RNA–Protein interactions for RNA: ENST00000441738.1

TIMP1-203, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 5

Gene TIMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-203ENST00000441738 ZFYVE9O95405 1425 aa12.45□□□□□ -0.42
TIMP1-203ENST00000441738 XIRP1Q702N8 1843 aaKnown RBP12.44□□□□□ -0.42
TIMP1-203ENST00000441738 PPLO60437 1756 aa12.44□□□□□ -0.42
TIMP1-203ENST00000441738 CPS1P31327 1500 aa12.44□□□□□ -0.42
TIMP1-203ENST00000441738 IDI1Q13907 227 aa12.44□□□□□ -0.42
TIMP1-203ENST00000441738 SETD1AO15047 1707 aaKnown RBP12.43□□□□□ -0.42
TIMP1-203ENST00000441738 POTEAQ6S8J7 498 aa12.43□□□□□ -0.42
TIMP1-203ENST00000441738 NEXMIFQ5QGS0 1516 aa12.42□□□□□ -0.42
TIMP1-203ENST00000441738 SCAF11Q99590 1463 aaKnown RBP12.41□□□□□ -0.42
TIMP1-203ENST00000441738 TMEM2Q9UHN6 1383 aa12.41□□□□□ -0.42
TIMP1-203ENST00000441738 LTKP29376 864 aa12.39□□□□□ -0.43
TIMP1-203ENST00000441738 FOXD1Q16676 465 aa12.39□□□□□ -0.43
TIMP1-203ENST00000441738 NPHP4O75161 1426 aaPredicted RBP12.38□□□□□ -0.43
TIMP1-203ENST00000441738 CHD2O14647 1828 aaKnown RBP12.38□□□□□ -0.43
TIMP1-203ENST00000441738 SLC52A1Q9NWF4 448 aa12.37□□□□□ -0.43
TIMP1-203ENST00000441738 NWD1Q149M9 1564 aa12.37□□□□□ -0.43
TIMP1-203ENST00000441738 THEMISQ8N1K5 641 aaPredicted RBP12.36□□□□□ -0.43
TIMP1-203ENST00000441738 TRIM52Q96A61 297 aa12.36□□□□□ -0.43
TIMP1-203ENST00000441738 MPHOSPH9Q99550 1183 aa12.36□□□□□ -0.43
TIMP1-203ENST00000441738 ALKQ9UM73 1620 aa12.36□□□□□ -0.43
TIMP1-203ENST00000441738 SPATA31E1Q6ZUB1 1445 aa12.36□□□□□ -0.43
TIMP1-203ENST00000441738 RIMS2Q9UQ26 1411 aa12.36□□□□□ -0.43
TIMP1-203ENST00000441738 SETBP1Q9Y6X0 1596 aa12.35□□□□□ -0.43
TIMP1-203ENST00000441738 SLC4A1APQ9BWU0 796 aaKnown RBP12.35□□□□□ -0.43
TIMP1-203ENST00000441738 UPF1Q92900 1129 aaKnown RBP eCLIP12.34□□□□□ -0.43
TIMP1-203ENST00000441738 ADAMTS13Q76LX8 1427 aa12.33□□□□□ -0.44
TIMP1-203ENST00000441738 XRN1Q8IZH2 1706 aaKnown RBP12.33□□□□□ -0.44
TIMP1-203ENST00000441738 DIP2AQ14689 1571 aa12.32□□□□□ -0.44
TIMP1-203ENST00000441738 HRCP23327 699 aa12.32□□□□□ -0.44
TIMP1-203ENST00000441738 ANKRD30BQ9BXX2 1392 aa12.31□□□□□ -0.44
TIMP1-203ENST00000441738 ANKLE2Q86XL3 938 aa12.31□□□□□ -0.44
TIMP1-203ENST00000441738 PLEKHG1Q9ULL1 1385 aa12.3□□□□□ -0.44
TIMP1-203ENST00000441738 ASXL1Q8IXJ9 1541 aa12.3□□□□□ -0.44
TIMP1-203ENST00000441738 CCDC144AA2RUR9 1427 aa12.28□□□□□ -0.44
TIMP1-203ENST00000441738 LRRC7Q96NW7 1537 aa12.28□□□□□ -0.44
TIMP1-203ENST00000441738 TXNDC2Q86VQ3 553 aa12.28□□□□□ -0.44
TIMP1-203ENST00000441738 NRXN1Q9ULB1 1477 aa12.27□□□□□ -0.45
TIMP1-203ENST00000441738 NUTM2DQ5VT03 806 aaPredicted RBP12.26□□□□□ -0.45
TIMP1-203ENST00000441738 PTPRUQ92729 1446 aa12.26□□□□□ -0.45
TIMP1-203ENST00000441738 TRIM26Q12899 539 aaPredicted RBP12.25□□□□□ -0.45
TIMP1-203ENST00000441738 STAG3Q9UJ98 1225 aa12.25□□□□□ -0.45
TIMP1-203ENST00000441738 KNDC1Q76NI1 1749 aa12.25□□□□□ -0.45
TIMP1-203ENST00000441738 CHGAP10645 457 aaKnown RBP12.24□□□□□ -0.45
TIMP1-203ENST00000441738 MYOM2P54296 1465 aa12.24□□□□□ -0.45
TIMP1-203ENST00000441738 DHX57Q6P158 1386 aaKnown RBP12.24□□□□□ -0.45
TIMP1-203ENST00000441738 NALCNQ8IZF0 1738 aa12.24□□□□□ -0.45
TIMP1-203ENST00000441738 ACIN1Q9UKV3 1341 aaKnown RBP12.24□□□□□ -0.45
TIMP1-203ENST00000441738 NKTRP30414 1462 aaKnown RBP12.23□□□□□ -0.45
TIMP1-203ENST00000441738 SLC26A8Q96RN1 970 aa12.23□□□□□ -0.45
TIMP1-203ENST00000441738 LAMC1P11047 1609 aa12.22□□□□□ -0.45
TIMP1-203ENST00000441738 PIK3C2GO75747 1445 aa12.22□□□□□ -0.45
TIMP1-203ENST00000441738 EID1Q9Y6B2 187 aa12.22□□□□□ -0.45
TIMP1-203ENST00000441738 SRCAPQ6ZRS2 3230 aa12.2□□□□□ -0.46
TIMP1-203ENST00000441738 PRAG1Q86YV5 1406 aa12.2□□□□□ -0.46
TIMP1-203ENST00000441738 METP08581 1390 aa12.2□□□□□ -0.46
TIMP1-203ENST00000441738 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.2□□□□□ -0.46
TIMP1-203ENST00000441738 ADGRF5Q8IZF2 1346 aa12.19□□□□□ -0.46
TIMP1-203ENST00000441738 ADGRB1O14514 1584 aa12.19□□□□□ -0.46
TIMP1-203ENST00000441738 FAM135BQ49AJ0 1406 aa12.19□□□□□ -0.46
TIMP1-203ENST00000441738 KIAA1210Q9ULL0 1709 aa12.18□□□□□ -0.46
TIMP1-203ENST00000441738 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.18□□□□□ -0.46
TIMP1-203ENST00000441738 PIK3R4Q99570 1358 aa12.18□□□□□ -0.46
TIMP1-203ENST00000441738 RPGRIP1LQ68CZ1 1315 aa12.17□□□□□ -0.46
TIMP1-203ENST00000441738 ZNF326Q5BKZ1 582 aaKnown RBP12.17□□□□□ -0.46
TIMP1-203ENST00000441738 TBX22Q9Y458 520 aa12.17□□□□□ -0.46
TIMP1-203ENST00000441738 ARHGEF28Q8N1W1 1705 aaKnown RBP12.17□□□□□ -0.46
TIMP1-203ENST00000441738 PPP1R15AO75807 674 aaPredicted RBP12.16□□□□□ -0.46
TIMP1-203ENST00000441738 TRPM1Q7Z4N2 1603 aa12.15□□□□□ -0.46
TIMP1-203ENST00000441738 KCNA6P17658 529 aa12.15□□□□□ -0.46
TIMP1-203ENST00000441738 RGL3Q3MIN7 710 aa12.15□□□□□ -0.46
TIMP1-203ENST00000441738 ZNF772Q68DY9 489 aaPredicted RBP12.14□□□□□ -0.47
TIMP1-203ENST00000441738 TMEM94Q12767 1356 aa12.14□□□□□ -0.47
TIMP1-203ENST00000441738 TECPR2O15040 1411 aa12.13□□□□□ -0.47
TIMP1-203ENST00000441738 PTCH1Q13635 1447 aa12.13□□□□□ -0.47
TIMP1-203ENST00000441738 ROBO1Q9Y6N7 1651 aa12.13□□□□□ -0.47
TIMP1-203ENST00000441738 RBM33Q96EV2 1170 aaKnown RBP12.12□□□□□ -0.47
TIMP1-203ENST00000441738 ROBO2Q9HCK4 1378 aa12.11□□□□□ -0.47
TIMP1-203ENST00000441738 HDGFP51858 240 aaKnown RBP12.11□□□□□ -0.47
TIMP1-203ENST00000441738 SIN3AQ96ST3 1273 aa12.11□□□□□ -0.47
TIMP1-203ENST00000441738 RGPD8O14715 1765 aaPredicted RBP12.1□□□□□ -0.47
TIMP1-203ENST00000441738 JCADQ9P266 1359 aa12.1□□□□□ -0.47
TIMP1-203ENST00000441738 VGFO15240 615 aaPredicted RBP12.1□□□□□ -0.47
TIMP1-203ENST00000441738 RXRBP28702 533 aa12.1□□□□□ -0.47
TIMP1-203ENST00000441738 FMN2Q9NZ56 1722 aa12.09□□□□□ -0.47
TIMP1-203ENST00000441738 PCGF6Q9BYE7 350 aa12.09□□□□□ -0.47
TIMP1-203ENST00000441738 CDC42BPGQ6DT37 1551 aa12.09□□□□□ -0.47
TIMP1-203ENST00000441738 DLC1Q96QB1 1528 aa12.08□□□□□ -0.48
TIMP1-203ENST00000441738 MEX3CQ5U5Q3 659 aaKnown RBP12.08□□□□□ -0.48
TIMP1-203ENST00000441738 BCANQ96GW7 911 aa12.08□□□□□ -0.48
TIMP1-203ENST00000441738 AMOTL2Q9Y2J4 779 aa12.08□□□□□ -0.48
TIMP1-203ENST00000441738 YTHDC2Q9H6S0 1430 aaKnown RBP12.08□□□□□ -0.48
TIMP1-203ENST00000441738 ADGRL3Q9HAR2 1447 aa12.08□□□□□ -0.48
TIMP1-203ENST00000441738 NCOA3Q9Y6Q9 1424 aa12.08□□□□□ -0.48
TIMP1-203ENST00000441738 NHSL1Q5SYE7 1610 aa12.08□□□□□ -0.48
TIMP1-203ENST00000441738 USP32Q8NFA0 1604 aa12.08□□□□□ -0.48
TIMP1-203ENST00000441738 LRPPRCP42704 1394 aaKnown RBP12.07□□□□□ -0.48
TIMP1-203ENST00000441738 ADGRB2O60241 1585 aa12.07□□□□□ -0.48
TIMP1-203ENST00000441738 CFAP70Q5T0N1 1121 aa12.07□□□□□ -0.48
TIMP1-203ENST00000441738 C14orf93Q9H972 538 aaKnown RBP12.07□□□□□ -0.48
TIMP1-203ENST00000441738 ZRANB1Q9UGI0 708 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms