RNA–Protein interactions for RNA: ENST00000442309.5

GCFC2-204, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5

Gene GCFC2, Length 642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-204ENST00000442309 ZFYVE9O95405 1425 aa31.61■■■□□ 2.65
GCFC2-204ENST00000442309 RIMS2Q9UQ26 1411 aa31.61■■■□□ 2.65
GCFC2-204ENST00000442309 ALKQ9UM73 1620 aa31.6■■■□□ 2.65
GCFC2-204ENST00000442309 PPP1R15AO75807 674 aaPredicted RBP31.59■■■□□ 2.65
GCFC2-204ENST00000442309 NAIPQ13075 1403 aa31.58■■■□□ 2.65
GCFC2-204ENST00000442309 HSPA1LP34931 641 aa31.56■■■□□ 2.64
GCFC2-204ENST00000442309 XIRP1Q702N8 1843 aaKnown RBP31.56■■■□□ 2.64
GCFC2-204ENST00000442309 HDGFP51858 240 aaKnown RBP31.55■■■□□ 2.64
GCFC2-204ENST00000442309 PLEKHG1Q9ULL1 1385 aa31.54■■■□□ 2.64
GCFC2-204ENST00000442309 SPHKAPQ2M3C7 1700 aa31.53■■■□□ 2.64
GCFC2-204ENST00000442309 KCNA6P17658 529 aa31.53■■■□□ 2.64
GCFC2-204ENST00000442309 NUTM2DQ5VT03 806 aaPredicted RBP31.53■■■□□ 2.64
GCFC2-204ENST00000442309 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.49■■■□□ 2.63
GCFC2-204ENST00000442309 HFM1A2PYH4 1435 aa31.48■■■□□ 2.63
GCFC2-204ENST00000442309 TMEM94Q12767 1356 aa31.47■■■□□ 2.63
GCFC2-204ENST00000442309 NWD1Q149M9 1564 aa31.47■■■□□ 2.63
GCFC2-204ENST00000442309 PROSER2Q86WR7 435 aaPredicted RBP31.46■■■□□ 2.63
GCFC2-204ENST00000442309 RBM33Q96EV2 1170 aaKnown RBP31.46■■■□□ 2.63
GCFC2-204ENST00000442309 TRIM52Q96A61 297 aa31.45■■■□□ 2.63
GCFC2-204ENST00000442309 NKTRP30414 1462 aaKnown RBP31.43■■■□□ 2.62
GCFC2-204ENST00000442309 CHD2O14647 1828 aaKnown RBP31.4■■■□□ 2.62
GCFC2-204ENST00000442309 CLTCL1P53675 1640 aa31.39■■■□□ 2.62
GCFC2-204ENST00000442309 ZNF326Q5BKZ1 582 aaKnown RBP31.38■■■□□ 2.61
GCFC2-204ENST00000442309 TBX22Q9Y458 520 aa31.38■■■□□ 2.61
GCFC2-204ENST00000442309 ADAMTS13Q76LX8 1427 aa31.38■■■□□ 2.61
GCFC2-204ENST00000442309 ILDR2Q71H61 639 aa31.37■■■□□ 2.61
GCFC2-204ENST00000442309 TRPM2O94759 1503 aa31.37■■■□□ 2.61
GCFC2-204ENST00000442309 DIP2AQ14689 1571 aa31.35■■■□□ 2.61
GCFC2-204ENST00000442309 SLC4A1APQ9BWU0 796 aaKnown RBP31.32■■■□□ 2.6
GCFC2-204ENST00000442309 KIF1BO60333 1816 aa31.3■■■□□ 2.6
GCFC2-204ENST00000442309 MED1Q15648 1581 aaPredicted RBP31.3■■■□□ 2.6
GCFC2-204ENST00000442309 MSH6P52701 1360 aa31.3■■■□□ 2.6
GCFC2-204ENST00000442309 NRXN3Q9Y4C0 1643 aa31.26■■■□□ 2.59
GCFC2-204ENST00000442309 PIK3R4Q99570 1358 aa31.26■■■□□ 2.59
GCFC2-204ENST00000442309 FAM135BQ49AJ0 1406 aa31.25■■■□□ 2.59
GCFC2-204ENST00000442309 NEXMIFQ5QGS0 1516 aa31.24■■■□□ 2.59
GCFC2-204ENST00000442309 SETBP1Q9Y6X0 1596 aa31.24■■■□□ 2.59
GCFC2-204ENST00000442309 ROBO1Q9Y6N7 1651 aa31.23■■■□□ 2.59
GCFC2-204ENST00000442309 C14orf37Q86TY3 774 aa31.23■■■□□ 2.59
GCFC2-204ENST00000442309 PTPRUQ92729 1446 aa31.22■■■□□ 2.59
GCFC2-204ENST00000442309 FOXD1Q16676 465 aa31.21■■■□□ 2.59
GCFC2-204ENST00000442309 AMOTL2Q9Y2J4 779 aa31.21■■■□□ 2.59
GCFC2-204ENST00000442309 NCOA3Q9Y6Q9 1424 aa31.16■■■□□ 2.58
GCFC2-204ENST00000442309 SLAIN2Q9P270 581 aa31.16■■■□□ 2.58
GCFC2-204ENST00000442309 METP08581 1390 aa31.15■■■□□ 2.58
GCFC2-204ENST00000442309 XRN1Q8IZH2 1706 aaKnown RBP31.14■■■□□ 2.58
GCFC2-204ENST00000442309 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.12■■■□□ 2.57
GCFC2-204ENST00000442309 MPHOSPH9Q99550 1183 aa31.11■■■□□ 2.57
GCFC2-204ENST00000442309 PHF23Q9BUL5 403 aaPredicted RBP31.11■■■□□ 2.57
GCFC2-204ENST00000442309 C19orf44Q9H6X5 657 aa31.09■■■□□ 2.57
GCFC2-204ENST00000442309 VGFO15240 615 aaPredicted RBP31.08■■■□□ 2.57
GCFC2-204ENST00000442309 ATF3P18847 181 aa31.08■■■□□ 2.57
GCFC2-204ENST00000442309 SOCS7O14512 581 aa31.07■■■□□ 2.56
GCFC2-204ENST00000442309 SETD5Q9C0A6 1442 aa31.07■■■□□ 2.56
GCFC2-204ENST00000442309 CADPS2Q86UW7 1296 aa31.06■■■□□ 2.56
GCFC2-204ENST00000442309 PPLO60437 1756 aa31.06■■■□□ 2.56
GCFC2-204ENST00000442309 CCDC144AA2RUR9 1427 aa31.06■■■□□ 2.56
GCFC2-204ENST00000442309 RPGRIP1LQ68CZ1 1315 aa31.05■■■□□ 2.56
GCFC2-204ENST00000442309 PHLPP1O60346 1717 aa31.05■■■□□ 2.56
GCFC2-204ENST00000442309 SETD1AO15047 1707 aaKnown RBP31.01■■■□□ 2.56
GCFC2-204ENST00000442309 RGL3Q3MIN7 710 aa30.99■■■□□ 2.55
GCFC2-204ENST00000442309 DCCP43146 1447 aa30.97■■■□□ 2.55
GCFC2-204ENST00000442309 RAB3GAP2Q9H2M9 1393 aa30.96■■■□□ 2.55
GCFC2-204ENST00000442309 SPATA31E1Q6ZUB1 1445 aa30.95■■■□□ 2.54
GCFC2-204ENST00000442309 ACIN1Q9UKV3 1341 aaKnown RBP30.95■■■□□ 2.54
GCFC2-204ENST00000442309 COL16A1Q07092 1604 aaPredicted RBP30.94■■■□□ 2.54
GCFC2-204ENST00000442309 NALCNQ8IZF0 1738 aa30.93■■■□□ 2.54
GCFC2-204ENST00000442309 ADGRL3Q9HAR2 1447 aa30.93■■■□□ 2.54
GCFC2-204ENST00000442309 ADGRF5Q8IZF2 1346 aa30.91■■■□□ 2.54
GCFC2-204ENST00000442309 JCADQ9P266 1359 aa30.91■■■□□ 2.54
GCFC2-204ENST00000442309 BRINP3Q76B58 766 aa30.9■■■□□ 2.54
GCFC2-204ENST00000442309 AHDC1Q5TGY3 1603 aaPredicted RBP30.9■■■□□ 2.54
GCFC2-204ENST00000442309 IFT172Q9UG01 1749 aa30.9■■■□□ 2.54
GCFC2-204ENST00000442309 MST1RQ04912 1400 aa30.9■■■□□ 2.54
GCFC2-204ENST00000442309 PTCH1Q13635 1447 aa30.9■■■□□ 2.54
GCFC2-204ENST00000442309 ROBO2Q9HCK4 1378 aa30.89■■■□□ 2.54
GCFC2-204ENST00000442309 ANKRD30BQ9BXX2 1392 aa30.86■■■□□ 2.53
GCFC2-204ENST00000442309 ASXL1Q8IXJ9 1541 aa30.85■■■□□ 2.53
GCFC2-204ENST00000442309 RGS17Q9UGC6 210 aaPredicted RBP30.85■■■□□ 2.53
GCFC2-204ENST00000442309 PRAG1Q86YV5 1406 aa30.81■■■□□ 2.52
GCFC2-204ENST00000442309 PIK3C2GO75747 1445 aa30.78■■■□□ 2.52
GCFC2-204ENST00000442309 NHSL1Q5SYE7 1610 aa30.77■■■□□ 2.52
GCFC2-204ENST00000442309 STK26Q9P289 416 aa30.77■■■□□ 2.52
GCFC2-204ENST00000442309 SHPRHQ149N8 1683 aa30.76■■■□□ 2.51
GCFC2-204ENST00000442309 TMEM132EQ6IEE7 984 aa30.75■■■□□ 2.51
GCFC2-204ENST00000442309 C1orf167Q5SNV9 1468 aa30.75■■■□□ 2.51
GCFC2-204ENST00000442309 DDX17Q92841 729 aaKnown RBP30.74■■■□□ 2.51
GCFC2-204ENST00000442309 SPATA31A6Q5VVP1 1343 aa30.73■■■□□ 2.51
GCFC2-204ENST00000442309 LRP6O75581 1613 aa30.73■■■□□ 2.51
GCFC2-204ENST00000442309 LRPPRCP42704 1394 aaKnown RBP30.71■■■□□ 2.51
GCFC2-204ENST00000442309 POTEAQ6S8J7 498 aa30.71■■■□□ 2.51
GCFC2-204ENST00000442309 MEX3CQ5U5Q3 659 aaKnown RBP30.7■■■□□ 2.51
GCFC2-204ENST00000442309 TECPR2O15040 1411 aa30.68■■■□□ 2.5
GCFC2-204ENST00000442309 WAPLQ7Z5K2 1190 aa30.68■■■□□ 2.5
GCFC2-204ENST00000442309 MYOM2P54296 1465 aa30.68■■■□□ 2.5
GCFC2-204ENST00000442309 KNDC1Q76NI1 1749 aa30.67■■■□□ 2.5
GCFC2-204ENST00000442309 ORAI2Q96SN7 254 aa30.67■■■□□ 2.5
GCFC2-204ENST00000442309 NRXN1Q9ULB1 1477 aa30.66■■■□□ 2.5
GCFC2-204ENST00000442309 NUTM2BA6NNL0 878 aaPredicted RBP30.66■■■□□ 2.5
GCFC2-204ENST00000442309 NUTM2EB1AL46 878 aaPredicted RBP30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms