RNA–Protein interactions for RNA: ENST00000442667.2

CDCA4P1-201, Transcript of cell division cycle associated 4 pseudogene 1, humanhuman

BASIC

Gene CDCA4P1, Length 624 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P1-201ENST00000442667 ZFYVE9O95405 1425 aa14.8□□□□□ -0.04
CDCA4P1-201ENST00000442667 SLIT1O75093 1534 aa14.8□□□□□ -0.04
CDCA4P1-201ENST00000442667 ZNF142P52746 1687 aaPredicted RBP14.8□□□□□ -0.04
CDCA4P1-201ENST00000442667 PPP1R15AO75807 674 aaPredicted RBP14.78□□□□□ -0.04
CDCA4P1-201ENST00000442667 UBR1Q8IWV7 1749 aa14.78□□□□□ -0.04
CDCA4P1-201ENST00000442667 SCAF11Q99590 1463 aaKnown RBP14.77□□□□□ -0.04
CDCA4P1-201ENST00000442667 VGFO15240 615 aaPredicted RBP14.77□□□□□ -0.05
CDCA4P1-201ENST00000442667 DCAF11Q8TEB1 546 aa14.76□□□□□ -0.05
CDCA4P1-201ENST00000442667 L3MBTL2Q969R5 705 aa14.76□□□□□ -0.05
CDCA4P1-201ENST00000442667 DMRT2Q9Y5R5 561 aa14.76□□□□□ -0.05
CDCA4P1-201ENST00000442667 KDM5AP29375 1690 aaKnown RBP14.75□□□□□ -0.05
CDCA4P1-201ENST00000442667 SENP3Q9H4L4 574 aaPredicted RBP14.75□□□□□ -0.05
CDCA4P1-201ENST00000442667 ADGRF5Q8IZF2 1346 aa14.74□□□□□ -0.05
CDCA4P1-201ENST00000442667 NEURL4Q96JN8 1562 aa14.74□□□□□ -0.05
CDCA4P1-201ENST00000442667 BCANQ96GW7 911 aa14.74□□□□□ -0.05
CDCA4P1-201ENST00000442667 KDM2AQ9Y2K7 1162 aa14.74□□□□□ -0.05
CDCA4P1-201ENST00000442667 NPHP4O75161 1426 aaPredicted RBP14.74□□□□□ -0.05
CDCA4P1-201ENST00000442667 PLEKHG1Q9ULL1 1385 aa14.73□□□□□ -0.05
CDCA4P1-201ENST00000442667 STAC3Q96MF2 364 aa14.73□□□□□ -0.05
CDCA4P1-201ENST00000442667 MED14O60244 1454 aa14.73□□□□□ -0.05
CDCA4P1-201ENST00000442667 NEXMIFQ5QGS0 1516 aa14.72□□□□□ -0.05
CDCA4P1-201ENST00000442667 SLC26A8Q96RN1 970 aa14.72□□□□□ -0.05
CDCA4P1-201ENST00000442667 TBX22Q9Y458 520 aa14.7□□□□□ -0.06
CDCA4P1-201ENST00000442667 TONSLQ96HA7 1378 aa14.69□□□□□ -0.06
CDCA4P1-201ENST00000442667 KIF1BO60333 1816 aa14.69□□□□□ -0.06
CDCA4P1-201ENST00000442667 ADAMTS13Q76LX8 1427 aa14.68□□□□□ -0.06
CDCA4P1-201ENST00000442667 TIMELESSQ9UNS1 1208 aa14.68□□□□□ -0.06
CDCA4P1-201ENST00000442667 STRCQ7RTU9 1775 aa14.68□□□□□ -0.06
CDCA4P1-201ENST00000442667 C14orf93Q9H972 538 aaKnown RBP14.67□□□□□ -0.06
CDCA4P1-201ENST00000442667 MYO5BQ9ULV0 1848 aa14.66□□□□□ -0.06
CDCA4P1-201ENST00000442667 MYOM2P54296 1465 aa14.66□□□□□ -0.06
CDCA4P1-201ENST00000442667 CFAP70Q5T0N1 1121 aa14.66□□□□□ -0.06
CDCA4P1-201ENST00000442667 NRXN1Q9ULB1 1477 aa14.65□□□□□ -0.06
CDCA4P1-201ENST00000442667 PIK3C2GO75747 1445 aa14.65□□□□□ -0.06
CDCA4P1-201ENST00000442667 METP08581 1390 aa14.63□□□□□ -0.07
CDCA4P1-201ENST00000442667 NBPF8Q3BBV2 869 aa14.63□□□□□ -0.07
CDCA4P1-201ENST00000442667 ZNF335Q9H4Z2 1342 aaPredicted RBP14.63□□□□□ -0.07
CDCA4P1-201ENST00000442667 KCNA6P17658 529 aa14.62□□□□□ -0.07
CDCA4P1-201ENST00000442667 TMEM132EQ6IEE7 984 aa14.62□□□□□ -0.07
CDCA4P1-201ENST00000442667 SETBP1Q9Y6X0 1596 aa14.62□□□□□ -0.07
CDCA4P1-201ENST00000442667 PRAG1Q86YV5 1406 aa14.61□□□□□ -0.07
CDCA4P1-201ENST00000442667 PIK3R4Q99570 1358 aa14.6□□□□□ -0.07
CDCA4P1-201ENST00000442667 PPLO60437 1756 aa14.6□□□□□ -0.07
CDCA4P1-201ENST00000442667 NBPF1Q3BBV0 1214 aa14.6□□□□□ -0.07
CDCA4P1-201ENST00000442667 AMOTL2Q9Y2J4 779 aa14.6□□□□□ -0.07
CDCA4P1-201ENST00000442667 IQGAP1P46940 1657 aa14.6□□□□□ -0.07
CDCA4P1-201ENST00000442667 POLR1AO95602 1720 aaPredicted RBP14.59□□□□□ -0.07
CDCA4P1-201ENST00000442667 ALKQ9UM73 1620 aa14.59□□□□□ -0.07
CDCA4P1-201ENST00000442667 PTPRUQ92729 1446 aa14.58□□□□□ -0.07
CDCA4P1-201ENST00000442667 NRXN3Q9Y4C0 1643 aa14.58□□□□□ -0.08
CDCA4P1-201ENST00000442667 STK26Q9P289 416 aa14.57□□□□□ -0.08
CDCA4P1-201ENST00000442667 IFT172Q9UG01 1749 aa14.57□□□□□ -0.08
CDCA4P1-201ENST00000442667 LRPPRCP42704 1394 aaKnown RBP14.56□□□□□ -0.08
CDCA4P1-201ENST00000442667 DIP2AQ14689 1571 aa14.56□□□□□ -0.08
CDCA4P1-201ENST00000442667 ABCC11Q96J66 1382 aa14.55□□□□□ -0.08
CDCA4P1-201ENST00000442667 PROSER2Q86WR7 435 aaPredicted RBP14.54□□□□□ -0.08
CDCA4P1-201ENST00000442667 ASXL1Q8IXJ9 1541 aa14.53□□□□□ -0.08
CDCA4P1-201ENST00000442667 YTHDC2Q9H6S0 1430 aaKnown RBP14.53□□□□□ -0.08
CDCA4P1-201ENST00000442667 RBM33Q96EV2 1170 aaKnown RBP14.53□□□□□ -0.08
CDCA4P1-201ENST00000442667 SIRT1Q96EB6 747 aa14.52□□□□□ -0.09
CDCA4P1-201ENST00000442667 TRAK1Q9UPV9 953 aa14.52□□□□□ -0.09
CDCA4P1-201ENST00000442667 LTBP4Q8N2S1 1624 aa14.52□□□□□ -0.09
CDCA4P1-201ENST00000442667 ADGRB1O14514 1584 aa14.51□□□□□ -0.09
CDCA4P1-201ENST00000442667 ROCK2O75116 1388 aaKnown RBP14.51□□□□□ -0.09
CDCA4P1-201ENST00000442667 ROBO2Q9HCK4 1378 aa14.51□□□□□ -0.09
CDCA4P1-201ENST00000442667 WAPLQ7Z5K2 1190 aa14.51□□□□□ -0.09
CDCA4P1-201ENST00000442667 CARD11Q9BXL7 1154 aa14.5□□□□□ -0.09
CDCA4P1-201ENST00000442667 TECPR2O15040 1411 aa14.49□□□□□ -0.09
CDCA4P1-201ENST00000442667 TMEM94Q12767 1356 aa14.49□□□□□ -0.09
CDCA4P1-201ENST00000442667 GPRASP1Q5JY77 1395 aa14.49□□□□□ -0.09
CDCA4P1-201ENST00000442667 CERKQ8TCT0 537 aa14.49□□□□□ -0.09
CDCA4P1-201ENST00000442667 NWD1Q149M9 1564 aa14.48□□□□□ -0.09
CDCA4P1-201ENST00000442667 CPS1P31327 1500 aa14.48□□□□□ -0.09
CDCA4P1-201ENST00000442667 LRRC7Q96NW7 1537 aa14.48□□□□□ -0.09
CDCA4P1-201ENST00000442667 PRAM1Q96QH2 718 aa14.48□□□□□ -0.09
CDCA4P1-201ENST00000442667 SETD1AO15047 1707 aaKnown RBP14.48□□□□□ -0.09
CDCA4P1-201ENST00000442667 NKTRP30414 1462 aaKnown RBP14.48□□□□□ -0.09
CDCA4P1-201ENST00000442667 RALGAPBQ86X10 1494 aa14.48□□□□□ -0.09
CDCA4P1-201ENST00000442667 PLEKHH1Q9ULM0 1364 aa14.47□□□□□ -0.09
CDCA4P1-201ENST00000442667 POGKQ9P215 609 aa14.47□□□□□ -0.09
CDCA4P1-201ENST00000442667 PTCH1Q13635 1447 aa14.47□□□□□ -0.09
CDCA4P1-201ENST00000442667 FAM135BQ49AJ0 1406 aa14.46□□□□□ -0.09
CDCA4P1-201ENST00000442667 LAMC1P11047 1609 aa14.45□□□□□ -0.1
CDCA4P1-201ENST00000442667 SAFB2Q14151 953 aaKnown RBP eCLIP14.45□□□□□ -0.1
CDCA4P1-201ENST00000442667 C14orf37Q86TY3 774 aa14.45□□□□□ -0.1
CDCA4P1-201ENST00000442667 XRN1Q8IZH2 1706 aaKnown RBP14.44□□□□□ -0.1
CDCA4P1-201ENST00000442667 NCOA3Q9Y6Q9 1424 aa14.44□□□□□ -0.1
CDCA4P1-201ENST00000442667 CHD2O14647 1828 aaKnown RBP14.44□□□□□ -0.1
CDCA4P1-201ENST00000442667 C19orf44Q9H6X5 657 aa14.44□□□□□ -0.1
CDCA4P1-201ENST00000442667 STRCP1A6NGW2 1772 aa14.44□□□□□ -0.1
CDCA4P1-201ENST00000442667 ZEB1P37275 1124 aaPredicted RBP14.43□□□□□ -0.1
CDCA4P1-201ENST00000442667 KIAA1210Q9ULL0 1709 aa14.43□□□□□ -0.1
CDCA4P1-201ENST00000442667 DLC1Q96QB1 1528 aa14.42□□□□□ -0.1
CDCA4P1-201ENST00000442667 TRPM1Q7Z4N2 1603 aa14.42□□□□□ -0.1
CDCA4P1-201ENST00000442667 CENPJQ9HC77 1338 aaPredicted RBP14.41□□□□□ -0.1
CDCA4P1-201ENST00000442667 MSH6P52701 1360 aa14.4□□□□□ -0.1
CDCA4P1-201ENST00000442667 HIRIP3Q9BW71 556 aaPredicted RBP14.4□□□□□ -0.1
CDCA4P1-201ENST00000442667 MINK1Q8N4C8 1332 aaPredicted RBP14.4□□□□□ -0.1
CDCA4P1-201ENST00000442667 ST20-MTHFSA0A0A6YYL1 179 aa14.39□□□□□ -0.11
CDCA4P1-201ENST00000442667 ATF3P18847 181 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms