RNA–Protein interactions for RNA: ENST00000444523.1

CCDC117-204, Transcript of coiled-coil domain containing 117, humanhuman

TSL 4

Gene CCDC117, Length 463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-204ENST00000444523 SOCS7O14512 581 aa37.3■■■■□ 3.56
CCDC117-204ENST00000444523 ITGAEP38570 1179 aa37.29■■■■□ 3.56
CCDC117-204ENST00000444523 KCNA6P17658 529 aa37.28■■■■□ 3.56
CCDC117-204ENST00000444523 NWD1Q149M9 1564 aa37.25■■■■□ 3.55
CCDC117-204ENST00000444523 RIMS2Q9UQ26 1411 aa37.24■■■■□ 3.55
CCDC117-204ENST00000444523 TMEM94Q12767 1356 aa37.23■■■■□ 3.55
CCDC117-204ENST00000444523 SENP3Q9H4L4 574 aaPredicted RBP37.22■■■■□ 3.55
CCDC117-204ENST00000444523 NUP155O75694 1391 aa37.21■■■■□ 3.55
CCDC117-204ENST00000444523 PLEKHG1Q9ULL1 1385 aa37.19■■■■□ 3.54
CCDC117-204ENST00000444523 RBM33Q96EV2 1170 aaKnown RBP37.19■■■■□ 3.54
CCDC117-204ENST00000444523 CHD2O14647 1828 aaKnown RBP37.17■■■■□ 3.54
CCDC117-204ENST00000444523 PROSER2Q86WR7 435 aaPredicted RBP37.15■■■■□ 3.54
CCDC117-204ENST00000444523 NKTRP30414 1462 aaKnown RBP37.14■■■■□ 3.54
CCDC117-204ENST00000444523 RRBP1Q9P2E9 1410 aaKnown RBP37.12■■■■□ 3.53
CCDC117-204ENST00000444523 CHGAP10645 457 aaKnown RBP37.11■■■■□ 3.53
CCDC117-204ENST00000444523 BCANQ96GW7 911 aa37.11■■■■□ 3.53
CCDC117-204ENST00000444523 NUTM2DQ5VT03 806 aaPredicted RBP37.09■■■■□ 3.53
CCDC117-204ENST00000444523 FAM135BQ49AJ0 1406 aa37.09■■■■□ 3.53
CCDC117-204ENST00000444523 ADAMTS13Q76LX8 1427 aa37.08■■■■□ 3.53
CCDC117-204ENST00000444523 PPP1R15AO75807 674 aaPredicted RBP37.07■■■■□ 3.52
CCDC117-204ENST00000444523 HDGFP51858 240 aaKnown RBP37.05■■■■□ 3.52
CCDC117-204ENST00000444523 TBX22Q9Y458 520 aa37.05■■■■□ 3.52
CCDC117-204ENST00000444523 SPHKAPQ2M3C7 1700 aa37.04■■■■□ 3.52
CCDC117-204ENST00000444523 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.03■■■■□ 3.52
CCDC117-204ENST00000444523 ROBO1Q9Y6N7 1651 aa37.02■■■■□ 3.52
CCDC117-204ENST00000444523 NAIPQ13075 1403 aa36.99■■■■□ 3.51
CCDC117-204ENST00000444523 DIP2AQ14689 1571 aa36.95■■■■□ 3.51
CCDC117-204ENST00000444523 MSH6P52701 1360 aa36.93■■■■□ 3.5
CCDC117-204ENST00000444523 NRXN3Q9Y4C0 1643 aa36.93■■■■□ 3.5
CCDC117-204ENST00000444523 PTPRUQ92729 1446 aa36.91■■■■□ 3.5
CCDC117-204ENST00000444523 CLTCL1P53675 1640 aa36.89■■■■□ 3.5
CCDC117-204ENST00000444523 PIK3R4Q99570 1358 aa36.89■■■■□ 3.5
CCDC117-204ENST00000444523 PHF23Q9BUL5 403 aaPredicted RBP36.87■■■■□ 3.49
CCDC117-204ENST00000444523 SLAIN2Q9P270 581 aa36.87■■■■□ 3.49
CCDC117-204ENST00000444523 NCOA3Q9Y6Q9 1424 aa36.86■■■■□ 3.49
CCDC117-204ENST00000444523 RGS17Q9UGC6 210 aaPredicted RBP36.85■■■■□ 3.49
CCDC117-204ENST00000444523 TRPM2O94759 1503 aa36.85■■■■□ 3.49
CCDC117-204ENST00000444523 SETBP1Q9Y6X0 1596 aa36.83■■■■□ 3.49
CCDC117-204ENST00000444523 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.83■■■■□ 3.49
CCDC117-204ENST00000444523 HFM1A2PYH4 1435 aa36.8■■■■□ 3.48
CCDC117-204ENST00000444523 AMOTL2Q9Y2J4 779 aa36.8■■■■□ 3.48
CCDC117-204ENST00000444523 NEXMIFQ5QGS0 1516 aa36.79■■■■□ 3.48
CCDC117-204ENST00000444523 PHLPP1O60346 1717 aa36.79■■■■□ 3.48
CCDC117-204ENST00000444523 XRN1Q8IZH2 1706 aaKnown RBP36.79■■■■□ 3.48
CCDC117-204ENST00000444523 ZNF326Q5BKZ1 582 aaKnown RBP36.76■■■■□ 3.48
CCDC117-204ENST00000444523 KIF1BO60333 1816 aa36.75■■■■□ 3.47
CCDC117-204ENST00000444523 METP08581 1390 aa36.73■■■■□ 3.47
CCDC117-204ENST00000444523 C19orf44Q9H6X5 657 aa36.72■■■■□ 3.47
CCDC117-204ENST00000444523 COL16A1Q07092 1604 aaPredicted RBP36.71■■■■□ 3.47
CCDC117-204ENST00000444523 C14orf37Q86TY3 774 aa36.7■■■■□ 3.47
CCDC117-204ENST00000444523 TRIM52Q96A61 297 aa36.68■■■■□ 3.46
CCDC117-204ENST00000444523 CADPS2Q86UW7 1296 aa36.66■■■■□ 3.46
CCDC117-204ENST00000444523 ATF3P18847 181 aa36.62■■■■□ 3.45
CCDC117-204ENST00000444523 JCADQ9P266 1359 aa36.62■■■■□ 3.45
CCDC117-204ENST00000444523 SETD1AO15047 1707 aaKnown RBP36.62■■■■□ 3.45
CCDC117-204ENST00000444523 AHDC1Q5TGY3 1603 aaPredicted RBP36.61■■■■□ 3.45
CCDC117-204ENST00000444523 POTEAQ6S8J7 498 aa36.6■■■■□ 3.45
CCDC117-204ENST00000444523 SLC4A1APQ9BWU0 796 aaKnown RBP36.6■■■■□ 3.45
CCDC117-204ENST00000444523 DCCP43146 1447 aa36.57■■■■□ 3.44
CCDC117-204ENST00000444523 BRINP3Q76B58 766 aa36.56■■■■□ 3.44
CCDC117-204ENST00000444523 PPLO60437 1756 aa36.54■■■■□ 3.44
CCDC117-204ENST00000444523 FOXD1Q16676 465 aa36.54■■■■□ 3.44
CCDC117-204ENST00000444523 MST1RQ04912 1400 aa36.53■■■■□ 3.44
CCDC117-204ENST00000444523 NALCNQ8IZF0 1738 aa36.53■■■■□ 3.44
CCDC117-204ENST00000444523 LRP6O75581 1613 aa36.52■■■■□ 3.44
CCDC117-204ENST00000444523 ADGRL3Q9HAR2 1447 aa36.49■■■■□ 3.43
CCDC117-204ENST00000444523 SHPRHQ149N8 1683 aa36.48■■■■□ 3.43
CCDC117-204ENST00000444523 ASXL1Q8IXJ9 1541 aa36.48■■■■□ 3.43
CCDC117-204ENST00000444523 VGFO15240 615 aaPredicted RBP36.47■■■■□ 3.43
CCDC117-204ENST00000444523 RPGRIP1LQ68CZ1 1315 aa36.46■■■■□ 3.43
CCDC117-204ENST00000444523 NHSL1Q5SYE7 1610 aa36.45■■■■□ 3.42
CCDC117-204ENST00000444523 ROBO2Q9HCK4 1378 aa36.42■■■■□ 3.42
CCDC117-204ENST00000444523 SPATA31A6Q5VVP1 1343 aa36.41■■■■□ 3.42
CCDC117-204ENST00000444523 PTCH1Q13635 1447 aa36.41■■■■□ 3.42
CCDC117-204ENST00000444523 PRAG1Q86YV5 1406 aa36.4■■■■□ 3.42
CCDC117-204ENST00000444523 MPHOSPH9Q99550 1183 aa36.38■■■■□ 3.41
CCDC117-204ENST00000444523 SPATA31E1Q6ZUB1 1445 aa36.37■■■■□ 3.41
CCDC117-204ENST00000444523 SETD5Q9C0A6 1442 aa36.35■■■■□ 3.41
CCDC117-204ENST00000444523 IFT172Q9UG01 1749 aa36.35■■■■□ 3.41
CCDC117-204ENST00000444523 DDX17Q92841 729 aaKnown RBP36.35■■■■□ 3.41
CCDC117-204ENST00000444523 ADGRF5Q8IZF2 1346 aa36.34■■■■□ 3.41
CCDC117-204ENST00000444523 C1orf167Q5SNV9 1468 aa36.32■■■■□ 3.41
CCDC117-204ENST00000444523 CCDC144AA2RUR9 1427 aa36.32■■■■□ 3.4
CCDC117-204ENST00000444523 RGL3Q3MIN7 710 aa36.28■■■■□ 3.4
CCDC117-204ENST00000444523 LAMC1P11047 1609 aa36.26■■■■□ 3.4
CCDC117-204ENST00000444523 MEX3CQ5U5Q3 659 aaKnown RBP36.24■■■■□ 3.39
CCDC117-204ENST00000444523 NUTM2BA6NNL0 878 aaPredicted RBP36.22■■■■□ 3.39
CCDC117-204ENST00000444523 NUTM2EB1AL46 878 aaPredicted RBP36.22■■■■□ 3.39
CCDC117-204ENST00000444523 NUTM2AQ8IVF1 878 aaPredicted RBP36.22■■■■□ 3.39
CCDC117-204ENST00000444523 ORAI2Q96SN7 254 aa36.22■■■■□ 3.39
CCDC117-204ENST00000444523 PNPLA6Q8IY17 1366 aa36.21■■■■□ 3.39
CCDC117-204ENST00000444523 LRRC59Q96AG4 307 aaKnown RBP36.21■■■■□ 3.39
CCDC117-204ENST00000444523 ANKRD30BQ9BXX2 1392 aa36.18■■■■□ 3.38
CCDC117-204ENST00000444523 ZNF772Q68DY9 489 aaPredicted RBP36.16■■■■□ 3.38
CCDC117-204ENST00000444523 TECPR2O15040 1411 aa36.16■■■■□ 3.38
CCDC117-204ENST00000444523 PIK3C2GO75747 1445 aa36.16■■■■□ 3.38
CCDC117-204ENST00000444523 SOS2Q07890 1332 aaPredicted RBP36.13■■■■□ 3.37
CCDC117-204ENST00000444523 TMEM132EQ6IEE7 984 aa36.13■■■■□ 3.37
CCDC117-204ENST00000444523 CDC42BPGQ6DT37 1551 aa36.13■■■■□ 3.37
CCDC117-204ENST00000444523 LRPPRCP42704 1394 aaKnown RBP36.13■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms