RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 RIMS2Q9UQ26 1411 aa31.25■■■□□ 2.59
VIL1-204ENST00000440053 HFM1A2PYH4 1435 aa31.25■■■□□ 2.59
VIL1-204ENST00000440053 ZFYVE9O95405 1425 aa31.25■■■□□ 2.59
VIL1-204ENST00000440053 SCAF1Q9H7N4 1312 aaKnown RBP31.24■■■□□ 2.59
VIL1-204ENST00000440053 TOM1O60784 492 aa31.23■■■□□ 2.59
VIL1-204ENST00000440053 PPP1R15AO75807 674 aaPredicted RBP31.22■■■□□ 2.59
VIL1-204ENST00000440053 HDGFP51858 240 aaKnown RBP31.2■■■□□ 2.58
VIL1-204ENST00000440053 KCNA6P17658 529 aa31.18■■■□□ 2.58
VIL1-204ENST00000440053 RBM33Q96EV2 1170 aaKnown RBP31.18■■■□□ 2.58
VIL1-204ENST00000440053 PLEKHG1Q9ULL1 1385 aa31.16■■■□□ 2.58
VIL1-204ENST00000440053 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.15■■■□□ 2.58
VIL1-204ENST00000440053 ALKQ9UM73 1620 aa31.14■■■□□ 2.58
VIL1-204ENST00000440053 SLC4A1APQ9BWU0 796 aaKnown RBP31.13■■■□□ 2.57
VIL1-204ENST00000440053 HSPA1LP34931 641 aa31.11■■■□□ 2.57
VIL1-204ENST00000440053 PROSER2Q86WR7 435 aaPredicted RBP31.11■■■□□ 2.57
VIL1-204ENST00000440053 SPHKAPQ2M3C7 1700 aa31.11■■■□□ 2.57
VIL1-204ENST00000440053 ZNF326Q5BKZ1 582 aaKnown RBP31.1■■■□□ 2.57
VIL1-204ENST00000440053 FOXD1Q16676 465 aa31.08■■■□□ 2.57
VIL1-204ENST00000440053 TMEM94Q12767 1356 aa31.08■■■□□ 2.57
VIL1-204ENST00000440053 TBX22Q9Y458 520 aa31.08■■■□□ 2.57
VIL1-204ENST00000440053 ADAMTS13Q76LX8 1427 aa31.04■■■□□ 2.56
VIL1-204ENST00000440053 XIRP1Q702N8 1843 aaKnown RBP31.04■■■□□ 2.56
VIL1-204ENST00000440053 CLTCL1P53675 1640 aa31.04■■■□□ 2.56
VIL1-204ENST00000440053 TRPM2O94759 1503 aa31.01■■■□□ 2.55
VIL1-204ENST00000440053 DISP3Q9P2K9 1392 aa30.99■■■□□ 2.55
VIL1-204ENST00000440053 MPHOSPH9Q99550 1183 aa30.97■■■□□ 2.55
VIL1-204ENST00000440053 NWD1Q149M9 1564 aa30.96■■■□□ 2.55
VIL1-204ENST00000440053 CHD2O14647 1828 aaKnown RBP30.94■■■□□ 2.54
VIL1-204ENST00000440053 NKTRP30414 1462 aaKnown RBP30.93■■■□□ 2.54
VIL1-204ENST00000440053 SETD5Q9C0A6 1442 aa30.92■■■□□ 2.54
VIL1-204ENST00000440053 AMOTL2Q9Y2J4 779 aa30.92■■■□□ 2.54
VIL1-204ENST00000440053 PTPRUQ92729 1446 aa30.91■■■□□ 2.54
VIL1-204ENST00000440053 NEXMIFQ5QGS0 1516 aa30.88■■■□□ 2.53
VIL1-204ENST00000440053 PIK3R4Q99570 1358 aa30.87■■■□□ 2.53
VIL1-204ENST00000440053 NRXN3Q9Y4C0 1643 aa30.87■■■□□ 2.53
VIL1-204ENST00000440053 KIF1BO60333 1816 aa30.87■■■□□ 2.53
VIL1-204ENST00000440053 METP08581 1390 aa30.86■■■□□ 2.53
VIL1-204ENST00000440053 DIP2AQ14689 1571 aa30.86■■■□□ 2.53
VIL1-204ENST00000440053 MSH6P52701 1360 aa30.85■■■□□ 2.53
VIL1-204ENST00000440053 ILDR2Q71H61 639 aa30.84■■■□□ 2.53
VIL1-204ENST00000440053 C14orf37Q86TY3 774 aa30.83■■■□□ 2.53
VIL1-204ENST00000440053 SETBP1Q9Y6X0 1596 aa30.83■■■□□ 2.53
VIL1-204ENST00000440053 RAB3GAP2Q9H2M9 1393 aa30.83■■■□□ 2.53
VIL1-204ENST00000440053 RGL3Q3MIN7 710 aa30.82■■■□□ 2.52
VIL1-204ENST00000440053 VGFO15240 615 aaPredicted RBP30.81■■■□□ 2.52
VIL1-204ENST00000440053 SLAIN2Q9P270 581 aa30.81■■■□□ 2.52
VIL1-204ENST00000440053 FAM135BQ49AJ0 1406 aa30.81■■■□□ 2.52
VIL1-204ENST00000440053 RPGRIP1LQ68CZ1 1315 aa30.78■■■□□ 2.52
VIL1-204ENST00000440053 CCDC144AA2RUR9 1427 aa30.77■■■□□ 2.52
VIL1-204ENST00000440053 NCOA3Q9Y6Q9 1424 aa30.75■■■□□ 2.51
VIL1-204ENST00000440053 C19orf44Q9H6X5 657 aa30.75■■■□□ 2.51
VIL1-204ENST00000440053 ADGRF5Q8IZF2 1346 aa30.71■■■□□ 2.51
VIL1-204ENST00000440053 ROBO1Q9Y6N7 1651 aa30.71■■■□□ 2.51
VIL1-204ENST00000440053 ACIN1Q9UKV3 1341 aaKnown RBP30.7■■■□□ 2.51
VIL1-204ENST00000440053 SPATA31E1Q6ZUB1 1445 aa30.7■■■□□ 2.5
VIL1-204ENST00000440053 ATF3P18847 181 aa30.7■■■□□ 2.5
VIL1-204ENST00000440053 XRN1Q8IZH2 1706 aaKnown RBP30.68■■■□□ 2.5
VIL1-204ENST00000440053 CADPS2Q86UW7 1296 aa30.67■■■□□ 2.5
VIL1-204ENST00000440053 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.67■■■□□ 2.5
VIL1-204ENST00000440053 MED1Q15648 1581 aaPredicted RBP30.66■■■□□ 2.5
VIL1-204ENST00000440053 PPLO60437 1756 aa30.66■■■□□ 2.5
VIL1-204ENST00000440053 SETD1AO15047 1707 aaKnown RBP30.6■■■□□ 2.49
VIL1-204ENST00000440053 ROBO2Q9HCK4 1378 aa30.59■■■□□ 2.49
VIL1-204ENST00000440053 ANKRD30BQ9BXX2 1392 aa30.57■■■□□ 2.48
VIL1-204ENST00000440053 HRCP23327 699 aa30.57■■■□□ 2.48
VIL1-204ENST00000440053 TMEM132EQ6IEE7 984 aa30.56■■■□□ 2.48
VIL1-204ENST00000440053 BRINP3Q76B58 766 aa30.55■■■□□ 2.48
VIL1-204ENST00000440053 STK26Q9P289 416 aa30.55■■■□□ 2.48
VIL1-204ENST00000440053 PHF23Q9BUL5 403 aaPredicted RBP30.54■■■□□ 2.48
VIL1-204ENST00000440053 ADGRL3Q9HAR2 1447 aa30.51■■■□□ 2.47
VIL1-204ENST00000440053 PHLPP1O60346 1717 aa30.51■■■□□ 2.47
VIL1-204ENST00000440053 IFT172Q9UG01 1749 aa30.51■■■□□ 2.47
VIL1-204ENST00000440053 DCCP43146 1447 aa30.5■■■□□ 2.47
VIL1-204ENST00000440053 MST1RQ04912 1400 aa30.5■■■□□ 2.47
VIL1-204ENST00000440053 PTCH1Q13635 1447 aa30.5■■■□□ 2.47
VIL1-204ENST00000440053 WAPLQ7Z5K2 1190 aa30.47■■■□□ 2.47
VIL1-204ENST00000440053 PIK3C2GO75747 1445 aa30.46■■■□□ 2.47
VIL1-204ENST00000440053 NALCNQ8IZF0 1738 aa30.46■■■□□ 2.47
VIL1-204ENST00000440053 DDX17Q92841 729 aaKnown RBP30.46■■■□□ 2.47
VIL1-204ENST00000440053 CFAP70Q5T0N1 1121 aa30.45■■■□□ 2.47
VIL1-204ENST00000440053 RGS17Q9UGC6 210 aaPredicted RBP30.45■■■□□ 2.47
VIL1-204ENST00000440053 C14orf93Q9H972 538 aaKnown RBP30.44■■■□□ 2.46
VIL1-204ENST00000440053 SOCS7O14512 581 aa30.44■■■□□ 2.46
VIL1-204ENST00000440053 KDM2AQ9Y2K7 1162 aa30.43■■■□□ 2.46
VIL1-204ENST00000440053 JCADQ9P266 1359 aa30.43■■■□□ 2.46
VIL1-204ENST00000440053 COL16A1Q07092 1604 aaPredicted RBP30.43■■■□□ 2.46
VIL1-204ENST00000440053 PRAG1Q86YV5 1406 aa30.42■■■□□ 2.46
VIL1-204ENST00000440053 ASXL1Q8IXJ9 1541 aa30.42■■■□□ 2.46
VIL1-204ENST00000440053 LRPPRCP42704 1394 aaKnown RBP30.41■■■□□ 2.46
VIL1-204ENST00000440053 ORAI2Q96SN7 254 aa30.39■■■□□ 2.46
VIL1-204ENST00000440053 AHDC1Q5TGY3 1603 aaPredicted RBP30.39■■■□□ 2.46
VIL1-204ENST00000440053 PLEKHH1Q9ULM0 1364 aa30.39■■■□□ 2.45
VIL1-204ENST00000440053 C1orf167Q5SNV9 1468 aa30.38■■■□□ 2.45
VIL1-204ENST00000440053 ABCC11Q96J66 1382 aa30.38■■■□□ 2.45
VIL1-204ENST00000440053 DCAF11Q8TEB1 546 aa30.38■■■□□ 2.45
VIL1-204ENST00000440053 NRXN1Q9ULB1 1477 aa30.37■■■□□ 2.45
VIL1-204ENST00000440053 YTHDC2Q9H6S0 1430 aaKnown RBP30.36■■■□□ 2.45
VIL1-204ENST00000440053 MYOM2P54296 1465 aa30.35■■■□□ 2.45
VIL1-204ENST00000440053 TECPR2O15040 1411 aa30.33■■■□□ 2.45
VIL1-204ENST00000440053 NUTM2FA1L443 756 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms