa18.67■□□□□ 0.58
LINC00299-203ENST00000444688 TECPR2O15040 1411 aa18.66■□□□□ 0.58
LINC00299-203ENST00000444688 PTPRUQ92729 1446 aa18.66■□□□□ 0.58
LINC00299-203ENST00000444688 KCNA6P17658 529 aa18.65■□□□□ 0.58
LINC00299-203ENST00000444688 AMOTL2Q9Y2J4 779 aa18.64■□□□□ 0.57
LINC00299-203ENST00000444688 DLC1Q96QB1 1528 aa18.64■□□□□ 0.57
LINC00299-203ENST00000444688 NWD1Q149M9 1564 aa18.64■□□□□ 0.57
LINC00299-203ENST00000444688 SIRT1Q96EB6 747 aa18.63■□□□□ 0.57
LINC00299-203ENST00000444688 STK26Q9P289 416 aa18.63■□□□□ 0.57
LINC00299-203ENST00000444688 EIF3AQ14152 1382 aaKnown RBP18.63■□□□□ 0.57
LINC00299-203ENST00000444688 KNDC1Q76NI1 1749 aa18.63■□□□□ 0.57
LINC00299-203ENST00000444688 XRN1Q8IZH2 1706 aaKnown RBP18.63■□□□□ 0.57
LINC00299-203ENST00000444688 CHD2O14647 1828 aaKnown RBP18.63■□□□□ 0.57
LINC00299-203ENST00000444688 PTCH1Q13635 1447 aa18.62■□□□□ 0.57
LINC00299-203ENST00000444688 CPS1P31327 1500 aa18.61■□□□□ 0.57
LINC00299-203ENST00000444688 USP47Q96K76 1375 aa18.61■□□□□ 0.57
LINC00299-203ENST00000444688 TRAK1Q9UPV9 953 aa18.61■□□□□ 0.57
LINC00299-203ENST00000444688 NKTRP30414 1462 aaKnown RBP18.6■□□□□ 0.57
LINC00299-203ENST00000444688 FAM135BQ49AJ0 1406 aa18.6■□□□□ 0.57
LINC00299-203ENST00000444688 EIF4G2P78344 907 aaKnown RBP eCLIP18.59■□□□□ 0.57
LINC00299-203ENST00000444688 ROBO2Q9HCK4 1378 aa18.57■□□□□ 0.56
LINC00299-203ENST00000444688 ZNF335Q9H4Z2 1342 aaPredicted RBP18.57■□□□□ 0.56
LINC00299-203ENST00000444688 ARHGEF28Q8N1W1 1705 aaKnown RBP18.57■□□□□ 0.56
LINC00299-203ENST00000444688 CENPJQ9HC77 1338 aaPredicted RBP18.56■□□□□ 0.56
LINC00299-203ENST00000444688 PRAM1Q96QH2 718 aa18.56■□□□□ 0.56
LINC00299-203ENST00000444688 POGKQ9P215 609 aa18.55■□□□□ 0.56
LINC00299-203ENST00000444688 HSPA5P11021 654 aaKnown RBP18.54■□□□□ 0.56
LINC00299-203ENST00000444688 STRCP1A6NGW2 1772 aa18.53■□□□□ 0.56
LINC00299-203ENST00000444688 ST20-MTHFSA0A0A6YYL1 179 aa18.53■□□□□ 0.56
LINC00299-203ENST00000444688 WAPLQ7Z5K2 1190 aa18.53■□□□□ 0.56
LINC00299-203ENST00000444688 SBNO2Q9Y2G9 1366 aa18.53■□□□□ 0.56
LINC00299-203ENST00000444688 NCOA3Q9Y6Q9 1424 aa18.52■□□□□ 0.56
LINC00299-203ENST00000444688 SLC24A1O60721 1099 aa18.52■□□□□ 0.56
LINC00299-203ENST00000444688 PROSER2Q86WR7 435 aaPredicted RBP18.52■□□□□ 0.56
LINC00299-203ENST00000444688 PLEKHH1Q9ULM0 1364 aa18.52■□□□□ 0.55
LINC00299-203ENST00000444688 LRRC7Q96NW7 1537 aa18.49■□□□□ 0.55
LINC00299-203ENST00000444688 LTBP4Q8N2S1 1624 aa18.49■□□□□ 0.55
LINC00299-203ENST00000444688 TMEM94Q12767 1356 aa18.49■□□□□ 0.55
LINC00299-203ENST00000444688 QRICH2Q9H0J4 1663 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms