RNA–Protein interactions for RNA: ENST00000440702.5

FAM20B-202, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

TSL 3

Gene FAM20B, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-202ENST00000440702 KCNA6P17658 529 aa26.42■■□□□ 1.82
FAM20B-202ENST00000440702 PROSER2Q86WR7 435 aaPredicted RBP26.41■■□□□ 1.82
FAM20B-202ENST00000440702 NWD1Q149M9 1564 aa26.39■■□□□ 1.82
FAM20B-202ENST00000440702 TMEM131LA2VDJ0 1609 aa26.37■■□□□ 1.81
FAM20B-202ENST00000440702 PPP1R15AO75807 674 aaPredicted RBP26.37■■□□□ 1.81
FAM20B-202ENST00000440702 ZFYVE9O95405 1425 aa26.37■■□□□ 1.81
FAM20B-202ENST00000440702 RIMS2Q9UQ26 1411 aa26.37■■□□□ 1.81
FAM20B-202ENST00000440702 E9PCH4 1651 aa26.37■■□□□ 1.81
FAM20B-202ENST00000440702 ROBO1Q9Y6N7 1651 aa26.36■■□□□ 1.81
FAM20B-202ENST00000440702 CHGAP10645 457 aaKnown RBP26.36■■□□□ 1.81
FAM20B-202ENST00000440702 NKTRP30414 1462 aaKnown RBP26.36■■□□□ 1.81
FAM20B-202ENST00000440702 FAM135BQ49AJ0 1406 aa26.34■■□□□ 1.81
FAM20B-202ENST00000440702 ITGAEP38570 1179 aa26.34■■□□□ 1.81
FAM20B-202ENST00000440702 PLEKHG1Q9ULL1 1385 aa26.33■■□□□ 1.8
FAM20B-202ENST00000440702 PPARGC1BQ86YN6 1023 aaKnown RBP26.32■■□□□ 1.8
FAM20B-202ENST00000440702 IQGAP3Q86VI3 1631 aa26.32■■□□□ 1.8
FAM20B-202ENST00000440702 CHD2O14647 1828 aaKnown RBP26.31■■□□□ 1.8
FAM20B-202ENST00000440702 ROCK1Q13464 1354 aa26.31■■□□□ 1.8
FAM20B-202ENST00000440702 NUTM2DQ5VT03 806 aaPredicted RBP26.3■■□□□ 1.8
FAM20B-202ENST00000440702 MSH6P52701 1360 aa26.29■■□□□ 1.8
FAM20B-202ENST00000440702 HDGFP51858 240 aaKnown RBP26.26■■□□□ 1.79
FAM20B-202ENST00000440702 NUP155O75694 1391 aa26.25■■□□□ 1.79
FAM20B-202ENST00000440702 PHLPP1O60346 1717 aa26.22■■□□□ 1.79
FAM20B-202ENST00000440702 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.22■■□□□ 1.79
FAM20B-202ENST00000440702 RGS17Q9UGC6 210 aaPredicted RBP26.22■■□□□ 1.79
FAM20B-202ENST00000440702 ADAMTS13Q76LX8 1427 aa26.2■■□□□ 1.78
FAM20B-202ENST00000440702 C14orf37Q86TY3 774 aa26.19■■□□□ 1.78
FAM20B-202ENST00000440702 SLAIN2Q9P270 581 aa26.19■■□□□ 1.78
FAM20B-202ENST00000440702 TBX22Q9Y458 520 aa26.19■■□□□ 1.78
FAM20B-202ENST00000440702 DIP2AQ14689 1571 aa26.19■■□□□ 1.78
FAM20B-202ENST00000440702 SPHKAPQ2M3C7 1700 aa26.16■■□□□ 1.78
FAM20B-202ENST00000440702 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.13■■□□□ 1.77
FAM20B-202ENST00000440702 TRPM2O94759 1503 aa26.13■■□□□ 1.77
FAM20B-202ENST00000440702 POTEAQ6S8J7 498 aa26.1■■□□□ 1.77
FAM20B-202ENST00000440702 COL16A1Q07092 1604 aaPredicted RBP26.1■■□□□ 1.77
FAM20B-202ENST00000440702 PTPRUQ92729 1446 aa26.09■■□□□ 1.77
FAM20B-202ENST00000440702 NCOA3Q9Y6Q9 1424 aa26.09■■□□□ 1.77
FAM20B-202ENST00000440702 PIK3R4Q99570 1358 aa26.08■■□□□ 1.77
FAM20B-202ENST00000440702 JCADQ9P266 1359 aa26.07■■□□□ 1.76
FAM20B-202ENST00000440702 NRXN3Q9Y4C0 1643 aa26.07■■□□□ 1.76
FAM20B-202ENST00000440702 ZNF326Q5BKZ1 582 aaKnown RBP26.07■■□□□ 1.76
FAM20B-202ENST00000440702 AMOTL2Q9Y2J4 779 aa26.06■■□□□ 1.76
FAM20B-202ENST00000440702 ATF3P18847 181 aa26.05■■□□□ 1.76
FAM20B-202ENST00000440702 CLTCL1P53675 1640 aa26.03■■□□□ 1.76
FAM20B-202ENST00000440702 CADPS2Q86UW7 1296 aa26.03■■□□□ 1.76
FAM20B-202ENST00000440702 C19orf44Q9H6X5 657 aa26.03■■□□□ 1.76
FAM20B-202ENST00000440702 XRN1Q8IZH2 1706 aaKnown RBP26.02■■□□□ 1.76
FAM20B-202ENST00000440702 SETBP1Q9Y6X0 1596 aa26.02■■□□□ 1.76
FAM20B-202ENST00000440702 AHDC1Q5TGY3 1603 aaPredicted RBP26■■□□□ 1.75
FAM20B-202ENST00000440702 SETD1AO15047 1707 aaKnown RBP26■■□□□ 1.75
FAM20B-202ENST00000440702 RRBP1Q9P2E9 1410 aaKnown RBP25.98■■□□□ 1.75
FAM20B-202ENST00000440702 LRP6O75581 1613 aa25.98■■□□□ 1.75
FAM20B-202ENST00000440702 KIF1BO60333 1816 aa25.98■■□□□ 1.75
FAM20B-202ENST00000440702 NEXMIFQ5QGS0 1516 aa25.97■■□□□ 1.75
FAM20B-202ENST00000440702 METP08581 1390 aa25.96■■□□□ 1.75
FAM20B-202ENST00000440702 MEX3CQ5U5Q3 659 aaKnown RBP25.96■■□□□ 1.75
FAM20B-202ENST00000440702 NAIPQ13075 1403 aa25.96■■□□□ 1.75
FAM20B-202ENST00000440702 SHPRHQ149N8 1683 aa25.95■■□□□ 1.74
FAM20B-202ENST00000440702 BRINP3Q76B58 766 aa25.94■■□□□ 1.74
FAM20B-202ENST00000440702 DCCP43146 1447 aa25.92■■□□□ 1.74
FAM20B-202ENST00000440702 SPATA31A6Q5VVP1 1343 aa25.91■■□□□ 1.74
FAM20B-202ENST00000440702 TRIM52Q96A61 297 aa25.91■■□□□ 1.74
FAM20B-202ENST00000440702 ASXL1Q8IXJ9 1541 aa25.91■■□□□ 1.74
FAM20B-202ENST00000440702 NALCNQ8IZF0 1738 aa25.89■■□□□ 1.74
FAM20B-202ENST00000440702 MST1RQ04912 1400 aa25.88■■□□□ 1.73
FAM20B-202ENST00000440702 NUTM2BA6NNL0 878 aaPredicted RBP25.87■■□□□ 1.73
FAM20B-202ENST00000440702 NUTM2EB1AL46 878 aaPredicted RBP25.87■■□□□ 1.73
FAM20B-202ENST00000440702 NUTM2AQ8IVF1 878 aaPredicted RBP25.87■■□□□ 1.73
FAM20B-202ENST00000440702 ADGRL3Q9HAR2 1447 aa25.86■■□□□ 1.73
FAM20B-202ENST00000440702 NHSL1Q5SYE7 1610 aa25.85■■□□□ 1.73
FAM20B-202ENST00000440702 HFM1A2PYH4 1435 aa25.83■■□□□ 1.73
FAM20B-202ENST00000440702 DDX17Q92841 729 aaKnown RBP25.82■■□□□ 1.72
FAM20B-202ENST00000440702 ZNF772Q68DY9 489 aaPredicted RBP25.8■■□□□ 1.72
FAM20B-202ENST00000440702 SLC4A1APQ9BWU0 796 aaKnown RBP25.8■■□□□ 1.72
FAM20B-202ENST00000440702 PPLO60437 1756 aa25.78■■□□□ 1.72
FAM20B-202ENST00000440702 SETD5Q9C0A6 1442 aa25.78■■□□□ 1.72
FAM20B-202ENST00000440702 VGFO15240 615 aaPredicted RBP25.76■■□□□ 1.71
FAM20B-202ENST00000440702 PTCH1Q13635 1447 aa25.75■■□□□ 1.71
FAM20B-202ENST00000440702 ROBO2Q9HCK4 1378 aa25.75■■□□□ 1.71
FAM20B-202ENST00000440702 FOXD1Q16676 465 aa25.75■■□□□ 1.71
FAM20B-202ENST00000440702 C1orf167Q5SNV9 1468 aa25.73■■□□□ 1.71
FAM20B-202ENST00000440702 AFF2P51816 1311 aa25.73■■□□□ 1.71
FAM20B-202ENST00000440702 LRRC59Q96AG4 307 aaKnown RBP25.73■■□□□ 1.71
FAM20B-202ENST00000440702 PNPLA6Q8IY17 1366 aa25.71■■□□□ 1.71
FAM20B-202ENST00000440702 RPGRIP1LQ68CZ1 1315 aa25.7■■□□□ 1.71
FAM20B-202ENST00000440702 RXRBP28702 533 aa25.69■■□□□ 1.7
FAM20B-202ENST00000440702 C8orf37Q96NL8 207 aa25.68■■□□□ 1.7
FAM20B-202ENST00000440702 ORAI2Q96SN7 254 aa25.67■■□□□ 1.7
FAM20B-202ENST00000440702 LAMC1P11047 1609 aa25.64■■□□□ 1.7
FAM20B-202ENST00000440702 CCDC144AA2RUR9 1427 aa25.63■■□□□ 1.69
FAM20B-202ENST00000440702 PRAG1Q86YV5 1406 aa25.63■■□□□ 1.69
FAM20B-202ENST00000440702 ADAMTS2O95450 1211 aa25.63■■□□□ 1.69
FAM20B-202ENST00000440702 RGL3Q3MIN7 710 aa25.63■■□□□ 1.69
FAM20B-202ENST00000440702 UPF1Q92900 1129 aaKnown RBP eCLIP25.63■■□□□ 1.69
FAM20B-202ENST00000440702 ADGRF5Q8IZF2 1346 aa25.63■■□□□ 1.69
FAM20B-202ENST00000440702 IFT172Q9UG01 1749 aa25.6■■□□□ 1.69
FAM20B-202ENST00000440702 CDK12Q9NYV4 1490 aaPredicted RBP25.6■■□□□ 1.69
FAM20B-202ENST00000440702 STK26Q9P289 416 aa25.59■■□□□ 1.69
FAM20B-202ENST00000440702 CDC42BPGQ6DT37 1551 aa25.58■■□□□ 1.69
FAM20B-202ENST00000440702 QTRT2Q9H974 415 aaKnown RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms