RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 NEXMIFQ5QGS0 1516 aa30.19■■■□□ 2.42
VPS13B-204ENST00000441350 MYOM2P54296 1465 aa30.18■■■□□ 2.42
VPS13B-204ENST00000441350 PRAG1Q86YV5 1406 aa30.17■■■□□ 2.42
VPS13B-204ENST00000441350 CEP170BQ9Y4F5 1589 aaPredicted RBP30.14■■■□□ 2.42
VPS13B-204ENST00000441350 ZNF142P52746 1687 aaPredicted RBP30.13■■■□□ 2.41
VPS13B-204ENST00000441350 NRXN1Q9ULB1 1477 aa30.13■■■□□ 2.41
VPS13B-204ENST00000441350 ZFYVE9O95405 1425 aa30.12■■■□□ 2.41
VPS13B-204ENST00000441350 ADGRF5Q8IZF2 1346 aa30.09■■■□□ 2.41
VPS13B-204ENST00000441350 VGFO15240 615 aaPredicted RBP30.09■■■□□ 2.41
VPS13B-204ENST00000441350 RIMS2Q9UQ26 1411 aa30.09■■■□□ 2.41
VPS13B-204ENST00000441350 TMEM2Q9UHN6 1383 aa30.08■■■□□ 2.41
VPS13B-204ENST00000441350 RALGAPBQ86X10 1494 aa30.06■■■□□ 2.4
VPS13B-204ENST00000441350 THEMISQ8N1K5 641 aaPredicted RBP30.06■■■□□ 2.4
VPS13B-204ENST00000441350 TRPM1Q7Z4N2 1603 aa30.05■■■□□ 2.4
VPS13B-204ENST00000441350 SLIT1O75093 1534 aa30.05■■■□□ 2.4
VPS13B-204ENST00000441350 ARHGAP23Q9P227 1491 aa30.05■■■□□ 2.4
VPS13B-204ENST00000441350 NUTM2DQ5VT03 806 aaPredicted RBP30.04■■■□□ 2.4
VPS13B-204ENST00000441350 PIK3C2GO75747 1445 aa30.04■■■□□ 2.4
VPS13B-204ENST00000441350 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.02■■■□□ 2.4
VPS13B-204ENST00000441350 HDGFP51858 240 aaKnown RBP30.01■■■□□ 2.39
VPS13B-204ENST00000441350 KIAA1210Q9ULL0 1709 aa30.01■■■□□ 2.39
VPS13B-204ENST00000441350 GPRASP1Q5JY77 1395 aa29.95■■■□□ 2.39
VPS13B-204ENST00000441350 LTKP29376 864 aa29.95■■■□□ 2.38
VPS13B-204ENST00000441350 NBPF1Q3BBV0 1214 aa29.95■■■□□ 2.38
VPS13B-204ENST00000441350 C14orf93Q9H972 538 aaKnown RBP29.94■■■□□ 2.38
VPS13B-204ENST00000441350 ROCK2O75116 1388 aaKnown RBP29.94■■■□□ 2.38
VPS13B-204ENST00000441350 CFAP70Q5T0N1 1121 aa29.93■■■□□ 2.38
VPS13B-204ENST00000441350 TXNDC2Q86VQ3 553 aa29.93■■■□□ 2.38
VPS13B-204ENST00000441350 EID1Q9Y6B2 187 aa29.93■■■□□ 2.38
VPS13B-204ENST00000441350 LAMC1P11047 1609 aa29.91■■■□□ 2.38
VPS13B-204ENST00000441350 SCAF11Q99590 1463 aaKnown RBP29.9■■■□□ 2.38
VPS13B-204ENST00000441350 SETBP1Q9Y6X0 1596 aa29.89■■■□□ 2.38
VPS13B-204ENST00000441350 PLEKHG1Q9ULL1 1385 aa29.89■■■□□ 2.38
VPS13B-204ENST00000441350 NRXN3Q9Y4C0 1643 aa29.88■■■□□ 2.37
VPS13B-204ENST00000441350 CARD11Q9BXL7 1154 aa29.88■■■□□ 2.37
VPS13B-204ENST00000441350 ALKQ9UM73 1620 aa29.86■■■□□ 2.37
VPS13B-204ENST00000441350 ADGRB1O14514 1584 aa29.85■■■□□ 2.37
VPS13B-204ENST00000441350 ANKLE2Q86XL3 938 aa29.84■■■□□ 2.37
VPS13B-204ENST00000441350 IQGAP1P46940 1657 aa29.84■■■□□ 2.37
VPS13B-204ENST00000441350 LMTK3Q96Q04 1460 aa29.84■■■□□ 2.37
VPS13B-204ENST00000441350 SETD1AO15047 1707 aaKnown RBP29.83■■■□□ 2.37
VPS13B-204ENST00000441350 SENP3Q9H4L4 574 aaPredicted RBP29.82■■■□□ 2.36
VPS13B-204ENST00000441350 EIF4G2P78344 907 aaKnown RBP eCLIP29.82■■■□□ 2.368e-7■■■□□ 16.1
VPS13B-204ENST00000441350 USP47Q96K76 1375 aa29.81■■■□□ 2.36
VPS13B-204ENST00000441350 ASXL1Q8IXJ9 1541 aa29.8■■■□□ 2.36
VPS13B-204ENST00000441350 ADAMTS13Q76LX8 1427 aa29.8■■■□□ 2.36
VPS13B-204ENST00000441350 HSPA5P11021 654 aaKnown RBP29.78■■■□□ 2.36
VPS13B-204ENST00000441350 MED14O60244 1454 aa29.78■■■□□ 2.36
VPS13B-204ENST00000441350 TMEM132EQ6IEE7 984 aa29.78■■■□□ 2.36
VPS13B-204ENST00000441350 POLR1AO95602 1720 aaPredicted RBP29.77■■■□□ 2.36
VPS13B-204ENST00000441350 BCANQ96GW7 911 aa29.75■■■□□ 2.35
VPS13B-204ENST00000441350 DIP2AQ14689 1571 aa29.73■■■□□ 2.35
VPS13B-204ENST00000441350 ZNF316A6NFI3 1004 aaPredicted RBP29.72■■■□□ 2.35
VPS13B-204ENST00000441350 HSPA2P54652 639 aa29.72■■■□□ 2.35
VPS13B-204ENST00000441350 HIRIP3Q9BW71 556 aaPredicted RBP29.71■■■□□ 2.35
VPS13B-204ENST00000441350 TBX22Q9Y458 520 aa29.71■■■□□ 2.35
VPS13B-204ENST00000441350 METP08581 1390 aa29.71■■■□□ 2.35
VPS13B-204ENST00000441350 NCKAP5LQ9HCH0 1330 aa29.7■■■□□ 2.35
VPS13B-204ENST00000441350 NPHP4O75161 1426 aaPredicted RBP29.7■■■□□ 2.34
VPS13B-204ENST00000441350 SLC26A8Q96RN1 970 aa29.69■■■□□ 2.34
VPS13B-204ENST00000441350 YTHDC2Q9H6S0 1430 aaKnown RBP29.69■■■□□ 2.34
VPS13B-204ENST00000441350 ST20-MTHFSA0A0A6YYL1 179 aa29.67■■■□□ 2.34
VPS13B-204ENST00000441350 LRPPRCP42704 1394 aaKnown RBP29.66■■■□□ 2.34
VPS13B-204ENST00000441350 EIF3AQ14152 1382 aaKnown RBP29.66■■■□□ 2.34
VPS13B-204ENST00000441350 TRAK1Q9UPV9 953 aa29.64■■■□□ 2.34
VPS13B-204ENST00000441350 ARHGEF28Q8N1W1 1705 aaKnown RBP29.63■■■□□ 2.33
VPS13B-204ENST00000441350 ABCC11Q96J66 1382 aa29.63■■■□□ 2.33
VPS13B-204ENST00000441350 STK26Q9P289 416 aa29.62■■■□□ 2.33
VPS13B-204ENST00000441350 STRCQ7RTU9 1775 aa29.61■■■□□ 2.33
VPS13B-204ENST00000441350 PIK3R4Q99570 1358 aa29.6■■■□□ 2.33
VPS13B-204ENST00000441350 DLC1Q96QB1 1528 aa29.6■■■□□ 2.33
VPS13B-204ENST00000441350 KNDC1Q76NI1 1749 aa29.59■■■□□ 2.33
VPS13B-204ENST00000441350 TECPR2O15040 1411 aa29.59■■■□□ 2.33
VPS13B-204ENST00000441350 TESK2Q96S53 571 aa29.59■■■□□ 2.33
VPS13B-204ENST00000441350 PTPRUQ92729 1446 aa29.58■■■□□ 2.33
VPS13B-204ENST00000441350 CENPJQ9HC77 1338 aaPredicted RBP29.55■■■□□ 2.32
VPS13B-204ENST00000441350 SIRT1Q96EB6 747 aa29.54■■■□□ 2.32
VPS13B-204ENST00000441350 CPS1P31327 1500 aa29.54■■■□□ 2.32
VPS13B-204ENST00000441350 SBNO2Q9Y2G9 1366 aa29.53■■■□□ 2.32
VPS13B-204ENST00000441350 XRN1Q8IZH2 1706 aaKnown RBP29.53■■■□□ 2.32
VPS13B-204ENST00000441350 CHD2O14647 1828 aaKnown RBP29.52■■■□□ 2.32
VPS13B-204ENST00000441350 C11orf95C9JLR9 678 aaPredicted RBP29.52■■■□□ 2.32
VPS13B-204ENST00000441350 AMOTL2Q9Y2J4 779 aa29.52■■■□□ 2.32
VPS13B-204ENST00000441350 QRICH2Q9H0J4 1663 aa29.52■■■□□ 2.32
VPS13B-204ENST00000441350 FAM135BQ49AJ0 1406 aa29.51■■■□□ 2.32
VPS13B-204ENST00000441350 PRAM1Q96QH2 718 aa29.5■■■□□ 2.31
VPS13B-204ENST00000441350 ROBO2Q9HCK4 1378 aa29.48■■■□□ 2.31
VPS13B-204ENST00000441350 PTCH1Q13635 1447 aa29.46■■■□□ 2.31
VPS13B-204ENST00000441350 SLC24A1O60721 1099 aa29.46■■■□□ 2.31
VPS13B-204ENST00000441350 POGKQ9P215 609 aa29.46■■■□□ 2.31
VPS13B-204ENST00000441350 WASHC2AQ641Q2 1341 aa29.46■■■□□ 2.31
VPS13B-204ENST00000441350 PLEKHH1Q9ULM0 1364 aa29.45■■■□□ 2.31
VPS13B-204ENST00000441350 WAPLQ7Z5K2 1190 aa29.45■■■□□ 2.3
VPS13B-204ENST00000441350 CCDC7Q96M83 1385 aa29.44■■■□□ 2.3
VPS13B-204ENST00000441350 TMF1P82094 1093 aa29.44■■■□□ 2.3
VPS13B-204ENST00000441350 KIF7Q2M1P5 1343 aa29.44■■■□□ 2.3
VPS13B-204ENST00000441350 DISP3Q9P2K9 1392 aa29.44■■■□□ 2.3
VPS13B-204ENST00000441350 NWD1Q149M9 1564 aa29.43■■■□□ 2.3
VPS13B-204ENST00000441350 KCNA6P17658 529 aa29.43■■■□□ 2.3
VPS13B-204ENST00000441350 SAFB2Q14151 953 aaKnown RBP eCLIP29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms