RNA–Protein interactions for RNA: ENST00000442929.1

FAM3A-214, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-214ENST00000442929 MED14O60244 1454 aa27.91■■■□□ 2.06
FAM3A-214ENST00000442929 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.89■■■□□ 2.06
FAM3A-214ENST00000442929 RIMS2Q9UQ26 1411 aa27.89■■■□□ 2.06
FAM3A-214ENST00000442929 ANKRD30BQ9BXX2 1392 aa27.88■■■□□ 2.05
FAM3A-214ENST00000442929 NCKAP5LQ9HCH0 1330 aa27.88■■■□□ 2.05
FAM3A-214ENST00000442929 ZFYVE9O95405 1425 aa27.87■■■□□ 2.05
FAM3A-214ENST00000442929 ZNF326Q5BKZ1 582 aaKnown RBP27.87■■■□□ 2.05
FAM3A-214ENST00000442929 PPLO60437 1756 aa27.86■■■□□ 2.05
FAM3A-214ENST00000442929 NPHP4O75161 1426 aaPredicted RBP27.86■■■□□ 2.05
FAM3A-214ENST00000442929 TXNDC2Q86VQ3 553 aa27.86■■■□□ 2.05
FAM3A-214ENST00000442929 PPP1R15AO75807 674 aaPredicted RBP27.85■■■□□ 2.05
FAM3A-214ENST00000442929 CERKQ8TCT0 537 aa27.85■■■□□ 2.05
FAM3A-214ENST00000442929 DISP3Q9P2K9 1392 aa27.85■■■□□ 2.05
FAM3A-214ENST00000442929 NEXMIFQ5QGS0 1516 aa27.83■■■□□ 2.05
FAM3A-214ENST00000442929 IFT172Q9UG01 1749 aa27.83■■■□□ 2.05
FAM3A-214ENST00000442929 RPGRIP1LQ68CZ1 1315 aa27.81■■■□□ 2.04
FAM3A-214ENST00000442929 DHX57Q6P158 1386 aaKnown RBP27.81■■■□□ 2.04
FAM3A-214ENST00000442929 SPATA31E1Q6ZUB1 1445 aa27.79■■■□□ 2.04
FAM3A-214ENST00000442929 DIP2AQ14689 1571 aa27.78■■■□□ 2.04
FAM3A-214ENST00000442929 PLEKHG1Q9ULL1 1385 aa27.78■■■□□ 2.04
FAM3A-214ENST00000442929 LTKP29376 864 aa27.78■■■□□ 2.04
FAM3A-214ENST00000442929 BCANQ96GW7 911 aa27.73■■■□□ 2.03
FAM3A-214ENST00000442929 VGFO15240 615 aaPredicted RBP27.72■■■□□ 2.03
FAM3A-214ENST00000442929 SETBP1Q9Y6X0 1596 aa27.72■■■□□ 2.03
FAM3A-214ENST00000442929 RGL3Q3MIN7 710 aa27.69■■■□□ 2.02
FAM3A-214ENST00000442929 MYOM2P54296 1465 aa27.67■■■□□ 2.02
FAM3A-214ENST00000442929 NRXN3Q9Y4C0 1643 aa27.66■■■□□ 2.02
FAM3A-214ENST00000442929 NUTM2DQ5VT03 806 aaPredicted RBP27.65■■■□□ 2.02
FAM3A-214ENST00000442929 LAMC1P11047 1609 aa27.65■■■□□ 2.02
FAM3A-214ENST00000442929 CPS1P31327 1500 aa27.63■■■□□ 2.01
FAM3A-214ENST00000442929 STAC3Q96MF2 364 aa27.63■■■□□ 2.01
FAM3A-214ENST00000442929 CHD2O14647 1828 aaKnown RBP27.62■■■□□ 2.01
FAM3A-214ENST00000442929 TBX22Q9Y458 520 aa27.59■■■□□ 2.01
FAM3A-214ENST00000442929 NWD1Q149M9 1564 aa27.59■■■□□ 2.01
FAM3A-214ENST00000442929 CLSPNQ9HAW4 1339 aa27.59■■■□□ 2.01
FAM3A-214ENST00000442929 PIK3R4Q99570 1358 aa27.59■■■□□ 2.01
FAM3A-214ENST00000442929 ADAMTS13Q76LX8 1427 aa27.58■■■□□ 2.01
FAM3A-214ENST00000442929 SETD1AO15047 1707 aaKnown RBP27.58■■■□□ 2.01
FAM3A-214ENST00000442929 SLC26A8Q96RN1 970 aa27.58■■■□□ 2.01
FAM3A-214ENST00000442929 LTBP4Q8N2S1 1624 aa27.57■■■□□ 2
FAM3A-214ENST00000442929 ZNF335Q9H4Z2 1342 aaPredicted RBP27.56■■■□□ 2
FAM3A-214ENST00000442929 NRXN1Q9ULB1 1477 aa27.56■■■□□ 2
FAM3A-214ENST00000442929 ALKQ9UM73 1620 aa27.56■■■□□ 2
FAM3A-214ENST00000442929 STRCP1A6NGW2 1772 aa27.55■■■□□ 2
FAM3A-214ENST00000442929 PIK3C2GO75747 1445 aa27.55■■■□□ 2
FAM3A-214ENST00000442929 NKTRP30414 1462 aaKnown RBP27.54■■■□□ 2
FAM3A-214ENST00000442929 DCAF11Q8TEB1 546 aa27.53■■■□□ 2
FAM3A-214ENST00000442929 NEUROD1Q13562 356 aa27.51■■□□□ 1.99
FAM3A-214ENST00000442929 SENP3Q9H4L4 574 aaPredicted RBP27.51■■□□□ 1.99
FAM3A-214ENST00000442929 IQSEC2Q5JU85 1478 aa27.51■■□□□ 1.99
FAM3A-214ENST00000442929 ADGRF5Q8IZF2 1346 aa27.5■■□□□ 1.99
FAM3A-214ENST00000442929 SIN3AQ96ST3 1273 aa27.5■■□□□ 1.99
FAM3A-214ENST00000442929 XRN1Q8IZH2 1706 aaKnown RBP27.5■■□□□ 1.99
FAM3A-214ENST00000442929 KIAA1210Q9ULL0 1709 aa27.49■■□□□ 1.99
FAM3A-214ENST00000442929 TONSLQ96HA7 1378 aa27.48■■□□□ 1.99
FAM3A-214ENST00000442929 KCNA6P17658 529 aa27.48■■□□□ 1.99
FAM3A-214ENST00000442929 CCER1Q8TC90 406 aaPredicted RBP27.48■■□□□ 1.99
FAM3A-214ENST00000442929 KDM2AQ9Y2K7 1162 aa27.46■■□□□ 1.99
FAM3A-214ENST00000442929 KNDC1Q76NI1 1749 aa27.44■■□□□ 1.98
FAM3A-214ENST00000442929 METP08581 1390 aa27.41■■□□□ 1.98
FAM3A-214ENST00000442929 LRRC7Q96NW7 1537 aa27.41■■□□□ 1.98
FAM3A-214ENST00000442929 XIRP1Q702N8 1843 aaKnown RBP27.4■■□□□ 1.98
FAM3A-214ENST00000442929 L3MBTL2Q969R5 705 aa27.39■■□□□ 1.98
FAM3A-214ENST00000442929 PRAG1Q86YV5 1406 aa27.39■■□□□ 1.97
FAM3A-214ENST00000442929 C14orf93Q9H972 538 aaKnown RBP27.38■■□□□ 1.97
FAM3A-214ENST00000442929 AMOTL2Q9Y2J4 779 aa27.37■■□□□ 1.97
FAM3A-214ENST00000442929 ASXL1Q8IXJ9 1541 aa27.36■■□□□ 1.97
FAM3A-214ENST00000442929 PTCH1Q13635 1447 aa27.36■■□□□ 1.97
FAM3A-214ENST00000442929 PTPRUQ92729 1446 aa27.36■■□□□ 1.97
FAM3A-214ENST00000442929 TRPM1Q7Z4N2 1603 aa27.34■■□□□ 1.97
FAM3A-214ENST00000442929 NCOA3Q9Y6Q9 1424 aa27.34■■□□□ 1.97
FAM3A-214ENST00000442929 PROSER2Q86WR7 435 aaPredicted RBP27.34■■□□□ 1.97
FAM3A-214ENST00000442929 TIMELESSQ9UNS1 1208 aa27.33■■□□□ 1.97
FAM3A-214ENST00000442929 CFAP70Q5T0N1 1121 aa27.32■■□□□ 1.96
FAM3A-214ENST00000442929 LRPPRCP42704 1394 aaKnown RBP27.32■■□□□ 1.96
FAM3A-214ENST00000442929 TECPR2O15040 1411 aa27.32■■□□□ 1.96
FAM3A-214ENST00000442929 YTHDC2Q9H6S0 1430 aaKnown RBP27.32■■□□□ 1.96
FAM3A-214ENST00000442929 ADGRB1O14514 1584 aa27.31■■□□□ 1.96
FAM3A-214ENST00000442929 TMEM94Q12767 1356 aa27.3■■□□□ 1.96
FAM3A-214ENST00000442929 DLC1Q96QB1 1528 aa27.27■■□□□ 1.96
FAM3A-214ENST00000442929 MSH6P52701 1360 aa27.27■■□□□ 1.96
FAM3A-214ENST00000442929 ABCC11Q96J66 1382 aa27.27■■□□□ 1.96
FAM3A-214ENST00000442929 NALCNQ8IZF0 1738 aa27.25■■□□□ 1.95
FAM3A-214ENST00000442929 TMEM132EQ6IEE7 984 aa27.25■■□□□ 1.95
FAM3A-214ENST00000442929 C14orf37Q86TY3 774 aa27.25■■□□□ 1.95
FAM3A-214ENST00000442929 ARHGEF28Q8N1W1 1705 aaKnown RBP27.24■■□□□ 1.95
FAM3A-214ENST00000442929 FAM135BQ49AJ0 1406 aa27.24■■□□□ 1.95
FAM3A-214ENST00000442929 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.23■■□□□ 1.95
FAM3A-214ENST00000442929 STK26Q9P289 416 aa27.22■■□□□ 1.95
FAM3A-214ENST00000442929 DCCP43146 1447 aa27.21■■□□□ 1.95
FAM3A-214ENST00000442929 ROBO2Q9HCK4 1378 aa27.21■■□□□ 1.95
FAM3A-214ENST00000442929 ADGRL3Q9HAR2 1447 aa27.2■■□□□ 1.94
FAM3A-214ENST00000442929 RALGAPBQ86X10 1494 aa27.19■■□□□ 1.94
FAM3A-214ENST00000442929 TOM1O60784 492 aa27.19■■□□□ 1.94
FAM3A-214ENST00000442929 SIRT1Q96EB6 747 aa27.19■■□□□ 1.94
FAM3A-214ENST00000442929 ROCK2O75116 1388 aaKnown RBP27.19■■□□□ 1.94
FAM3A-214ENST00000442929 C19orf44Q9H6X5 657 aa27.16■■□□□ 1.94
FAM3A-214ENST00000442929 CDC42BPGQ6DT37 1551 aa27.15■■□□□ 1.94
FAM3A-214ENST00000442929 UBAP1LF5GYI3 381 aa27.15■■□□□ 1.94
FAM3A-214ENST00000442929 ATF3P18847 181 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms