RNA–Protein interactions for RNA: ENST00000443719.1

LINC01046-201, Transcript of long intergenic non-protein coding RNA 1046, humanhuman

TSL 3 BASIC

Gene LINC01046, Length 405 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01046-201ENST00000443719 SIN3AQ96ST3 1273 aa18.52■□□□□ 0.56
LINC01046-201ENST00000443719 NCKAP5LQ9HCH0 1330 aa18.51■□□□□ 0.55
LINC01046-201ENST00000443719 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.51■□□□□ 0.55
LINC01046-201ENST00000443719 SCAF11Q99590 1463 aaKnown RBP18.49■□□□□ 0.55
LINC01046-201ENST00000443719 POLR1AO95602 1720 aaPredicted RBP18.48■□□□□ 0.55
LINC01046-201ENST00000443719 SLIT1O75093 1534 aa18.48■□□□□ 0.55
LINC01046-201ENST00000443719 RPGRIP1LQ68CZ1 1315 aa18.47■□□□□ 0.55
LINC01046-201ENST00000443719 TONSLQ96HA7 1378 aa18.46■□□□□ 0.55
LINC01046-201ENST00000443719 KDM2AQ9Y2K7 1162 aa18.46■□□□□ 0.55
LINC01046-201ENST00000443719 SPATA31E1Q6ZUB1 1445 aa18.46■□□□□ 0.55
LINC01046-201ENST00000443719 ARHGAP23Q9P227 1491 aa18.46■□□□□ 0.54
LINC01046-201ENST00000443719 LTKP29376 864 aa18.45■□□□□ 0.54
LINC01046-201ENST00000443719 CLSPNQ9HAW4 1339 aa18.45■□□□□ 0.54
LINC01046-201ENST00000443719 VGFO15240 615 aaPredicted RBP18.44■□□□□ 0.54
LINC01046-201ENST00000443719 DMRT2Q9Y5R5 561 aa18.44■□□□□ 0.54
LINC01046-201ENST00000443719 NEXMIFQ5QGS0 1516 aa18.44■□□□□ 0.54
LINC01046-201ENST00000443719 NPHP4O75161 1426 aaPredicted RBP18.43■□□□□ 0.54
LINC01046-201ENST00000443719 ZFYVE9O95405 1425 aa18.43■□□□□ 0.54
LINC01046-201ENST00000443719 DCAF11Q8TEB1 546 aa18.43■□□□□ 0.54
LINC01046-201ENST00000443719 NEURL4Q96JN8 1562 aa18.42■□□□□ 0.54
LINC01046-201ENST00000443719 PPLO60437 1756 aa18.4■□□□□ 0.54
LINC01046-201ENST00000443719 STRCQ7RTU9 1775 aa18.4■□□□□ 0.54
LINC01046-201ENST00000443719 IQGAP1P46940 1657 aa18.4■□□□□ 0.54
LINC01046-201ENST00000443719 PLEKHG1Q9ULL1 1385 aa18.39■□□□□ 0.53
LINC01046-201ENST00000443719 L3MBTL2Q969R5 705 aa18.37■□□□□ 0.53
LINC01046-201ENST00000443719 SLC26A8Q96RN1 970 aa18.37■□□□□ 0.53
LINC01046-201ENST00000443719 ADGRF5Q8IZF2 1346 aa18.36■□□□□ 0.53
LINC01046-201ENST00000443719 IFT172Q9UG01 1749 aa18.36■□□□□ 0.53
LINC01046-201ENST00000443719 MED14O60244 1454 aa18.35■□□□□ 0.53
LINC01046-201ENST00000443719 MYOM2P54296 1465 aa18.34■□□□□ 0.53
LINC01046-201ENST00000443719 STAC3Q96MF2 364 aa18.33■□□□□ 0.52
LINC01046-201ENST00000443719 DIP2AQ14689 1571 aa18.3■□□□□ 0.52
LINC01046-201ENST00000443719 SETBP1Q9Y6X0 1596 aa18.3■□□□□ 0.52
LINC01046-201ENST00000443719 PIK3C2GO75747 1445 aa18.29■□□□□ 0.52
LINC01046-201ENST00000443719 ADAMTS13Q76LX8 1427 aa18.27■□□□□ 0.52
LINC01046-201ENST00000443719 CFAP70Q5T0N1 1121 aa18.27■□□□□ 0.52
LINC01046-201ENST00000443719 TBX22Q9Y458 520 aa18.27■□□□□ 0.52
LINC01046-201ENST00000443719 ALKQ9UM73 1620 aa18.27■□□□□ 0.51
LINC01046-201ENST00000443719 NRXN3Q9Y4C0 1643 aa18.26■□□□□ 0.51
LINC01046-201ENST00000443719 ZNF335Q9H4Z2 1342 aaPredicted RBP18.25■□□□□ 0.51
LINC01046-201ENST00000443719 PRAG1Q86YV5 1406 aa18.25■□□□□ 0.51
LINC01046-201ENST00000443719 LAMC1P11047 1609 aa18.25■□□□□ 0.51
LINC01046-201ENST00000443719 TIMELESSQ9UNS1 1208 aa18.25■□□□□ 0.51
LINC01046-201ENST00000443719 NRXN1Q9ULB1 1477 aa18.25■□□□□ 0.51
LINC01046-201ENST00000443719 STK26Q9P289 416 aa18.24■□□□□ 0.51
LINC01046-201ENST00000443719 TMEM132EQ6IEE7 984 aa18.23■□□□□ 0.51
LINC01046-201ENST00000443719 C14orf93Q9H972 538 aaKnown RBP18.23■□□□□ 0.51
LINC01046-201ENST00000443719 METP08581 1390 aa18.22■□□□□ 0.51
LINC01046-201ENST00000443719 PIK3R4Q99570 1358 aa18.21■□□□□ 0.51
LINC01046-201ENST00000443719 AMOTL2Q9Y2J4 779 aa18.21■□□□□ 0.51
LINC01046-201ENST00000443719 ROCK2O75116 1388 aaKnown RBP18.2■□□□□ 0.5
LINC01046-201ENST00000443719 KCNA6P17658 529 aa18.2■□□□□ 0.5
LINC01046-201ENST00000443719 C14orf37Q86TY3 774 aa18.19■□□□□ 0.5
LINC01046-201ENST00000443719 NBPF8Q3BBV2 869 aa18.18■□□□□ 0.5
LINC01046-201ENST00000443719 PROSER2Q86WR7 435 aaPredicted RBP18.18■□□□□ 0.5
LINC01046-201ENST00000443719 SETD1AO15047 1707 aaKnown RBP18.18■□□□□ 0.5
LINC01046-201ENST00000443719 KIAA1210Q9ULL0 1709 aa18.17■□□□□ 0.5
LINC01046-201ENST00000443719 YTHDC2Q9H6S0 1430 aaKnown RBP18.16■□□□□ 0.5
LINC01046-201ENST00000443719 TRAK1Q9UPV9 953 aa18.16■□□□□ 0.5
LINC01046-201ENST00000443719 CPS1P31327 1500 aa18.16■□□□□ 0.5
LINC01046-201ENST00000443719 CHD2O14647 1828 aaKnown RBP18.16■□□□□ 0.5
LINC01046-201ENST00000443719 TRPM1Q7Z4N2 1603 aa18.16■□□□□ 0.5
LINC01046-201ENST00000443719 PTPRUQ92729 1446 aa18.15■□□□□ 0.5
LINC01046-201ENST00000443719 ASXL1Q8IXJ9 1541 aa18.15■□□□□ 0.5
LINC01046-201ENST00000443719 NBPF1Q3BBV0 1214 aa18.15■□□□□ 0.5
LINC01046-201ENST00000443719 CARD11Q9BXL7 1154 aa18.15■□□□□ 0.5
LINC01046-201ENST00000443719 NWD1Q149M9 1564 aa18.15■□□□□ 0.5
LINC01046-201ENST00000443719 LRPPRCP42704 1394 aaKnown RBP18.15■□□□□ 0.5
LINC01046-201ENST00000443719 NKTRP30414 1462 aaKnown RBP18.14■□□□□ 0.5
LINC01046-201ENST00000443719 POGKQ9P215 609 aa18.14■□□□□ 0.49
LINC01046-201ENST00000443719 RBM33Q96EV2 1170 aaKnown RBP18.13■□□□□ 0.49
LINC01046-201ENST00000443719 RALGAPBQ86X10 1494 aa18.13■□□□□ 0.49
LINC01046-201ENST00000443719 XRN1Q8IZH2 1706 aaKnown RBP18.12■□□□□ 0.49
LINC01046-201ENST00000443719 STRCP1A6NGW2 1772 aa18.12■□□□□ 0.49
LINC01046-201ENST00000443719 SAFB2Q14151 953 aaKnown RBP eCLIP18.11■□□□□ 0.49
LINC01046-201ENST00000443719 ADGRB1O14514 1584 aa18.11■□□□□ 0.49
LINC01046-201ENST00000443719 EIF3AQ14152 1382 aaKnown RBP18.1■□□□□ 0.49
LINC01046-201ENST00000443719 PTCH1Q13635 1447 aa18.09■□□□□ 0.49
LINC01046-201ENST00000443719 TMEM94Q12767 1356 aa18.09■□□□□ 0.49
LINC01046-201ENST00000443719 ABCC11Q96J66 1382 aa18.09■□□□□ 0.49
LINC01046-201ENST00000443719 ROBO2Q9HCK4 1378 aa18.09■□□□□ 0.49
LINC01046-201ENST00000443719 ZEB1P37275 1124 aaPredicted RBP18.09■□□□□ 0.49
LINC01046-201ENST00000443719 PRAM1Q96QH2 718 aa18.09■□□□□ 0.49
LINC01046-201ENST00000443719 KNDC1Q76NI1 1749 aa18.09■□□□□ 0.49
LINC01046-201ENST00000443719 LTBP4Q8N2S1 1624 aa18.09■□□□□ 0.49
LINC01046-201ENST00000443719 LRRC7Q96NW7 1537 aa18.08■□□□□ 0.48
LINC01046-201ENST00000443719 WAPLQ7Z5K2 1190 aa18.07■□□□□ 0.48
LINC01046-201ENST00000443719 MSH6P52701 1360 aa18.06■□□□□ 0.48
LINC01046-201ENST00000443719 CERKQ8TCT0 537 aa18.06■□□□□ 0.48
LINC01046-201ENST00000443719 TECPR2O15040 1411 aa18.06■□□□□ 0.48
LINC01046-201ENST00000443719 DLC1Q96QB1 1528 aa18.04■□□□□ 0.48
LINC01046-201ENST00000443719 GPRASP1Q5JY77 1395 aa18.04■□□□□ 0.48
LINC01046-201ENST00000443719 PLEKHH1Q9ULM0 1364 aa18.04■□□□□ 0.48
LINC01046-201ENST00000443719 CENPJQ9HC77 1338 aaPredicted RBP18.03■□□□□ 0.48
LINC01046-201ENST00000443719 FAM135BQ49AJ0 1406 aa18.03■□□□□ 0.48
LINC01046-201ENST00000443719 ARHGEF28Q8N1W1 1705 aaKnown RBP18.03■□□□□ 0.48
LINC01046-201ENST00000443719 MINK1Q8N4C8 1332 aaPredicted RBP18.02■□□□□ 0.48
LINC01046-201ENST00000443719 ATF3P18847 181 aa18.02■□□□□ 0.48
LINC01046-201ENST00000443719 SIRT1Q96EB6 747 aa18.01■□□□□ 0.47
LINC01046-201ENST00000443719 HIRIP3Q9BW71 556 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms