RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 VGFO15240 615 aaPredicted RBP10.73□□□□□ -0.69
UBR3-205ENST00000439681 LTKP29376 864 aa10.73□□□□□ -0.69
UBR3-205ENST00000439681 MYO3AQ8NEV4 1616 aa10.73□□□□□ -0.69
UBR3-205ENST00000439681 CEP170BQ9Y4F5 1589 aaPredicted RBP10.72□□□□□ -0.69
UBR3-205ENST00000439681 NEXMIFQ5QGS0 1516 aa10.72□□□□□ -0.69
UBR3-205ENST00000439681 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.72□□□□□ -0.69
UBR3-205ENST00000439681 PRAG1Q86YV5 1406 aa10.72□□□□□ -0.69
UBR3-205ENST00000439681 KIF1BO60333 1816 aa10.71□□□□□ -0.69
UBR3-205ENST00000439681 ARHGAP23Q9P227 1491 aa10.71□□□□□ -0.69
UBR3-205ENST00000439681 HDGFP51858 240 aaKnown RBP10.71□□□□□ -0.69
UBR3-205ENST00000439681 TXNDC2Q86VQ3 553 aa10.71□□□□□ -0.69
UBR3-205ENST00000439681 MYOM2P54296 1465 aa10.71□□□□□ -0.7
UBR3-205ENST00000439681 NRXN1Q9ULB1 1477 aa10.71□□□□□ -0.7
UBR3-205ENST00000439681 UBR1Q8IWV7 1749 aa10.71□□□□□ -0.7
UBR3-205ENST00000439681 KDM5AP29375 1690 aaKnown RBP10.7□□□□□ -0.7
UBR3-205ENST00000439681 SLIT1O75093 1534 aa10.7□□□□□ -0.7
UBR3-205ENST00000439681 SETD1BQ9UPS6 1966 aaKnown RBP10.69□□□□□ -0.7
UBR3-205ENST00000439681 EID1Q9Y6B2 187 aa10.69□□□□□ -0.7
UBR3-205ENST00000439681 NBPF1Q3BBV0 1214 aa10.69□□□□□ -0.7
UBR3-205ENST00000439681 CFAP70Q5T0N1 1121 aa10.69□□□□□ -0.7
UBR3-205ENST00000439681 C14orf93Q9H972 538 aaKnown RBP10.69□□□□□ -0.7
UBR3-205ENST00000439681 ANKLE2Q86XL3 938 aa10.68□□□□□ -0.7
UBR3-205ENST00000439681 PIK3C2GO75747 1445 aa10.68□□□□□ -0.7
UBR3-205ENST00000439681 HSPA2P54652 639 aa10.67□□□□□ -0.7
UBR3-205ENST00000439681 SENP3Q9H4L4 574 aaPredicted RBP10.67□□□□□ -0.7
UBR3-205ENST00000439681 ZNF142P52746 1687 aaPredicted RBP10.67□□□□□ -0.7
UBR3-205ENST00000439681 LMTK3Q96Q04 1460 aa10.67□□□□□ -0.7
UBR3-205ENST00000439681 MYO5BQ9ULV0 1848 aa10.66□□□□□ -0.7
UBR3-205ENST00000439681 NCKAP5LQ9HCH0 1330 aa10.66□□□□□ -0.7
UBR3-205ENST00000439681 PLEKHG1Q9ULL1 1385 aa10.66□□□□□ -0.7
UBR3-205ENST00000439681 IFT172Q9UG01 1749 aa10.66□□□□□ -0.7
UBR3-205ENST00000439681 PPLO60437 1756 aa10.66□□□□□ -0.7
UBR3-205ENST00000439681 SCAF11Q99590 1463 aaKnown RBP10.65□□□□□ -0.7
UBR3-205ENST00000439681 RALGAPBQ86X10 1494 aa10.65□□□□□ -0.71
UBR3-205ENST00000439681 GPRASP1Q5JY77 1395 aa10.64□□□□□ -0.71
UBR3-205ENST00000439681 TMEM132EQ6IEE7 984 aa10.63□□□□□ -0.71
UBR3-205ENST00000439681 ROCK2O75116 1388 aaKnown RBP10.63□□□□□ -0.71
UBR3-205ENST00000439681 ADAMTS13Q76LX8 1427 aa10.63□□□□□ -0.71
UBR3-205ENST00000439681 BCANQ96GW7 911 aa10.63□□□□□ -0.71
UBR3-205ENST00000439681 SLC26A8Q96RN1 970 aa10.63□□□□□ -0.71
UBR3-205ENST00000439681 CARD11Q9BXL7 1154 aa10.63□□□□□ -0.71
UBR3-205ENST00000439681 TBX22Q9Y458 520 aa10.63□□□□□ -0.71
UBR3-205ENST00000439681 MED14O60244 1454 aa10.63□□□□□ -0.71
UBR3-205ENST00000439681 METP08581 1390 aa10.62□□□□□ -0.71
UBR3-205ENST00000439681 SETBP1Q9Y6X0 1596 aa10.62□□□□□ -0.71
UBR3-205ENST00000439681 ALKQ9UM73 1620 aa10.61□□□□□ -0.71
UBR3-205ENST00000439681 NPHP4O75161 1426 aaPredicted RBP10.61□□□□□ -0.71
UBR3-205ENST00000439681 TRPM1Q7Z4N2 1603 aa10.6□□□□□ -0.71
UBR3-205ENST00000439681 NRXN3Q9Y4C0 1643 aa10.6□□□□□ -0.71
UBR3-205ENST00000439681 ADGRB1O14514 1584 aa10.6□□□□□ -0.71
UBR3-205ENST00000439681 HSPA5P11021 654 aaKnown RBP10.59□□□□□ -0.71
UBR3-205ENST00000439681 ASXL1Q8IXJ9 1541 aa10.59□□□□□ -0.71
UBR3-205ENST00000439681 EIF4G2P78344 907 aaKnown RBP eCLIP10.58□□□□□ -0.72
UBR3-205ENST00000439681 STK26Q9P289 416 aa10.58□□□□□ -0.72
UBR3-205ENST00000439681 LRPPRCP42704 1394 aaKnown RBP10.58□□□□□ -0.72
UBR3-205ENST00000439681 KIAA1210Q9ULL0 1709 aa10.58□□□□□ -0.72
UBR3-205ENST00000439681 TRAK1Q9UPV9 953 aa10.58□□□□□ -0.72
UBR3-205ENST00000439681 USP47Q96K76 1375 aa10.57□□□□□ -0.72
UBR3-205ENST00000439681 HIRIP3Q9BW71 556 aaPredicted RBP10.57□□□□□ -0.72
UBR3-205ENST00000439681 PTPRUQ92729 1446 aa10.57□□□□□ -0.72
UBR3-205ENST00000439681 YTHDC2Q9H6S0 1430 aaKnown RBP10.57□□□□□ -0.72
UBR3-205ENST00000439681 ABCC11Q96J66 1382 aa10.57□□□□□ -0.72
UBR3-205ENST00000439681 ST20-MTHFSA0A0A6YYL1 179 aa10.56□□□□□ -0.72
UBR3-205ENST00000439681 AMOTL2Q9Y2J4 779 aa10.56□□□□□ -0.72
UBR3-205ENST00000439681 IQGAP1P46940 1657 aa10.56□□□□□ -0.72
UBR3-205ENST00000439681 SIRT1Q96EB6 747 aa10.55□□□□□ -0.72
UBR3-205ENST00000439681 PIK3R4Q99570 1358 aa10.55□□□□□ -0.72
UBR3-205ENST00000439681 LAMC1P11047 1609 aa10.55□□□□□ -0.72
UBR3-205ENST00000439681 SETD1AO15047 1707 aaKnown RBP10.55□□□□□ -0.72
UBR3-205ENST00000439681 TESK2Q96S53 571 aa10.54□□□□□ -0.72
UBR3-205ENST00000439681 DIP2AQ14689 1571 aa10.54□□□□□ -0.72
UBR3-205ENST00000439681 STRCQ7RTU9 1775 aa10.54□□□□□ -0.72
UBR3-205ENST00000439681 KCNA6P17658 529 aa10.53□□□□□ -0.72
UBR3-205ENST00000439681 WAPLQ7Z5K2 1190 aa10.53□□□□□ -0.72
UBR3-205ENST00000439681 TECPR2O15040 1411 aa10.53□□□□□ -0.72
UBR3-205ENST00000439681 ROBO2Q9HCK4 1378 aa10.53□□□□□ -0.72
UBR3-205ENST00000439681 PRAM1Q96QH2 718 aa10.53□□□□□ -0.72
UBR3-205ENST00000439681 DMRT2Q9Y5R5 561 aa10.53□□□□□ -0.72
UBR3-205ENST00000439681 CENPJQ9HC77 1338 aaPredicted RBP10.52□□□□□ -0.73
UBR3-205ENST00000439681 PLEKHH1Q9ULM0 1364 aa10.52□□□□□ -0.73
UBR3-205ENST00000439681 ZNF316A6NFI3 1004 aaPredicted RBP10.52□□□□□ -0.73
UBR3-205ENST00000439681 C11orf95C9JLR9 678 aaPredicted RBP10.52□□□□□ -0.73
UBR3-205ENST00000439681 POLR1AO95602 1720 aaPredicted RBP10.52□□□□□ -0.73
UBR3-205ENST00000439681 EIF3AQ14152 1382 aaKnown RBP10.51□□□□□ -0.73
UBR3-205ENST00000439681 DLC1Q96QB1 1528 aa10.51□□□□□ -0.73
UBR3-205ENST00000439681 FAM135BQ49AJ0 1406 aa10.51□□□□□ -0.73
UBR3-205ENST00000439681 POGKQ9P215 609 aa10.5□□□□□ -0.73
UBR3-205ENST00000439681 SAFB2Q14151 953 aaKnown RBP eCLIP10.5□□□□□ -0.73
UBR3-205ENST00000439681 PHF23Q9BUL5 403 aaPredicted RBP10.49□□□□□ -0.73
UBR3-205ENST00000439681 PTCH1Q13635 1447 aa10.48□□□□□ -0.73
UBR3-205ENST00000439681 ZNF335Q9H4Z2 1342 aaPredicted RBP10.48□□□□□ -0.73
UBR3-205ENST00000439681 SBNO2Q9Y2G9 1366 aa10.48□□□□□ -0.73
UBR3-205ENST00000439681 RBM33Q96EV2 1170 aaKnown RBP10.48□□□□□ -0.73
UBR3-205ENST00000439681 MINK1Q8N4C8 1332 aaPredicted RBP10.48□□□□□ -0.73
UBR3-205ENST00000439681 CPS1P31327 1500 aa10.47□□□□□ -0.73
UBR3-205ENST00000439681 XRN1Q8IZH2 1706 aaKnown RBP10.47□□□□□ -0.73
UBR3-205ENST00000439681 SLC24A1O60721 1099 aa10.46□□□□□ -0.73
UBR3-205ENST00000439681 TMF1P82094 1093 aa10.46□□□□□ -0.73
UBR3-205ENST00000439681 WASHC2AQ641Q2 1341 aa10.46□□□□□ -0.73
UBR3-205ENST00000439681 PROSER2Q86WR7 435 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms