RNA–Protein interactions for RNA: ENST00000441298.5

ZNF3-209, Transcript of zinc finger protein 3, humanhuman

TSL 4

Gene ZNF3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-209ENST00000441298 RIMS2Q9UQ26 1411 aa19.24■□□□□ 0.67
ZNF3-209ENST00000441298 SLC26A8Q96RN1 970 aa19.23■□□□□ 0.67
ZNF3-209ENST00000441298 PIP4K2BP78356 416 aa19.21■□□□□ 0.67
ZNF3-209ENST00000441298 NUTM2DQ5VT03 806 aaPredicted RBP19.21■□□□□ 0.67
ZNF3-209ENST00000441298 ZFYVE9O95405 1425 aa19.2■□□□□ 0.66
ZNF3-209ENST00000441298 LRRC7Q96NW7 1537 aa19.2■□□□□ 0.66
ZNF3-209ENST00000441298 HDGFP51858 240 aaKnown RBP19.17■□□□□ 0.66
ZNF3-209ENST00000441298 CLTCL1P53675 1640 aa19.17■□□□□ 0.66
ZNF3-209ENST00000441298 TOM1O60784 492 aa19.16■□□□□ 0.66
ZNF3-209ENST00000441298 ZNF326Q5BKZ1 582 aaKnown RBP19.16■□□□□ 0.66
ZNF3-209ENST00000441298 SLC4A1APQ9BWU0 796 aaKnown RBP19.16■□□□□ 0.66
ZNF3-209ENST00000441298 PLEKHG1Q9ULL1 1385 aa19.16■□□□□ 0.66
ZNF3-209ENST00000441298 TRPM2O94759 1503 aa19.15■□□□□ 0.66
ZNF3-209ENST00000441298 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.14■□□□□ 0.65
ZNF3-209ENST00000441298 KIF1BO60333 1816 aa19.11■□□□□ 0.65
ZNF3-209ENST00000441298 XIRP1Q702N8 1843 aaKnown RBP19.11■□□□□ 0.65
ZNF3-209ENST00000441298 RBM33Q96EV2 1170 aaKnown RBP19.11■□□□□ 0.65
ZNF3-209ENST00000441298 NWD1Q149M9 1564 aa19.1■□□□□ 0.65
ZNF3-209ENST00000441298 KCNA6P17658 529 aa19.1■□□□□ 0.65
ZNF3-209ENST00000441298 FOXD1Q16676 465 aa19.1■□□□□ 0.65
ZNF3-209ENST00000441298 TMEM94Q12767 1356 aa19.09■□□□□ 0.65
ZNF3-209ENST00000441298 PROSER2Q86WR7 435 aaPredicted RBP19.09■□□□□ 0.65
ZNF3-209ENST00000441298 ALKQ9UM73 1620 aa19.09■□□□□ 0.65
ZNF3-209ENST00000441298 NKTRP30414 1462 aaKnown RBP19.08■□□□□ 0.64
ZNF3-209ENST00000441298 DIP2AQ14689 1571 aa19.07■□□□□ 0.64
ZNF3-209ENST00000441298 ADAMTS13Q76LX8 1427 aa19.07■□□□□ 0.64
ZNF3-209ENST00000441298 CHD2O14647 1828 aaKnown RBP19.05■□□□□ 0.64
ZNF3-209ENST00000441298 SETD5Q9C0A6 1442 aa19.05■□□□□ 0.64
ZNF3-209ENST00000441298 NEXMIFQ5QGS0 1516 aa19.05■□□□□ 0.64
ZNF3-209ENST00000441298 HSPA1LP34931 641 aa19.04■□□□□ 0.64
ZNF3-209ENST00000441298 TBX22Q9Y458 520 aa19.03■□□□□ 0.64
ZNF3-209ENST00000441298 DISP3Q9P2K9 1392 aa19.03■□□□□ 0.64
ZNF3-209ENST00000441298 NRXN3Q9Y4C0 1643 aa19.03■□□□□ 0.64
ZNF3-209ENST00000441298 MPHOSPH9Q99550 1183 aa19.02■□□□□ 0.64
ZNF3-209ENST00000441298 SETBP1Q9Y6X0 1596 aa19.02■□□□□ 0.63
ZNF3-209ENST00000441298 C14orf37Q86TY3 774 aa19.01■□□□□ 0.63
ZNF3-209ENST00000441298 RAB3GAP2Q9H2M9 1393 aa19.01■□□□□ 0.63
ZNF3-209ENST00000441298 CCDC144AA2RUR9 1427 aa19■□□□□ 0.63
ZNF3-209ENST00000441298 MSH6P52701 1360 aa19■□□□□ 0.63
ZNF3-209ENST00000441298 PIK3R4Q99570 1358 aa18.97■□□□□ 0.63
ZNF3-209ENST00000441298 AMOTL2Q9Y2J4 779 aa18.96■□□□□ 0.63
ZNF3-209ENST00000441298 PTPRUQ92729 1446 aa18.96■□□□□ 0.63
ZNF3-209ENST00000441298 PPLO60437 1756 aa18.96■□□□□ 0.63
ZNF3-209ENST00000441298 METP08581 1390 aa18.94■□□□□ 0.62
ZNF3-209ENST00000441298 RGL3Q3MIN7 710 aa18.94■□□□□ 0.62
ZNF3-209ENST00000441298 XRN1Q8IZH2 1706 aaKnown RBP18.94■□□□□ 0.62
ZNF3-209ENST00000441298 ROBO1Q9Y6N7 1651 aa18.93■□□□□ 0.62
ZNF3-209ENST00000441298 VGFO15240 615 aaPredicted RBP18.92■□□□□ 0.62
ZNF3-209ENST00000441298 ACIN1Q9UKV3 1341 aaKnown RBP18.91■□□□□ 0.62
ZNF3-209ENST00000441298 RPGRIP1LQ68CZ1 1315 aa18.9■□□□□ 0.62
ZNF3-209ENST00000441298 MED1Q15648 1581 aaPredicted RBP18.89■□□□□ 0.62
ZNF3-209ENST00000441298 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.89■□□□□ 0.61
ZNF3-209ENST00000441298 SETD1AO15047 1707 aaKnown RBP18.88■□□□□ 0.61
ZNF3-209ENST00000441298 FAM135BQ49AJ0 1406 aa18.88■□□□□ 0.61
ZNF3-209ENST00000441298 ATF3P18847 181 aa18.87■□□□□ 0.61
ZNF3-209ENST00000441298 SPATA31E1Q6ZUB1 1445 aa18.87■□□□□ 0.61
ZNF3-209ENST00000441298 NCOA3Q9Y6Q9 1424 aa18.87■□□□□ 0.61
ZNF3-209ENST00000441298 IFT172Q9UG01 1749 aa18.86■□□□□ 0.61
ZNF3-209ENST00000441298 SLAIN2Q9P270 581 aa18.86■□□□□ 0.61
ZNF3-209ENST00000441298 ADGRF5Q8IZF2 1346 aa18.85■□□□□ 0.61
ZNF3-209ENST00000441298 CADPS2Q86UW7 1296 aa18.85■□□□□ 0.61
ZNF3-209ENST00000441298 C19orf44Q9H6X5 657 aa18.84■□□□□ 0.61
ZNF3-209ENST00000441298 PHLPP1O60346 1717 aa18.83■□□□□ 0.61
ZNF3-209ENST00000441298 ANKRD30BQ9BXX2 1392 aa18.83■□□□□ 0.61
ZNF3-209ENST00000441298 NALCNQ8IZF0 1738 aa18.83■□□□□ 0.6
ZNF3-209ENST00000441298 PHF23Q9BUL5 403 aaPredicted RBP18.81■□□□□ 0.6
ZNF3-209ENST00000441298 ILDR2Q71H61 639 aa18.8■□□□□ 0.6
ZNF3-209ENST00000441298 PTCH1Q13635 1447 aa18.8■□□□□ 0.6
ZNF3-209ENST00000441298 ADGRL3Q9HAR2 1447 aa18.8■□□□□ 0.6
ZNF3-209ENST00000441298 ROBO2Q9HCK4 1378 aa18.8■□□□□ 0.6
ZNF3-209ENST00000441298 DCCP43146 1447 aa18.79■□□□□ 0.6
ZNF3-209ENST00000441298 STK26Q9P289 416 aa18.78■□□□□ 0.6
ZNF3-209ENST00000441298 PIK3C2GO75747 1445 aa18.77■□□□□ 0.6
ZNF3-209ENST00000441298 ASXL1Q8IXJ9 1541 aa18.75■□□□□ 0.59
ZNF3-209ENST00000441298 TMEM132EQ6IEE7 984 aa18.75■□□□□ 0.59
ZNF3-209ENST00000441298 MST1RQ04912 1400 aa18.74■□□□□ 0.59
ZNF3-209ENST00000441298 MYOM2P54296 1465 aa18.74■□□□□ 0.59
ZNF3-209ENST00000441298 COL16A1Q07092 1604 aaPredicted RBP18.74■□□□□ 0.59
ZNF3-209ENST00000441298 HRCP23327 699 aa18.73■□□□□ 0.59
ZNF3-209ENST00000441298 BRINP3Q76B58 766 aa18.73■□□□□ 0.59
ZNF3-209ENST00000441298 AHDC1Q5TGY3 1603 aaPredicted RBP18.72■□□□□ 0.59
ZNF3-209ENST00000441298 LAMC1P11047 1609 aa18.71■□□□□ 0.59
ZNF3-209ENST00000441298 KDM2AQ9Y2K7 1162 aa18.71■□□□□ 0.59
ZNF3-209ENST00000441298 PRAG1Q86YV5 1406 aa18.71■□□□□ 0.59
ZNF3-209ENST00000441298 LRPPRCP42704 1394 aaKnown RBP18.7■□□□□ 0.58
ZNF3-209ENST00000441298 KNDC1Q76NI1 1749 aa18.7■□□□□ 0.58
ZNF3-209ENST00000441298 JCADQ9P266 1359 aa18.69■□□□□ 0.58
ZNF3-209ENST00000441298 CFAP70Q5T0N1 1121 aa18.69■□□□□ 0.58
ZNF3-209ENST00000441298 NRXN1Q9ULB1 1477 aa18.69■□□□□ 0.58
ZNF3-209ENST00000441298 YTHDC2Q9H6S0 1430 aaKnown RBP18.68■□□□□ 0.58
ZNF3-209ENST00000441298 WAPLQ7Z5K2 1190 aa18.68■□□□□ 0.58
ZNF3-209ENST00000441298 DDX17Q92841 729 aaKnown RBP18.68■□□□□ 0.58
ZNF3-209ENST00000441298 C1orf167Q5SNV9 1468 aa18.68■□□□□ 0.58
ZNF3-209ENST00000441298 DCAF11Q8TEB1 546 aa18.67■□□□□ 0.58
ZNF3-209ENST00000441298 PLEKHH1Q9ULM0 1364 aa18.67■□□□□ 0.58
ZNF3-209ENST00000441298 TECPR2O15040 1411 aa18.66■□□□□ 0.58
ZNF3-209ENST00000441298 CDC42BPGQ6DT37 1551 aa18.66■□□□□ 0.58
ZNF3-209ENST00000441298 NHSL1Q5SYE7 1610 aa18.66■□□□□ 0.58
ZNF3-209ENST00000441298 C14orf93Q9H972 538 aaKnown RBP18.65■□□□□ 0.58
ZNF3-209ENST00000441298 DHX57Q6P158 1386 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 181.3 ms