RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	ZFYVE9	O95405	1425 aa		25.37	■■□□□ 1.65
LAMB1-205	ENST00000439976	RPRD2	Q5VT52	1461 aa	Known RBP	25.37	■■□□□ 1.65
LAMB1-205	ENST00000439976	MYO5B	Q9ULV0	1848 aa		25.35	■■□□□ 1.65
LAMB1-205	ENST00000439976	ANKRD50	Q9ULJ7	1429 aa		25.35	■■□□□ 1.65
LAMB1-205	ENST00000439976	POTEA	Q6S8J7	498 aa		25.32	■■□□□ 1.64
LAMB1-205	ENST00000439976	PLEKHG1	Q9ULL1	1385 aa		25.31	■■□□□ 1.64
LAMB1-205	ENST00000439976	TMEM131L	A2VDJ0	1609 aa		25.31	■■□□□ 1.64
LAMB1-205	ENST00000439976	CHD2	O14647	1828 aa	Known RBP	25.31	■■□□□ 1.64
LAMB1-205	ENST00000439976	GCC2	Q8IWJ2	1684 aa		25.31	■■□□□ 1.64
LAMB1-205	ENST00000439976	MSH6	P52701	1360 aa		25.29	■■□□□ 1.64
LAMB1-205	ENST00000439976	RIMS2	Q9UQ26	1411 aa		25.29	■■□□□ 1.64
LAMB1-205	ENST00000439976	FAM50A	Q14320	339 aa	Known RBP	25.28	■■□□□ 1.64
LAMB1-205	ENST00000439976	SLAIN2	Q9P270	581 aa		25.27	■■□□□ 1.64
LAMB1-205	ENST00000439976	UNC13B	O14795	1591 aa		25.27	■■□□□ 1.64
LAMB1-205	ENST00000439976	BCAN	Q96GW7	911 aa		25.26	■■□□□ 1.63
LAMB1-205	ENST00000439976	PHLPP1	O60346	1717 aa		25.23	■■□□□ 1.63
LAMB1-205	ENST00000439976	ADAMTS13	Q76LX8	1427 aa		25.22	■■□□□ 1.63
LAMB1-205	ENST00000439976	TBX22	Q9Y458	520 aa		25.22	■■□□□ 1.63
LAMB1-205	ENST00000439976		E9PCH4	1651 aa		25.22	■■□□□ 1.63
LAMB1-205	ENST00000439976	COL16A1	Q07092	1604 aa	Predicted RBP	25.2	■■□□□ 1.62
LAMB1-205	ENST00000439976	PPP1R15A	O75807	674 aa	Predicted RBP	25.2	■■□□□ 1.62
LAMB1-205	ENST00000439976	JCAD	Q9P266	1359 aa		25.19	■■□□□ 1.62
LAMB1-205	ENST00000439976	NCOA3	Q9Y6Q9	1424 aa		25.19	■■□□□ 1.62
LAMB1-205	ENST00000439976	HDGF	P51858	240 aa	Known RBP	25.18	■■□□□ 1.62
LAMB1-205	ENST00000439976	IQGAP3	Q86VI3	1631 aa		25.15	■■□□□ 1.62
LAMB1-205	ENST00000439976	NUTM2D	Q5VT03	806 aa	Predicted RBP	25.15	■■□□□ 1.62
LAMB1-205	ENST00000439976	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	25.15	■■□□□ 1.62
LAMB1-205	ENST00000439976	DIP2A	Q14689	1571 aa		25.14	■■□□□ 1.62
LAMB1-205	ENST00000439976	ROCK1	Q13464	1354 aa		25.14	■■□□□ 1.61
LAMB1-205	ENST00000439976	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	25.14	■■□□□ 1.61
LAMB1-205	ENST00000439976	SETD1A	O15047	1707 aa	Known RBP	25.13	■■□□□ 1.61
LAMB1-205	ENST00000439976	LRP6	O75581	1613 aa		25.12	■■□□□ 1.61
LAMB1-205	ENST00000439976	CHGA	P10645	457 aa	Known RBP	25.12	■■□□□ 1.61
LAMB1-205	ENST00000439976	PIK3R4	Q99570	1358 aa		25.12	■■□□□ 1.61
LAMB1-205	ENST00000439976	AHDC1	Q5TGY3	1603 aa	Predicted RBP	25.1	■■□□□ 1.61
LAMB1-205	ENST00000439976	PTPRU	Q92729	1446 aa		25.1	■■□□□ 1.61
LAMB1-205	ENST00000439976	C19orf44	Q9H6X5	657 aa		25.09	■■□□□ 1.61
LAMB1-205	ENST00000439976	CADPS2	Q86UW7	1296 aa		25.07	■■□□□ 1.6
LAMB1-205	ENST00000439976	C14orf37	Q86TY3	774 aa		25.06	■■□□□ 1.6
LAMB1-205	ENST00000439976	SPATA31A6	Q5VVP1	1343 aa		25.06	■■□□□ 1.6
LAMB1-205	ENST00000439976	TRPM2	O94759	1503 aa		25.06	■■□□□ 1.6
LAMB1-205	ENST00000439976	NUP155	O75694	1391 aa		25.05	■■□□□ 1.6
LAMB1-205	ENST00000439976	NRXN3	Q9Y4C0	1643 aa		25.05	■■□□□ 1.6
LAMB1-205	ENST00000439976	SHPRH	Q149N8	1683 aa		25.04	■■□□□ 1.6
LAMB1-205	ENST00000439976	AMOTL2	Q9Y2J4	779 aa		25.03	■■□□□ 1.6
LAMB1-205	ENST00000439976	ATF3	P18847	181 aa		25.02	■■□□□ 1.6
LAMB1-205	ENST00000439976	XRN1	Q8IZH2	1706 aa	Known RBP	25.01	■■□□□ 1.59
LAMB1-205	ENST00000439976	BRINP3	Q76B58	766 aa		25	■■□□□ 1.59
LAMB1-205	ENST00000439976	SETBP1	Q9Y6X0	1596 aa		25	■■□□□ 1.59
LAMB1-205	ENST00000439976	DCC	P43146	1447 aa		24.98	■■□□□ 1.59
LAMB1-205	ENST00000439976	SPHKAP	Q2M3C7	1700 aa		24.96	■■□□□ 1.59
LAMB1-205	ENST00000439976	ASXL1	Q8IXJ9	1541 aa		24.96	■■□□□ 1.59
LAMB1-205	ENST00000439976	ZNF772	Q68DY9	489 aa	Predicted RBP	24.95	■■□□□ 1.58
LAMB1-205	ENST00000439976	MEX3C	Q5U5Q3	659 aa	Known RBP	24.94	■■□□□ 1.58
LAMB1-205	ENST00000439976	MST1R	Q04912	1400 aa		24.94	■■□□□ 1.58
LAMB1-205	ENST00000439976	MET	P08581	1390 aa		24.93	■■□□□ 1.58
LAMB1-205	ENST00000439976	ITGAE	P38570	1179 aa		24.93	■■□□□ 1.58
LAMB1-205	ENST00000439976	NHSL1	Q5SYE7	1610 aa		24.91	■■□□□ 1.58
LAMB1-205	ENST00000439976	SETD5	Q9C0A6	1442 aa		24.91	■■□□□ 1.58
LAMB1-205	ENST00000439976	UPF1	Q92900	1129 aa	Known RBP eCLIP	24.9	■■□□□ 1.58
LAMB1-205	ENST00000439976	TRIM52	Q96A61	297 aa		24.89	■■□□□ 1.58
LAMB1-205	ENST00000439976	NEXMIF	Q5QGS0	1516 aa		24.88	■■□□□ 1.57
LAMB1-205	ENST00000439976	CLTCL1	P53675	1640 aa		24.86	■■□□□ 1.57
LAMB1-205	ENST00000439976	NUTM2B	A6NNL0	878 aa	Predicted RBP	24.86	■■□□□ 1.57
LAMB1-205	ENST00000439976	NUTM2E	B1AL46	878 aa	Predicted RBP	24.86	■■□□□ 1.57
LAMB1-205	ENST00000439976	NUTM2A	Q8IVF1	878 aa	Predicted RBP	24.86	■■□□□ 1.57
LAMB1-205	ENST00000439976	ADGRL3	Q9HAR2	1447 aa		24.86	■■□□□ 1.57
LAMB1-205	ENST00000439976	ZNF326	Q5BKZ1	582 aa	Known RBP	24.85	■■□□□ 1.57
LAMB1-205	ENST00000439976	NALCN	Q8IZF0	1738 aa		24.85	■■□□□ 1.57
LAMB1-205	ENST00000439976	CDK12	Q9NYV4	1490 aa	Predicted RBP	24.83	■■□□□ 1.57
LAMB1-205	ENST00000439976	RXRB	P28702	533 aa		24.83	■■□□□ 1.57
LAMB1-205	ENST00000439976	PPARGC1B	Q86YN6	1023 aa	Known RBP	24.83	■■□□□ 1.57
LAMB1-205	ENST00000439976	DDX17	Q92841	729 aa	Known RBP	24.83	■■□□□ 1.57
LAMB1-205	ENST00000439976	AFF2	P51816	1311 aa		24.82	■■□□□ 1.56
LAMB1-205	ENST00000439976	PNPLA6	Q8IY17	1366 aa		24.8	■■□□□ 1.56
LAMB1-205	ENST00000439976	LRRC59	Q96AG4	307 aa	Known RBP	24.8	■■□□□ 1.56
LAMB1-205	ENST00000439976	LAMC1	P11047	1609 aa		24.76	■■□□□ 1.55
LAMB1-205	ENST00000439976	KIF1B	O60333	1816 aa		24.76	■■□□□ 1.55
LAMB1-205	ENST00000439976	NAIP	Q13075	1403 aa		24.76	■■□□□ 1.55
LAMB1-205	ENST00000439976	C1orf167	Q5SNV9	1468 aa		24.76	■■□□□ 1.55
LAMB1-205	ENST00000439976	PTCH1	Q13635	1447 aa		24.75	■■□□□ 1.55
LAMB1-205	ENST00000439976	RGS12	O14924	1447 aa		24.73	■■□□□ 1.55
LAMB1-205	ENST00000439976	ROBO2	Q9HCK4	1378 aa		24.73	■■□□□ 1.55
LAMB1-205	ENST00000439976	PRAG1	Q86YV5	1406 aa		24.72	■■□□□ 1.55
LAMB1-205	ENST00000439976	RRBP1	Q9P2E9	1410 aa	Known RBP	24.72	■■□□□ 1.55
LAMB1-205	ENST00000439976	C8orf37	Q96NL8	207 aa		24.72	■■□□□ 1.55
LAMB1-205	ENST00000439976	SOS2	Q07890	1332 aa	Predicted RBP	24.69	■■□□□ 1.54
LAMB1-205	ENST00000439976	QTRT2	Q9H974	415 aa	Known RBP	24.69	■■□□□ 1.54
LAMB1-205	ENST00000439976	RBM6	P78332	1123 aa	Known RBP	24.68	■■□□□ 1.54
LAMB1-205	ENST00000439976	ORAI2	Q96SN7	254 aa		24.68	■■□□□ 1.54
LAMB1-205	ENST00000439976	VGF	O15240	615 aa	Predicted RBP	24.66	■■□□□ 1.54
LAMB1-205	ENST00000439976	ADAMTS2	O95450	1211 aa		24.64	■■□□□ 1.54
LAMB1-205	ENST00000439976	PPL	O60437	1756 aa		24.64	■■□□□ 1.53
LAMB1-205	ENST00000439976	RPGRIP1L	Q68CZ1	1315 aa		24.62	■■□□□ 1.53
LAMB1-205	ENST00000439976	NGLY1	Q96IV0	654 aa		24.62	■■□□□ 1.53
LAMB1-205	ENST00000439976	HFM1	A2PYH4	1435 aa		24.61	■■□□□ 1.53
LAMB1-205	ENST00000439976	COL22A1	Q8NFW1	1626 aa	Predicted RBP	24.6	■■□□□ 1.53
LAMB1-205	ENST00000439976	SRCAP	Q6ZRS2	3230 aa		24.57	■■□□□ 1.52
LAMB1-205	ENST00000439976	FNBP4	Q8N3X1	1017 aa	Predicted RBP	24.57	■■□□□ 1.52
LAMB1-205	ENST00000439976	CDC42BPG	Q6DT37	1551 aa		24.56	■■□□□ 1.52

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