RNA–Protein interactions for RNA: ENST00000442738.6

POLR2F-205, Transcript of RNA polymerase II subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2F, Length 2,106 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-205ENST00000442738 CD109Q6YHK3 1445 aa28.24■■■□□ 2.11
POLR2F-205ENST00000442738 IFT172Q9UG01 1749 aa28.23■■■□□ 2.11
POLR2F-205ENST00000442738 MYT1Q01538 1121 aa28.22■■■□□ 2.11
POLR2F-205ENST00000442738 HECW2Q9P2P5 1572 aa28.2■■■□□ 2.1
POLR2F-205ENST00000442738 SLC24A1O60721 1099 aa28.2■■■□□ 2.1
POLR2F-205ENST00000442738 NRXN1Q9ULB1 1477 aa28.18■■■□□ 2.1
POLR2F-205ENST00000442738 RBM19Q9Y4C8 960 aaKnown RBP28.18■■■□□ 2.1
POLR2F-205ENST00000442738 FRMPD1Q5SYB0 1578 aa28.17■■■□□ 2.1
POLR2F-205ENST00000442738 ABCA6Q8N139 1617 aa28.17■■■□□ 2.1
POLR2F-205ENST00000442738 UGGT1Q9NYU2 1555 aa28.16■■■□□ 2.1
POLR2F-205ENST00000442738 PDE3BQ13370 1112 aa28.16■■■□□ 2.1
POLR2F-205ENST00000442738 NEO1Q92859 1461 aa28.15■■■□□ 2.1
POLR2F-205ENST00000442738 ADGRB3O60242 1522 aa28.15■■■□□ 2.1
POLR2F-205ENST00000442738 BLMP54132 1417 aaPredicted RBP28.15■■■□□ 2.1
POLR2F-205ENST00000442738 CC2D1BQ5T0F9 858 aaKnown RBP28.13■■■□□ 2.09
POLR2F-205ENST00000442738 MROH2AA6NES4 1674 aa28.13■■■□□ 2.09
POLR2F-205ENST00000442738 MYOM1P52179 1685 aa28.12■■■□□ 2.09
POLR2F-205ENST00000442738 KDM5AP29375 1690 aaKnown RBP28.12■■■□□ 2.09
POLR2F-205ENST00000442738 NPC1L1Q9UHC9 1359 aa28.11■■■□□ 2.09
POLR2F-205ENST00000442738 MYO3AQ8NEV4 1616 aa28.1■■■□□ 2.09
POLR2F-205ENST00000442738 SETBP1Q9Y6X0 1596 aa28.09■■■□□ 2.09
POLR2F-205ENST00000442738 KNSTRNQ9Y448 316 aa28.09■■■□□ 2.09
POLR2F-205ENST00000442738 NPATQ14207 1427 aa28.08■■■□□ 2.09
POLR2F-205ENST00000442738 ASXL1Q8IXJ9 1541 aa28.07■■■□□ 2.08
POLR2F-205ENST00000442738 SBNO2Q9Y2G9 1366 aa28.06■■■□□ 2.08
POLR2F-205ENST00000442738 AMER1Q5JTC6 1135 aaPredicted RBP28.06■■■□□ 2.08
POLR2F-205ENST00000442738 ADGRF5Q8IZF2 1346 aa28.05■■■□□ 2.08
POLR2F-205ENST00000442738 ABCC3O15438 1527 aa28.04■■■□□ 2.08
POLR2F-205ENST00000442738 B4GALNT3Q6L9W6 998 aa28.04■■■□□ 2.08
POLR2F-205ENST00000442738 PPLO60437 1756 aa28.03■■■□□ 2.08
POLR2F-205ENST00000442738 CFAP70Q5T0N1 1121 aa28.03■■■□□ 2.08
POLR2F-205ENST00000442738 ERVK-7P63135 1459 aa28.02■■■□□ 2.08
POLR2F-205ENST00000442738 PIK3C2GO75747 1445 aa28.01■■■□□ 2.07
POLR2F-205ENST00000442738 RPGRIP1LQ68CZ1 1315 aa27.99■■■□□ 2.07
POLR2F-205ENST00000442738 CAMSAP1Q5T5Y3 1602 aa27.99■■■□□ 2.07
POLR2F-205ENST00000442738 NOS1P29475 1434 aa27.99■■■□□ 2.07
POLR2F-205ENST00000442738 PPP2R1AP30153 589 aa27.98■■■□□ 2.07
POLR2F-205ENST00000442738 DIP2CQ9Y2E4 1556 aa27.97■■■□□ 2.07
POLR2F-205ENST00000442738 RICTORQ6R327 1708 aa27.94■■■□□ 2.06
POLR2F-205ENST00000442738 RCAN3Q9UKA8 241 aa27.94■■■□□ 2.06
POLR2F-205ENST00000442738 ZC3H13Q5T200 1668 aaKnown RBP27.94■■■□□ 2.06
POLR2F-205ENST00000442738 PIK3C2BO00750 1634 aa27.94■■■□□ 2.06
POLR2F-205ENST00000442738 RRP1P56182 461 aaKnown RBP27.94■■■□□ 2.06
POLR2F-205ENST00000442738 SENP3-EIF4A1A0A087X0R7 540 aa27.93■■■□□ 2.06
POLR2F-205ENST00000442738 GGT6Q6P531 493 aa27.93■■■□□ 2.06
POLR2F-205ENST00000442738 FANCIQ9NVI1 1328 aa27.93■■■□□ 2.06
POLR2F-205ENST00000442738 ARHGAP31Q2M1Z3 1444 aa27.92■■■□□ 2.06
POLR2F-205ENST00000442738 ADGRB1O14514 1584 aa27.91■■■□□ 2.06
POLR2F-205ENST00000442738 C14orf93Q9H972 538 aaKnown RBP27.91■■■□□ 2.06
POLR2F-205ENST00000442738 GLI2P10070 1586 aa27.89■■■□□ 2.06
POLR2F-205ENST00000442738 CCDC136Q96JN2 1154 aa27.89■■■□□ 2.06
POLR2F-205ENST00000442738 SIGLEC1Q9BZZ2 1709 aa27.89■■■□□ 2.05
POLR2F-205ENST00000442738 CFAP65Q6ZU64 1925 aaKnown RBP27.88■■■□□ 2.05
POLR2F-205ENST00000442738 CENPJQ9HC77 1338 aaPredicted RBP27.87■■■□□ 2.05
POLR2F-205ENST00000442738 ADAMTS8Q9UP79 889 aa27.87■■■□□ 2.05
POLR2F-205ENST00000442738 WDR43Q15061 677 aaKnown RBP eCLIP27.86■■■□□ 2.05
POLR2F-205ENST00000442738 RAPGEF3O95398 923 aa27.85■■■□□ 2.05
POLR2F-205ENST00000442738 CHGAP10645 457 aaKnown RBP27.84■■■□□ 2.05
POLR2F-205ENST00000442738 SALL2Q9Y467 1007 aaPredicted RBP27.84■■■□□ 2.05
POLR2F-205ENST00000442738 QRICH2Q9H0J4 1663 aa27.84■■■□□ 2.05
POLR2F-205ENST00000442738 CDCA7LQ96GN5 454 aa27.82■■■□□ 2.04
POLR2F-205ENST00000442738 ANP32EQ9BTT0 268 aa27.82■■■□□ 2.04
POLR2F-205ENST00000442738 NEXMIFQ5QGS0 1516 aa27.81■■■□□ 2.04
POLR2F-205ENST00000442738 ZFYVE9O95405 1425 aa27.78■■■□□ 2.04
POLR2F-205ENST00000442738 PUS7Q96PZ0 661 aaKnown RBP27.77■■■□□ 2.04
POLR2F-205ENST00000442738 CARD14Q9BXL6 1004 aa27.77■■■□□ 2.04
POLR2F-205ENST00000442738 ZNF521Q96K83 1311 aa27.77■■■□□ 2.04
POLR2F-205ENST00000442738 VGFO15240 615 aaPredicted RBP27.76■■■□□ 2.03
POLR2F-205ENST00000442738 USP32Q8NFA0 1604 aa27.75■■■□□ 2.03
POLR2F-205ENST00000442738 SLC52A1Q9NWF4 448 aa27.74■■■□□ 2.03
POLR2F-205ENST00000442738 PLEKHH1Q9ULM0 1364 aa27.73■■■□□ 2.03
POLR2F-205ENST00000442738 TRAK1Q9UPV9 953 aa27.73■■■□□ 2.03
POLR2F-205ENST00000442738 YEATS2Q9ULM3 1422 aa27.73■■■□□ 2.03
POLR2F-205ENST00000442738 NGEFQ8N5V2 710 aa27.72■■■□□ 2.03
POLR2F-205ENST00000442738 ARHGEF28Q8N1W1 1705 aaKnown RBP27.72■■■□□ 2.03
POLR2F-205ENST00000442738 EXOC6Q8TAG9 804 aa27.7■■■□□ 2.03
POLR2F-205ENST00000442738 POLR3AO14802 1390 aaPredicted RBP27.7■■■□□ 2.03
POLR2F-205ENST00000442738 PREX1Q8TCU6 1659 aa27.69■■■□□ 2.02
POLR2F-205ENST00000442738 NSD3Q9BZ95 1437 aa27.67■■■□□ 2.02
POLR2F-205ENST00000442738 GOLGA2Q08379 1002 aa27.67■■■□□ 2.02
POLR2F-205ENST00000442738 DUSP27Q5VZP5 1158 aa27.67■■■□□ 2.02
POLR2F-205ENST00000442738 REREQ9P2R6 1566 aa27.65■■■□□ 2.02
POLR2F-205ENST00000442738 IDI1Q13907 227 aa27.65■■■□□ 2.02
POLR2F-205ENST00000442738 TMEM132EQ6IEE7 984 aa27.65■■■□□ 2.02
POLR2F-205ENST00000442738 TMEM131LA2VDJ0 1609 aa27.64■■■□□ 2.02
POLR2F-205ENST00000442738 DIP2BQ9P265 1576 aa27.63■■■□□ 2.01
POLR2F-205ENST00000442738 EVC2Q86UK5 1308 aa27.63■■■□□ 2.01
POLR2F-205ENST00000442738 MSH5O43196 834 aa27.62■■■□□ 2.01
POLR2F-205ENST00000442738 TULP4Q9NRJ4 1543 aa27.62■■■□□ 2.01
POLR2F-205ENST00000442738 TRMT2AQ8IZ69 625 aaKnown RBP27.61■■■□□ 2.01
POLR2F-205ENST00000442738 SLFN5Q08AF3 891 aa27.6■■■□□ 2.01
POLR2F-205ENST00000442738 MYO5BQ9ULV0 1848 aa27.59■■■□□ 2.01
POLR2F-205ENST00000442738 SLC12A5Q9H2X9 1139 aa27.59■■■□□ 2.01
POLR2F-205ENST00000442738 RIMBP3CA6NJZ7 1639 aa27.59■■■□□ 2.01
POLR2F-205ENST00000442738 RIMBP3BA6NNM3 1639 aa27.59■■■□□ 2.01
POLR2F-205ENST00000442738 RIMBP3Q9UFD9 1639 aa27.59■■■□□ 2.01
POLR2F-205ENST00000442738 AGLP35573 1532 aa27.59■■■□□ 2.01
POLR2F-205ENST00000442738 NSD2O96028 1365 aa27.58■■■□□ 2.01
POLR2F-205ENST00000442738 NINLQ9Y2I6 1382 aa27.58■■■□□ 2.01
POLR2F-205ENST00000442738 CYB5RLQ6IPT4 315 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms