RNA–Protein interactions for RNA: ENST00000441560.6

ATL1-202, Transcript of atlastin GTPase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATL1, Length 2,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-202ENST00000441560 SASS6Q6UVJ0 657 aa12.33□□□□□ -0.44
ATL1-202ENST00000441560 PLEKHH1Q9ULM0 1364 aa12.33□□□□□ -0.44
ATL1-202ENST00000441560 PABPN1Q86U42 306 aaKnown RBP eCLIP12.32□□□□□ -0.44
ATL1-202ENST00000441560 CLUAP1Q96AJ1 413 aa12.32□□□□□ -0.44
ATL1-202ENST00000441560 IGSF3O75054 1194 aa12.32□□□□□ -0.44
ATL1-202ENST00000441560 CSPP1Q1MSJ5 1256 aa12.32□□□□□ -0.44
ATL1-202ENST00000441560 CERS3Q8IU89 383 aa12.32□□□□□ -0.44
ATL1-202ENST00000441560 PANK3Q9H999 370 aa12.32□□□□□ -0.44
ATL1-202ENST00000441560 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.32□□□□□ -0.44
ATL1-202ENST00000441560 JARID2Q92833 1246 aaPredicted RBP12.31□□□□□ -0.44
ATL1-202ENST00000441560 COG6Q9Y2V7 657 aa12.31□□□□□ -0.44
ATL1-202ENST00000441560 ATAD2BQ9ULI0 1458 aa12.31□□□□□ -0.44
ATL1-202ENST00000441560 CHRM1P11229 460 aaPredicted RBP12.3□□□□□ -0.44
ATL1-202ENST00000441560 HS1BP3Q53T59 392 aa12.3□□□□□ -0.44
ATL1-202ENST00000441560 TSC1Q92574 1164 aa12.3□□□□□ -0.44
ATL1-202ENST00000441560 PANK1Q8TE04 598 aa12.3□□□□□ -0.44
ATL1-202ENST00000441560 IRX3P78415 501 aaPredicted RBP12.29□□□□□ -0.44
ATL1-202ENST00000441560 CGNL1Q0VF96 1302 aa12.29□□□□□ -0.44
ATL1-202ENST00000441560 ZKSCAN5Q9Y2L8 839 aa12.29□□□□□ -0.44
ATL1-202ENST00000441560 DDX49Q9Y6V7 483 aaKnown RBP12.29□□□□□ -0.44
ATL1-202ENST00000441560 TAF3Q5VWG9 929 aa12.28□□□□□ -0.44
ATL1-202ENST00000441560 RGS22Q8NE09 1264 aa12.28□□□□□ -0.44
ATL1-202ENST00000441560 FOXD4L1Q9NU39 408 aa12.28□□□□□ -0.44
ATL1-202ENST00000441560 PDZRN3Q9UPQ7 1066 aa12.28□□□□□ -0.44
ATL1-202ENST00000441560 KDM2AQ9Y2K7 1162 aa12.28□□□□□ -0.44
ATL1-202ENST00000441560 MBD5Q9P267 1494 aa12.27□□□□□ -0.44
ATL1-202ENST00000441560 PER1O15534 1290 aaPredicted RBP12.27□□□□□ -0.45
ATL1-202ENST00000441560 HSP90AB1P08238 724 aaKnown RBP12.27□□□□□ -0.45
ATL1-202ENST00000441560 SLFN5Q08AF3 891 aa12.27□□□□□ -0.45
ATL1-202ENST00000441560 WDR43Q15061 677 aaKnown RBP eCLIP12.27□□□□□ -0.45
ATL1-202ENST00000441560 DDIT3P35638 169 aa12.27□□□□□ -0.45
ATL1-202ENST00000441560 RAB3GAP1Q15042 981 aa12.27□□□□□ -0.45
ATL1-202ENST00000441560 ATP2B3Q16720 1220 aa12.27□□□□□ -0.45
ATL1-202ENST00000441560 INSRP06213 1382 aa12.26□□□□□ -0.45
ATL1-202ENST00000441560 PTMSP20962 102 aa12.26□□□□□ -0.45
ATL1-202ENST00000441560 IRX5P78411 483 aaPredicted RBP12.26□□□□□ -0.45
ATL1-202ENST00000441560 SPDYE4A6NLX3 237 aa12.26□□□□□ -0.45
ATL1-202ENST00000441560 GOLGA6L22H0YM25 854 aa12.26□□□□□ -0.45
ATL1-202ENST00000441560 SPINK5Q9NQ38 1064 aaPredicted RBP12.26□□□□□ -0.45
ATL1-202ENST00000441560 AEBP1Q8IUX7 1158 aa12.25□□□□□ -0.45
ATL1-202ENST00000441560 KIF14Q15058 1648 aa12.25□□□□□ -0.45
ATL1-202ENST00000441560 SUPT6HQ7KZ85 1726 aaKnown RBP12.25□□□□□ -0.45
ATL1-202ENST00000441560 ZNF710Q8N1W2 664 aa12.25□□□□□ -0.45
ATL1-202ENST00000441560 ZNF521Q96K83 1311 aa12.25□□□□□ -0.45
ATL1-202ENST00000441560 RTEL1-TNFRSF6BF6WH68 1400 aa12.25□□□□□ -0.45
ATL1-202ENST00000441560 FAM177BA6PVY3 158 aa12.24□□□□□ -0.45
ATL1-202ENST00000441560 SNAPC4Q5SXM2 1469 aa12.24□□□□□ -0.45
ATL1-202ENST00000441560 PDLIM2Q96JY6 352 aa12.24□□□□□ -0.45
ATL1-202ENST00000441560 CIZ1Q9ULV3 898 aaPredicted RBP12.24□□□□□ -0.45
ATL1-202ENST00000441560 KCNJ4P48050 445 aa12.24□□□□□ -0.45
ATL1-202ENST00000441560 PDE3AQ14432 1141 aa12.24□□□□□ -0.45
ATL1-202ENST00000441560 KLHL40Q2TBA0 621 aa12.24□□□□□ -0.45
ATL1-202ENST00000441560 MYRIPQ8NFW9 859 aa12.24□□□□□ -0.45
ATL1-202ENST00000441560 PMFBP1Q8TBY8 1022 aa12.24□□□□□ -0.45
ATL1-202ENST00000441560 RBSNQ9H1K0 784 aa12.24□□□□□ -0.45
ATL1-202ENST00000441560 EFCAB5A4FU69 1503 aa12.23□□□□□ -0.45
ATL1-202ENST00000441560 CAVIN1Q6NZI2 390 aaKnown RBP12.23□□□□□ -0.45
ATL1-202ENST00000441560 PCDHB15Q9Y5E8 787 aa12.23□□□□□ -0.45
ATL1-202ENST00000441560 KIF21AQ7Z4S6 1674 aa12.23□□□□□ -0.45
ATL1-202ENST00000441560 SMC5Q8IY18 1101 aa12.23□□□□□ -0.45
ATL1-202ENST00000441560 CCDC146Q8IYE0 955 aa12.23□□□□□ -0.45
ATL1-202ENST00000441560 NCOA3Q9Y6Q9 1424 aa12.23□□□□□ -0.45
ATL1-202ENST00000441560 SSFA2P28290 1259 aa12.22□□□□□ -0.45
ATL1-202ENST00000441560 MCM5P33992 734 aa12.22□□□□□ -0.45
ATL1-202ENST00000441560 ZNF771Q7L3S4 317 aaPredicted RBP12.22□□□□□ -0.45
ATL1-202ENST00000441560 NKTRP30414 1462 aaKnown RBP12.22□□□□□ -0.45
ATL1-202ENST00000441560 E9PCH4 1651 aa12.22□□□□□ -0.45
ATL1-202ENST00000441560 RALGAPBQ86X10 1494 aa12.21□□□□□ -0.45
ATL1-202ENST00000441560 UGGT2Q9NYU1 1516 aa12.21□□□□□ -0.45
ATL1-202ENST00000441560 IBTKQ9P2D0 1353 aaPredicted RBP12.21□□□□□ -0.45
ATL1-202ENST00000441560 ZNF608Q9ULD9 1512 aaPredicted RBP12.21□□□□□ -0.46
ATL1-202ENST00000441560 TCOF1Q13428 1488 aaKnown RBP12.21□□□□□ -0.46
ATL1-202ENST00000441560 ZSCAN23Q3MJ62 389 aa12.2□□□□□ -0.46
ATL1-202ENST00000441560 RNF216Q9NWF9 866 aaPredicted RBP12.2□□□□□ -0.46
ATL1-202ENST00000441560 CCDC39Q9UFE4 941 aa12.2□□□□□ -0.46
ATL1-202ENST00000441560 PRIM1P49642 420 aaKnown RBP12.2□□□□□ -0.46
ATL1-202ENST00000441560 ZNF445P59923 1031 aa12.2□□□□□ -0.46
ATL1-202ENST00000441560 ZBTB9Q96C00 473 aa12.2□□□□□ -0.46
ATL1-202ENST00000441560 UNC13AQ9UPW8 1703 aa12.2□□□□□ -0.46
ATL1-202ENST00000441560 PTMAP06454 111 aaKnown RBP12.2□□□□□ -0.46
ATL1-202ENST00000441560 EHBP1L1Q8N3D4 1523 aa12.19□□□□□ -0.46
ATL1-202ENST00000441560 VGFO15240 615 aaPredicted RBP12.19□□□□□ -0.46
ATL1-202ENST00000441560 KIAA2012Q0VF49 1180 aa12.19□□□□□ -0.46
ATL1-202ENST00000441560 PKD2Q13563 968 aa12.19□□□□□ -0.46
ATL1-202ENST00000441560 TRMT2AQ8IZ69 625 aaKnown RBP12.19□□□□□ -0.46
ATL1-202ENST00000441560 SAMD1Q6SPF0 538 aaPredicted RBP12.19□□□□□ -0.46
ATL1-202ENST00000441560 ZMYM3Q14202 1370 aa12.18□□□□□ -0.46
ATL1-202ENST00000441560 BAG4O95429 457 aaKnown RBP12.18□□□□□ -0.46
ATL1-202ENST00000441560 RWDD1Q9H446 243 aaPredicted RBP12.18□□□□□ -0.46
ATL1-202ENST00000441560 APAF1O14727 1248 aa12.18□□□□□ -0.46
ATL1-202ENST00000441560 SNX21Q969T3 373 aa12.18□□□□□ -0.46
ATL1-202ENST00000441560 CHMP4CQ96CF2 233 aa12.18□□□□□ -0.46
ATL1-202ENST00000441560 DNAJC2Q99543 621 aaKnown RBP12.18□□□□□ -0.46
ATL1-202ENST00000441560 CTTNBP2Q8WZ74 1663 aa12.18□□□□□ -0.46
ATL1-202ENST00000441560 MCTP1Q6DN14 999 aa12.17□□□□□ -0.46
ATL1-202ENST00000441560 PDCL2Q8N4E4 241 aa12.17□□□□□ -0.46
ATL1-202ENST00000441560 KIF3AQ9Y496 699 aa12.17□□□□□ -0.46
ATL1-202ENST00000441560 HMGN5P82970 282 aaKnown RBP12.16□□□□□ -0.46
ATL1-202ENST00000441560 DMRT2Q9Y5R5 561 aa12.16□□□□□ -0.46
ATL1-202ENST00000441560 U2AF2P26368 475 aaKnown RBP eCLIP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms