RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 KIF1BO60333 1816 aa21.15■□□□□ 0.98
TNFRSF1A-204ENST00000440083 NPHP4O75161 1426 aaPredicted RBP21.15■□□□□ 0.98
TNFRSF1A-204ENST00000440083 SENP3Q9H4L4 574 aaPredicted RBP21.15■□□□□ 0.98
TNFRSF1A-204ENST00000440083 CCDC144AA2RUR9 1427 aa21.14■□□□□ 0.98
TNFRSF1A-204ENST00000440083 NUTM2DQ5VT03 806 aaPredicted RBP21.14■□□□□ 0.97
TNFRSF1A-204ENST00000440083 IQGAP1P46940 1657 aa21.14■□□□□ 0.97
TNFRSF1A-204ENST00000440083 MED14O60244 1454 aa21.13■□□□□ 0.97
TNFRSF1A-204ENST00000440083 DMRT2Q9Y5R5 561 aa21.13■□□□□ 0.97
TNFRSF1A-204ENST00000440083 EID1Q9Y6B2 187 aa21.12■□□□□ 0.97
TNFRSF1A-204ENST00000440083 ANKRD30BQ9BXX2 1392 aa21.11■□□□□ 0.97
TNFRSF1A-204ENST00000440083 ZNF326Q5BKZ1 582 aaKnown RBP21.1■□□□□ 0.97
TNFRSF1A-204ENST00000440083 NEXMIFQ5QGS0 1516 aa21.09■□□□□ 0.97
TNFRSF1A-204ENST00000440083 SPATA31E1Q6ZUB1 1445 aa21.07■□□□□ 0.96
TNFRSF1A-204ENST00000440083 PPP1R15AO75807 674 aaPredicted RBP21.07■□□□□ 0.96
TNFRSF1A-204ENST00000440083 ZNF335Q9H4Z2 1342 aaPredicted RBP21.05■□□□□ 0.96
TNFRSF1A-204ENST00000440083 PLEKHG1Q9ULL1 1385 aa21.03■□□□□ 0.96
TNFRSF1A-204ENST00000440083 RGL3Q3MIN7 710 aa21.03■□□□□ 0.96
TNFRSF1A-204ENST00000440083 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.03■□□□□ 0.96
TNFRSF1A-204ENST00000440083 BCANQ96GW7 911 aa21.02■□□□□ 0.96
TNFRSF1A-204ENST00000440083 SLC26A8Q96RN1 970 aa21.02■□□□□ 0.96
TNFRSF1A-204ENST00000440083 PPLO60437 1756 aa21.02■□□□□ 0.96
TNFRSF1A-204ENST00000440083 LTBP4Q8N2S1 1624 aa21.01■□□□□ 0.95
TNFRSF1A-204ENST00000440083 NRXN3Q9Y4C0 1643 aa21■□□□□ 0.95
TNFRSF1A-204ENST00000440083 HDGFP51858 240 aaKnown RBP20.99■□□□□ 0.95
TNFRSF1A-204ENST00000440083 IFT172Q9UG01 1749 aa20.98■□□□□ 0.95
TNFRSF1A-204ENST00000440083 STRCP1A6NGW2 1772 aa20.98■□□□□ 0.95
TNFRSF1A-204ENST00000440083 ADAMTS13Q76LX8 1427 aa20.98■□□□□ 0.95
TNFRSF1A-204ENST00000440083 SETBP1Q9Y6X0 1596 aa20.96■□□□□ 0.95
TNFRSF1A-204ENST00000440083 RPGRIP1LQ68CZ1 1315 aa20.95■□□□□ 0.94
TNFRSF1A-204ENST00000440083 ADGRF5Q8IZF2 1346 aa20.93■□□□□ 0.94
TNFRSF1A-204ENST00000440083 SIN3AQ96ST3 1273 aa20.92■□□□□ 0.94
TNFRSF1A-204ENST00000440083 DIP2AQ14689 1571 aa20.92■□□□□ 0.94
TNFRSF1A-204ENST00000440083 VGFO15240 615 aaPredicted RBP20.9■□□□□ 0.94
TNFRSF1A-204ENST00000440083 CERKQ8TCT0 537 aa20.89■□□□□ 0.93
TNFRSF1A-204ENST00000440083 TBX22Q9Y458 520 aa20.89■□□□□ 0.93
TNFRSF1A-204ENST00000440083 SETD1AO15047 1707 aaKnown RBP20.89■□□□□ 0.93
TNFRSF1A-204ENST00000440083 NWD1Q149M9 1564 aa20.89■□□□□ 0.93
TNFRSF1A-204ENST00000440083 CPS1P31327 1500 aa20.88■□□□□ 0.93
TNFRSF1A-204ENST00000440083 MYOM2P54296 1465 aa20.88■□□□□ 0.93
TNFRSF1A-204ENST00000440083 METP08581 1390 aa20.87■□□□□ 0.93
TNFRSF1A-204ENST00000440083 ALKQ9UM73 1620 aa20.87■□□□□ 0.93
TNFRSF1A-204ENST00000440083 NEUROD1Q13562 356 aa20.87■□□□□ 0.93
TNFRSF1A-204ENST00000440083 PTPRUQ92729 1446 aa20.87■□□□□ 0.93
TNFRSF1A-204ENST00000440083 CHD2O14647 1828 aaKnown RBP20.86■□□□□ 0.93
TNFRSF1A-204ENST00000440083 PIK3C2GO75747 1445 aa20.86■□□□□ 0.93
TNFRSF1A-204ENST00000440083 LRRC7Q96NW7 1537 aa20.85■□□□□ 0.93
TNFRSF1A-204ENST00000440083 KCNA6P17658 529 aa20.85■□□□□ 0.93
TNFRSF1A-204ENST00000440083 TIMELESSQ9UNS1 1208 aa20.85■□□□□ 0.93
TNFRSF1A-204ENST00000440083 NRXN1Q9ULB1 1477 aa20.85■□□□□ 0.93
TNFRSF1A-204ENST00000440083 KDM2AQ9Y2K7 1162 aa20.84■□□□□ 0.93
TNFRSF1A-204ENST00000440083 DCAF11Q8TEB1 546 aa20.83■□□□□ 0.93
TNFRSF1A-204ENST00000440083 TONSLQ96HA7 1378 aa20.83■□□□□ 0.92
TNFRSF1A-204ENST00000440083 ZNF316A6NFI3 1004 aaPredicted RBP20.82■□□□□ 0.92
TNFRSF1A-204ENST00000440083 RBM33Q96EV2 1170 aaKnown RBP20.82■□□□□ 0.92
TNFRSF1A-204ENST00000440083 ASXL1Q8IXJ9 1541 aa20.82■□□□□ 0.92
TNFRSF1A-204ENST00000440083 XRN1Q8IZH2 1706 aaKnown RBP20.81■□□□□ 0.92
TNFRSF1A-204ENST00000440083 PIK3R4Q99570 1358 aa20.81■□□□□ 0.92
TNFRSF1A-204ENST00000440083 NKTRP30414 1462 aaKnown RBP20.81■□□□□ 0.92
TNFRSF1A-204ENST00000440083 XIRP1Q702N8 1843 aaKnown RBP20.81■□□□□ 0.92
TNFRSF1A-204ENST00000440083 AMOTL2Q9Y2J4 779 aa20.79■□□□□ 0.92
TNFRSF1A-204ENST00000440083 TMEM94Q12767 1356 aa20.77■□□□□ 0.92
TNFRSF1A-204ENST00000440083 CFAP70Q5T0N1 1121 aa20.77■□□□□ 0.92
TNFRSF1A-204ENST00000440083 PROSER2Q86WR7 435 aaPredicted RBP20.77■□□□□ 0.92
TNFRSF1A-204ENST00000440083 L3MBTL2Q969R5 705 aa20.77■□□□□ 0.92
TNFRSF1A-204ENST00000440083 IQSEC2Q5JU85 1478 aa20.76■□□□□ 0.91
TNFRSF1A-204ENST00000440083 TMEM132EQ6IEE7 984 aa20.76■□□□□ 0.91
TNFRSF1A-204ENST00000440083 C14orf93Q9H972 538 aaKnown RBP20.74■□□□□ 0.91
TNFRSF1A-204ENST00000440083 LAMC1P11047 1609 aa20.74■□□□□ 0.91
TNFRSF1A-204ENST00000440083 PRAG1Q86YV5 1406 aa20.72■□□□□ 0.91
TNFRSF1A-204ENST00000440083 ROBO2Q9HCK4 1378 aa20.72■□□□□ 0.91
TNFRSF1A-204ENST00000440083 STK26Q9P289 416 aa20.71■□□□□ 0.91
TNFRSF1A-204ENST00000440083 ADGRB1O14514 1584 aa20.7■□□□□ 0.9
TNFRSF1A-204ENST00000440083 LRPPRCP42704 1394 aaKnown RBP20.69■□□□□ 0.9
TNFRSF1A-204ENST00000440083 PTCH1Q13635 1447 aa20.69■□□□□ 0.9
TNFRSF1A-204ENST00000440083 YTHDC2Q9H6S0 1430 aaKnown RBP20.69■□□□□ 0.9
TNFRSF1A-204ENST00000440083 UBAP1LF5GYI3 381 aa20.68■□□□□ 0.9
TNFRSF1A-204ENST00000440083 STAC3Q96MF2 364 aa20.68■□□□□ 0.9
TNFRSF1A-204ENST00000440083 FBXO41Q8TF61 875 aa20.67■□□□□ 0.9
TNFRSF1A-204ENST00000440083 KNDC1Q76NI1 1749 aa20.67■□□□□ 0.9
TNFRSF1A-204ENST00000440083 TECPR2O15040 1411 aa20.65■□□□□ 0.9
TNFRSF1A-204ENST00000440083 C14orf37Q86TY3 774 aa20.65■□□□□ 0.9
TNFRSF1A-204ENST00000440083 NALCNQ8IZF0 1738 aa20.64■□□□□ 0.9
TNFRSF1A-204ENST00000440083 PLEKHH1Q9ULM0 1364 aa20.64■□□□□ 0.89
TNFRSF1A-204ENST00000440083 KIAA1210Q9ULL0 1709 aa20.64■□□□□ 0.89
TNFRSF1A-204ENST00000440083 ABCC11Q96J66 1382 aa20.63■□□□□ 0.89
TNFRSF1A-204ENST00000440083 NBPF1Q3BBV0 1214 aa20.63■□□□□ 0.89
TNFRSF1A-204ENST00000440083 DIEXFQ68CQ4 756 aaKnown RBP20.63■□□□□ 0.89
TNFRSF1A-204ENST00000440083 MSH6P52701 1360 aa20.62■□□□□ 0.89
TNFRSF1A-204ENST00000440083 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.62■□□□□ 0.89
TNFRSF1A-204ENST00000440083 NBPF8Q3BBV2 869 aa20.62■□□□□ 0.89
TNFRSF1A-204ENST00000440083 WAPLQ7Z5K2 1190 aa20.62■□□□□ 0.89
TNFRSF1A-204ENST00000440083 TRPM1Q7Z4N2 1603 aa20.61■□□□□ 0.89
TNFRSF1A-204ENST00000440083 PIP4K2BP78356 416 aa20.61■□□□□ 0.89
TNFRSF1A-204ENST00000440083 ADGRL3Q9HAR2 1447 aa20.61■□□□□ 0.89
TNFRSF1A-204ENST00000440083 NCOA3Q9Y6Q9 1424 aa20.61■□□□□ 0.89
TNFRSF1A-204ENST00000440083 SCAF1Q9H7N4 1312 aaKnown RBP20.59■□□□□ 0.89
TNFRSF1A-204ENST00000440083 TRAK1Q9UPV9 953 aa20.59■□□□□ 0.89
TNFRSF1A-204ENST00000440083 TOM1O60784 492 aa20.58■□□□□ 0.89
TNFRSF1A-204ENST00000440083 DLC1Q96QB1 1528 aa20.58■□□□□ 0.88
TNFRSF1A-204ENST00000440083 ARHGEF28Q8N1W1 1705 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms