RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 RPGRIP1LQ68CZ1 1315 aa21.58■■□□□ 1.05
PLOD3-205ENST00000440925 ADGRF5Q8IZF2 1346 aa21.58■■□□□ 1.05
PLOD3-205ENST00000440925 KDM2AQ9Y2K7 1162 aa21.58■■□□□ 1.05
PLOD3-205ENST00000440925 KDM5AP29375 1690 aaKnown RBP21.58■■□□□ 1.05
PLOD3-205ENST00000440925 RIMS2Q9UQ26 1411 aa21.57■■□□□ 1.04
PLOD3-205ENST00000440925 SLIT1O75093 1534 aa21.56■■□□□ 1.04
PLOD3-205ENST00000440925 NEXMIFQ5QGS0 1516 aa21.56■■□□□ 1.04
PLOD3-205ENST00000440925 NBPF8Q3BBV2 869 aa21.56■■□□□ 1.04
PLOD3-205ENST00000440925 NCKAP5LQ9HCH0 1330 aa21.55■■□□□ 1.04
PLOD3-205ENST00000440925 PPP1R15AO75807 674 aaPredicted RBP21.55■■□□□ 1.04
PLOD3-205ENST00000440925 TXNDC2Q86VQ3 553 aa21.55■■□□□ 1.04
PLOD3-205ENST00000440925 TIMELESSQ9UNS1 1208 aa21.54■■□□□ 1.04
PLOD3-205ENST00000440925 SENP3Q9H4L4 574 aaPredicted RBP21.52■■□□□ 1.04
PLOD3-205ENST00000440925 TONSLQ96HA7 1378 aa21.5■■□□□ 1.03
PLOD3-205ENST00000440925 IFT172Q9UG01 1749 aa21.49■■□□□ 1.03
PLOD3-205ENST00000440925 PPLO60437 1756 aa21.49■■□□□ 1.03
PLOD3-205ENST00000440925 VGFO15240 615 aaPredicted RBP21.49■■□□□ 1.03
PLOD3-205ENST00000440925 ANKLE2Q86XL3 938 aa21.49■■□□□ 1.03
PLOD3-205ENST00000440925 NRXN1Q9ULB1 1477 aa21.49■■□□□ 1.03
PLOD3-205ENST00000440925 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.48■■□□□ 1.03
PLOD3-205ENST00000440925 HDGFP51858 240 aaKnown RBP21.45■■□□□ 1.02
PLOD3-205ENST00000440925 CFAP70Q5T0N1 1121 aa21.45■■□□□ 1.02
PLOD3-205ENST00000440925 STAC3Q96MF2 364 aa21.45■■□□□ 1.02
PLOD3-205ENST00000440925 EID1Q9Y6B2 187 aa21.45■■□□□ 1.02
PLOD3-205ENST00000440925 STRCQ7RTU9 1775 aa21.45■■□□□ 1.02
PLOD3-205ENST00000440925 MYOM2P54296 1465 aa21.45■■□□□ 1.02
PLOD3-205ENST00000440925 C14orf93Q9H972 538 aaKnown RBP21.44■■□□□ 1.02
PLOD3-205ENST00000440925 SCAF11Q99590 1463 aaKnown RBP21.44■■□□□ 1.02
PLOD3-205ENST00000440925 NBPF1Q3BBV0 1214 aa21.43■■□□□ 1.02
PLOD3-205ENST00000440925 PLEKHG1Q9ULL1 1385 aa21.43■■□□□ 1.02
PLOD3-205ENST00000440925 ADAMTS13Q76LX8 1427 aa21.43■■□□□ 1.02
PLOD3-205ENST00000440925 PRAG1Q86YV5 1406 aa21.43■■□□□ 1.02
PLOD3-205ENST00000440925 MED14O60244 1454 aa21.43■■□□□ 1.02
PLOD3-205ENST00000440925 PIK3C2GO75747 1445 aa21.41■■□□□ 1.02
PLOD3-205ENST00000440925 SLC26A8Q96RN1 970 aa21.41■■□□□ 1.02
PLOD3-205ENST00000440925 NRXN3Q9Y4C0 1643 aa21.4■■□□□ 1.02
PLOD3-205ENST00000440925 NPHP4O75161 1426 aaPredicted RBP21.38■■□□□ 1.01
PLOD3-205ENST00000440925 TMEM132EQ6IEE7 984 aa21.38■■□□□ 1.01
PLOD3-205ENST00000440925 TBX22Q9Y458 520 aa21.38■■□□□ 1.01
PLOD3-205ENST00000440925 METP08581 1390 aa21.36■■□□□ 1.01
PLOD3-205ENST00000440925 ALKQ9UM73 1620 aa21.36■■□□□ 1.01
PLOD3-205ENST00000440925 SETBP1Q9Y6X0 1596 aa21.36■■□□□ 1.01
PLOD3-205ENST00000440925 PTPRUQ92729 1446 aa21.32■■□□□ 1
PLOD3-205ENST00000440925 IQGAP1P46940 1657 aa21.32■■□□□ 1
PLOD3-205ENST00000440925 BCANQ96GW7 911 aa21.32■■□□□ 1
PLOD3-205ENST00000440925 SETD1AO15047 1707 aaKnown RBP21.32■■□□□ 1
PLOD3-205ENST00000440925 ASXL1Q8IXJ9 1541 aa21.31■■□□□ 1
PLOD3-205ENST00000440925 POLR1AO95602 1720 aaPredicted RBP21.31■■□□□ 1
PLOD3-205ENST00000440925 ADGRB1O14514 1584 aa21.3■■□□□ 1
PLOD3-205ENST00000440925 ZEB1P37275 1124 aaPredicted RBP21.28■■□□□ 1
PLOD3-205ENST00000440925 TRPM1Q7Z4N2 1603 aa21.28■■□□□ 1
PLOD3-205ENST00000440925 GPRASP1Q5JY77 1395 aa21.27■■□□□ 1
PLOD3-205ENST00000440925 RALGAPBQ86X10 1494 aa21.25■□□□□ 0.99
PLOD3-205ENST00000440925 KIAA1210Q9ULL0 1709 aa21.24■□□□□ 0.99
PLOD3-205ENST00000440925 AMOTL2Q9Y2J4 779 aa21.24■□□□□ 0.99
PLOD3-205ENST00000440925 STK26Q9P289 416 aa21.23■□□□□ 0.99
PLOD3-205ENST00000440925 DMRT2Q9Y5R5 561 aa21.23■□□□□ 0.99
PLOD3-205ENST00000440925 KCNA6P17658 529 aa21.22■□□□□ 0.99
PLOD3-205ENST00000440925 LRPPRCP42704 1394 aaKnown RBP21.22■□□□□ 0.99
PLOD3-205ENST00000440925 YTHDC2Q9H6S0 1430 aaKnown RBP21.21■□□□□ 0.99
PLOD3-205ENST00000440925 ROCK2O75116 1388 aaKnown RBP21.21■□□□□ 0.99
PLOD3-205ENST00000440925 ABCC11Q96J66 1382 aa21.21■□□□□ 0.99
PLOD3-205ENST00000440925 CARD11Q9BXL7 1154 aa21.2■□□□□ 0.98
PLOD3-205ENST00000440925 TRAK1Q9UPV9 953 aa21.2■□□□□ 0.98
PLOD3-205ENST00000440925 ZNF335Q9H4Z2 1342 aaPredicted RBP21.2■□□□□ 0.98
PLOD3-205ENST00000440925 PIK3R4Q99570 1358 aa21.2■□□□□ 0.98
PLOD3-205ENST00000440925 DIP2AQ14689 1571 aa21.19■□□□□ 0.98
PLOD3-205ENST00000440925 STRCP1A6NGW2 1772 aa21.18■□□□□ 0.98
PLOD3-205ENST00000440925 WAPLQ7Z5K2 1190 aa21.18■□□□□ 0.98
PLOD3-205ENST00000440925 ROBO2Q9HCK4 1378 aa21.18■□□□□ 0.98
PLOD3-205ENST00000440925 CHD2O14647 1828 aaKnown RBP21.18■□□□□ 0.98
PLOD3-205ENST00000440925 SIRT1Q96EB6 747 aa21.17■□□□□ 0.98
PLOD3-205ENST00000440925 LAMC1P11047 1609 aa21.16■□□□□ 0.98
PLOD3-205ENST00000440925 PLEKHH1Q9ULM0 1364 aa21.16■□□□□ 0.98
PLOD3-205ENST00000440925 RBM33Q96EV2 1170 aaKnown RBP21.16■□□□□ 0.98
PLOD3-205ENST00000440925 TECPR2O15040 1411 aa21.14■□□□□ 0.98
PLOD3-205ENST00000440925 HIRIP3Q9BW71 556 aaPredicted RBP21.13■□□□□ 0.97
PLOD3-205ENST00000440925 XRN1Q8IZH2 1706 aaKnown RBP21.12■□□□□ 0.97
PLOD3-205ENST00000440925 HSPA5P11021 654 aaKnown RBP21.12■□□□□ 0.97
PLOD3-205ENST00000440925 ST20-MTHFSA0A0A6YYL1 179 aa21.11■□□□□ 0.97
PLOD3-205ENST00000440925 PRAM1Q96QH2 718 aa21.11■□□□□ 0.97
PLOD3-205ENST00000440925 NWD1Q149M9 1564 aa21.1■□□□□ 0.97
PLOD3-205ENST00000440925 TESK2Q96S53 571 aa21.1■□□□□ 0.97
PLOD3-205ENST00000440925 USP47Q96K76 1375 aa21.09■□□□□ 0.97
PLOD3-205ENST00000440925 DLC1Q96QB1 1528 aa21.09■□□□□ 0.97
PLOD3-205ENST00000440925 LTBP4Q8N2S1 1624 aa21.08■□□□□ 0.97
PLOD3-205ENST00000440925 PROSER2Q86WR7 435 aaPredicted RBP21.08■□□□□ 0.97
PLOD3-205ENST00000440925 FAM135BQ49AJ0 1406 aa21.07■□□□□ 0.96
PLOD3-205ENST00000440925 SAFB2Q14151 953 aaKnown RBP eCLIP21.07■□□□□ 0.96
PLOD3-205ENST00000440925 CPS1P31327 1500 aa21.06■□□□□ 0.96
PLOD3-205ENST00000440925 C11orf95C9JLR9 678 aaPredicted RBP21.06■□□□□ 0.96
PLOD3-205ENST00000440925 PTCH1Q13635 1447 aa21.05■□□□□ 0.96
PLOD3-205ENST00000440925 LRRC7Q96NW7 1537 aa21.05■□□□□ 0.96
PLOD3-205ENST00000440925 EIF4G2P78344 907 aaKnown RBP eCLIP21.05■□□□□ 0.96
PLOD3-205ENST00000440925 KNDC1Q76NI1 1749 aa21.04■□□□□ 0.96
PLOD3-205ENST00000440925 ARHGEF28Q8N1W1 1705 aaKnown RBP21.04■□□□□ 0.96
PLOD3-205ENST00000440925 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.04■□□□□ 0.96
PLOD3-205ENST00000440925 CENPJQ9HC77 1338 aaPredicted RBP21.04■□□□□ 0.96
PLOD3-205ENST00000440925 POGKQ9P215 609 aa21.03■□□□□ 0.96
PLOD3-205ENST00000440925 TMEM94Q12767 1356 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms