RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 ANKRD30BQ9BXX2 1392 aa20.54■□□□□ 0.88
SSBP3-208ENST00000444533 RPGRIP1LQ68CZ1 1315 aa20.53■□□□□ 0.88
SSBP3-208ENST00000444533 NPHP4O75161 1426 aaPredicted RBP20.53■□□□□ 0.88
SSBP3-208ENST00000444533 LTKP29376 864 aa20.52■□□□□ 0.88
SSBP3-208ENST00000444533 MED14O60244 1454 aa20.51■□□□□ 0.87
SSBP3-208ENST00000444533 MYO5BQ9ULV0 1848 aa20.51■□□□□ 0.87
SSBP3-208ENST00000444533 RGL3Q3MIN7 710 aa20.51■□□□□ 0.87
SSBP3-208ENST00000444533 VGFO15240 615 aaPredicted RBP20.5■□□□□ 0.87
SSBP3-208ENST00000444533 ZFYVE9O95405 1425 aa20.49■□□□□ 0.87
SSBP3-208ENST00000444533 NUTM2DQ5VT03 806 aaPredicted RBP20.48■□□□□ 0.87
SSBP3-208ENST00000444533 IQGAP1P46940 1657 aa20.48■□□□□ 0.87
SSBP3-208ENST00000444533 DHX57Q6P158 1386 aaKnown RBP20.47■□□□□ 0.87
SSBP3-208ENST00000444533 PLEKHG1Q9ULL1 1385 aa20.46■□□□□ 0.87
SSBP3-208ENST00000444533 NEURL4Q96JN8 1562 aa20.46■□□□□ 0.87
SSBP3-208ENST00000444533 SPATA31E1Q6ZUB1 1445 aa20.44■□□□□ 0.86
SSBP3-208ENST00000444533 SENP3Q9H4L4 574 aaPredicted RBP20.42■□□□□ 0.86
SSBP3-208ENST00000444533 STAC3Q96MF2 364 aa20.41■□□□□ 0.86
SSBP3-208ENST00000444533 SLC26A8Q96RN1 970 aa20.41■□□□□ 0.86
SSBP3-208ENST00000444533 NEXMIFQ5QGS0 1516 aa20.41■□□□□ 0.86
SSBP3-208ENST00000444533 NEUROD1Q13562 356 aa20.39■□□□□ 0.85
SSBP3-208ENST00000444533 TBX22Q9Y458 520 aa20.38■□□□□ 0.85
SSBP3-208ENST00000444533 DCAF11Q8TEB1 546 aa20.37■□□□□ 0.85
SSBP3-208ENST00000444533 ZNF335Q9H4Z2 1342 aaPredicted RBP20.36■□□□□ 0.85
SSBP3-208ENST00000444533 DIP2AQ14689 1571 aa20.36■□□□□ 0.85
SSBP3-208ENST00000444533 PPLO60437 1756 aa20.36■□□□□ 0.85
SSBP3-208ENST00000444533 CCER1Q8TC90 406 aaPredicted RBP20.35■□□□□ 0.85
SSBP3-208ENST00000444533 KDM2AQ9Y2K7 1162 aa20.34■□□□□ 0.85
SSBP3-208ENST00000444533 SIN3AQ96ST3 1273 aa20.33■□□□□ 0.85
SSBP3-208ENST00000444533 SETBP1Q9Y6X0 1596 aa20.33■□□□□ 0.84
SSBP3-208ENST00000444533 CLSPNQ9HAW4 1339 aa20.32■□□□□ 0.84
SSBP3-208ENST00000444533 PIK3R4Q99570 1358 aa20.32■□□□□ 0.84
SSBP3-208ENST00000444533 MYOM2P54296 1465 aa20.31■□□□□ 0.84
SSBP3-208ENST00000444533 ADGRF5Q8IZF2 1346 aa20.31■□□□□ 0.84
SSBP3-208ENST00000444533 KCNA6P17658 529 aa20.31■□□□□ 0.84
SSBP3-208ENST00000444533 CPS1P31327 1500 aa20.31■□□□□ 0.84
SSBP3-208ENST00000444533 ADAMTS13Q76LX8 1427 aa20.3■□□□□ 0.84
SSBP3-208ENST00000444533 TONSLQ96HA7 1378 aa20.3■□□□□ 0.84
SSBP3-208ENST00000444533 IFT172Q9UG01 1749 aa20.29■□□□□ 0.84
SSBP3-208ENST00000444533 CERKQ8TCT0 537 aa20.28■□□□□ 0.84
SSBP3-208ENST00000444533 PIK3C2GO75747 1445 aa20.26■□□□□ 0.83
SSBP3-208ENST00000444533 ALKQ9UM73 1620 aa20.25■□□□□ 0.83
SSBP3-208ENST00000444533 PROSER2Q86WR7 435 aaPredicted RBP20.25■□□□□ 0.83
SSBP3-208ENST00000444533 LTBP4Q8N2S1 1624 aa20.24■□□□□ 0.83
SSBP3-208ENST00000444533 L3MBTL2Q969R5 705 aa20.24■□□□□ 0.83
SSBP3-208ENST00000444533 AMOTL2Q9Y2J4 779 aa20.24■□□□□ 0.83
SSBP3-208ENST00000444533 NKTRP30414 1462 aaKnown RBP20.24■□□□□ 0.83
SSBP3-208ENST00000444533 NRXN3Q9Y4C0 1643 aa20.24■□□□□ 0.83
SSBP3-208ENST00000444533 C14orf93Q9H972 538 aaKnown RBP20.22■□□□□ 0.83
SSBP3-208ENST00000444533 LAMC1P11047 1609 aa20.22■□□□□ 0.83
SSBP3-208ENST00000444533 NRXN1Q9ULB1 1477 aa20.22■□□□□ 0.83
SSBP3-208ENST00000444533 METP08581 1390 aa20.21■□□□□ 0.83
SSBP3-208ENST00000444533 C14orf37Q86TY3 774 aa20.21■□□□□ 0.83
SSBP3-208ENST00000444533 IQSEC2Q5JU85 1478 aa20.2■□□□□ 0.82
SSBP3-208ENST00000444533 CFAP70Q5T0N1 1121 aa20.2■□□□□ 0.82
SSBP3-208ENST00000444533 NWD1Q149M9 1564 aa20.2■□□□□ 0.82
SSBP3-208ENST00000444533 CHD2O14647 1828 aaKnown RBP20.2■□□□□ 0.82
SSBP3-208ENST00000444533 TIMELESSQ9UNS1 1208 aa20.17■□□□□ 0.82
SSBP3-208ENST00000444533 LRRC7Q96NW7 1537 aa20.17■□□□□ 0.82
SSBP3-208ENST00000444533 TMEM132EQ6IEE7 984 aa20.16■□□□□ 0.82
SSBP3-208ENST00000444533 STK26Q9P289 416 aa20.16■□□□□ 0.82
SSBP3-208ENST00000444533 TMEM94Q12767 1356 aa20.15■□□□□ 0.82
SSBP3-208ENST00000444533 PRAG1Q86YV5 1406 aa20.15■□□□□ 0.82
SSBP3-208ENST00000444533 PTPRUQ92729 1446 aa20.15■□□□□ 0.82
SSBP3-208ENST00000444533 STRCP1A6NGW2 1772 aa20.15■□□□□ 0.82
SSBP3-208ENST00000444533 NCOA3Q9Y6Q9 1424 aa20.14■□□□□ 0.81
SSBP3-208ENST00000444533 LRPPRCP42704 1394 aaKnown RBP20.14■□□□□ 0.81
SSBP3-208ENST00000444533 MSH6P52701 1360 aa20.14■□□□□ 0.81
SSBP3-208ENST00000444533 TOM1O60784 492 aa20.14■□□□□ 0.81
SSBP3-208ENST00000444533 SETD1AO15047 1707 aaKnown RBP20.13■□□□□ 0.81
SSBP3-208ENST00000444533 YTHDC2Q9H6S0 1430 aaKnown RBP20.12■□□□□ 0.81
SSBP3-208ENST00000444533 PTCH1Q13635 1447 aa20.11■□□□□ 0.81
SSBP3-208ENST00000444533 ABCC11Q96J66 1382 aa20.11■□□□□ 0.81
SSBP3-208ENST00000444533 XRN1Q8IZH2 1706 aaKnown RBP20.11■□□□□ 0.81
SSBP3-208ENST00000444533 UBAP1LF5GYI3 381 aa20.11■□□□□ 0.81
SSBP3-208ENST00000444533 RBM33Q96EV2 1170 aaKnown RBP20.1■□□□□ 0.81
SSBP3-208ENST00000444533 ATF3P18847 181 aa20.09■□□□□ 0.81
SSBP3-208ENST00000444533 POGKQ9P215 609 aa20.09■□□□□ 0.81
SSBP3-208ENST00000444533 KIAA1210Q9ULL0 1709 aa20.09■□□□□ 0.81
SSBP3-208ENST00000444533 FBXO41Q8TF61 875 aa20.08■□□□□ 0.81
SSBP3-208ENST00000444533 C19orf44Q9H6X5 657 aa20.08■□□□□ 0.81
SSBP3-208ENST00000444533 ROCK2O75116 1388 aaKnown RBP20.08■□□□□ 0.8
SSBP3-208ENST00000444533 SIRT1Q96EB6 747 aa20.07■□□□□ 0.8
SSBP3-208ENST00000444533 TRAK1Q9UPV9 953 aa20.07■□□□□ 0.8
SSBP3-208ENST00000444533 TECPR2O15040 1411 aa20.07■□□□□ 0.8
SSBP3-208ENST00000444533 ROBO2Q9HCK4 1378 aa20.07■□□□□ 0.8
SSBP3-208ENST00000444533 SCAF1Q9H7N4 1312 aaKnown RBP20.06■□□□□ 0.8
SSBP3-208ENST00000444533 CADPS2Q86UW7 1296 aa20.06■□□□□ 0.8
SSBP3-208ENST00000444533 ASXL1Q8IXJ9 1541 aa20.05■□□□□ 0.8
SSBP3-208ENST00000444533 FAM135BQ49AJ0 1406 aa20.04■□□□□ 0.8
SSBP3-208ENST00000444533 KNDC1Q76NI1 1749 aa20.04■□□□□ 0.8
SSBP3-208ENST00000444533 ADGRB1O14514 1584 aa20.04■□□□□ 0.8
SSBP3-208ENST00000444533 PRAM1Q96QH2 718 aa20.03■□□□□ 0.8
SSBP3-208ENST00000444533 NBPF1Q3BBV0 1214 aa20.02■□□□□ 0.8
SSBP3-208ENST00000444533 WAPLQ7Z5K2 1190 aa20.02■□□□□ 0.8
SSBP3-208ENST00000444533 DLC1Q96QB1 1528 aa20.02■□□□□ 0.79
SSBP3-208ENST00000444533 ADGRL3Q9HAR2 1447 aa20.02■□□□□ 0.79
SSBP3-208ENST00000444533 PIP4K2BP78356 416 aa20.01■□□□□ 0.79
SSBP3-208ENST00000444533 DCCP43146 1447 aa20.01■□□□□ 0.79
SSBP3-208ENST00000444533 XIRP1Q702N8 1843 aaKnown RBP20■□□□□ 0.79
SSBP3-208ENST00000444533 EIF3AQ14152 1382 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms