RNA–Protein interactions for RNA: ENST00000439200.5

CHEK2-216, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 906 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-216ENST00000439200 SLC52A1Q9NWF4 448 aa20.61■□□□□ 0.89
CHEK2-216ENST00000439200 FAM50AQ14320 339 aaKnown RBP20.6■□□□□ 0.89
CHEK2-216ENST00000439200 ANKRD50Q9ULJ7 1429 aa20.6■□□□□ 0.89
CHEK2-216ENST00000439200 RPRD2Q5VT52 1461 aaKnown RBP20.59■□□□□ 0.89
CHEK2-216ENST00000439200 ZFYVE9O95405 1425 aa20.59■□□□□ 0.89
CHEK2-216ENST00000439200 GCC2Q8IWJ2 1684 aa20.58■□□□□ 0.89
CHEK2-216ENST00000439200 MYO5BQ9ULV0 1848 aa20.58■□□□□ 0.89
CHEK2-216ENST00000439200 MSH6P52701 1360 aa20.56■□□□□ 0.88
CHEK2-216ENST00000439200 PLEKHG1Q9ULL1 1385 aa20.56■□□□□ 0.88
CHEK2-216ENST00000439200 RIMS2Q9UQ26 1411 aa20.55■□□□□ 0.88
CHEK2-216ENST00000439200 POTEAQ6S8J7 498 aa20.55■□□□□ 0.88
CHEK2-216ENST00000439200 TMEM131LA2VDJ0 1609 aa20.54■□□□□ 0.88
CHEK2-216ENST00000439200 PPP1R15AO75807 674 aaPredicted RBP20.53■□□□□ 0.88
CHEK2-216ENST00000439200 CHD2O14647 1828 aaKnown RBP20.53■□□□□ 0.88
CHEK2-216ENST00000439200 PHLPP1O60346 1717 aa20.53■□□□□ 0.88
CHEK2-216ENST00000439200 UNC13BO14795 1591 aa20.52■□□□□ 0.88
CHEK2-216ENST00000439200 SLAIN2Q9P270 581 aa20.51■□□□□ 0.87
CHEK2-216ENST00000439200 CHGAP10645 457 aaKnown RBP20.49■□□□□ 0.87
CHEK2-216ENST00000439200 E9PCH4 1651 aa20.48■□□□□ 0.87
CHEK2-216ENST00000439200 HDGFP51858 240 aaKnown RBP20.47■□□□□ 0.87
CHEK2-216ENST00000439200 NUTM2DQ5VT03 806 aaPredicted RBP20.47■□□□□ 0.87
CHEK2-216ENST00000439200 JCADQ9P266 1359 aa20.46■□□□□ 0.87
CHEK2-216ENST00000439200 COL16A1Q07092 1604 aaPredicted RBP20.45■□□□□ 0.87
CHEK2-216ENST00000439200 ADAMTS13Q76LX8 1427 aa20.45■□□□□ 0.86
CHEK2-216ENST00000439200 TBX22Q9Y458 520 aa20.45■□□□□ 0.86
CHEK2-216ENST00000439200 C14orf37Q86TY3 774 aa20.44■□□□□ 0.86
CHEK2-216ENST00000439200 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.44■□□□□ 0.86
CHEK2-216ENST00000439200 IQGAP3Q86VI3 1631 aa20.44■□□□□ 0.86
CHEK2-216ENST00000439200 SETD1AO15047 1707 aaKnown RBP20.44■□□□□ 0.86
CHEK2-216ENST00000439200 DIP2AQ14689 1571 aa20.43■□□□□ 0.86
CHEK2-216ENST00000439200 NCOA3Q9Y6Q9 1424 aa20.42■□□□□ 0.86
CHEK2-216ENST00000439200 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.41■□□□□ 0.86
CHEK2-216ENST00000439200 LRP6O75581 1613 aa20.4■□□□□ 0.86
CHEK2-216ENST00000439200 ROCK1Q13464 1354 aa20.4■□□□□ 0.86
CHEK2-216ENST00000439200 PIK3R4Q99570 1358 aa20.38■□□□□ 0.85
CHEK2-216ENST00000439200 AHDC1Q5TGY3 1603 aaPredicted RBP20.38■□□□□ 0.85
CHEK2-216ENST00000439200 TRPM2O94759 1503 aa20.37■□□□□ 0.85
CHEK2-216ENST00000439200 PTPRUQ92729 1446 aa20.37■□□□□ 0.85
CHEK2-216ENST00000439200 NUP155O75694 1391 aa20.36■□□□□ 0.85
CHEK2-216ENST00000439200 ATF3P18847 181 aa20.36■□□□□ 0.85
CHEK2-216ENST00000439200 CADPS2Q86UW7 1296 aa20.36■□□□□ 0.85
CHEK2-216ENST00000439200 C19orf44Q9H6X5 657 aa20.36■□□□□ 0.85
CHEK2-216ENST00000439200 ITGAEP38570 1179 aa20.35■□□□□ 0.85
CHEK2-216ENST00000439200 AMOTL2Q9Y2J4 779 aa20.34■□□□□ 0.85
CHEK2-216ENST00000439200 SHPRHQ149N8 1683 aa20.34■□□□□ 0.85
CHEK2-216ENST00000439200 SPATA31A6Q5VVP1 1343 aa20.33■□□□□ 0.85
CHEK2-216ENST00000439200 MEX3CQ5U5Q3 659 aaKnown RBP20.33■□□□□ 0.85
CHEK2-216ENST00000439200 NRXN3Q9Y4C0 1643 aa20.32■□□□□ 0.84
CHEK2-216ENST00000439200 XRN1Q8IZH2 1706 aaKnown RBP20.3■□□□□ 0.84
CHEK2-216ENST00000439200 BRINP3Q76B58 766 aa20.3■□□□□ 0.84
CHEK2-216ENST00000439200 SPHKAPQ2M3C7 1700 aa20.3■□□□□ 0.84
CHEK2-216ENST00000439200 SETBP1Q9Y6X0 1596 aa20.29■□□□□ 0.84
CHEK2-216ENST00000439200 DCCP43146 1447 aa20.27■□□□□ 0.84
CHEK2-216ENST00000439200 ASXL1Q8IXJ9 1541 aa20.27■□□□□ 0.84
CHEK2-216ENST00000439200 ZNF772Q68DY9 489 aaPredicted RBP20.27■□□□□ 0.84
CHEK2-216ENST00000439200 ZNF326Q5BKZ1 582 aaKnown RBP20.26■□□□□ 0.83
CHEK2-216ENST00000439200 PPARGC1BQ86YN6 1023 aaKnown RBP20.26■□□□□ 0.83
CHEK2-216ENST00000439200 TRIM52Q96A61 297 aa20.26■□□□□ 0.83
CHEK2-216ENST00000439200 NUTM2BA6NNL0 878 aaPredicted RBP20.25■□□□□ 0.83
CHEK2-216ENST00000439200 NUTM2EB1AL46 878 aaPredicted RBP20.25■□□□□ 0.83
CHEK2-216ENST00000439200 NUTM2AQ8IVF1 878 aaPredicted RBP20.25■□□□□ 0.83
CHEK2-216ENST00000439200 MST1RQ04912 1400 aa20.25■□□□□ 0.83
CHEK2-216ENST00000439200 METP08581 1390 aa20.24■□□□□ 0.83
CHEK2-216ENST00000439200 NHSL1Q5SYE7 1610 aa20.23■□□□□ 0.83
CHEK2-216ENST00000439200 CLTCL1P53675 1640 aa20.22■□□□□ 0.83
CHEK2-216ENST00000439200 NEXMIFQ5QGS0 1516 aa20.21■□□□□ 0.83
CHEK2-216ENST00000439200 SETD5Q9C0A6 1442 aa20.2■□□□□ 0.82
CHEK2-216ENST00000439200 UPF1Q92900 1129 aaKnown RBP eCLIP20.2■□□□□ 0.82
CHEK2-216ENST00000439200 ADGRL3Q9HAR2 1447 aa20.19■□□□□ 0.82
CHEK2-216ENST00000439200 NALCNQ8IZF0 1738 aa20.19■□□□□ 0.82
CHEK2-216ENST00000439200 RXRBP28702 533 aa20.18■□□□□ 0.82
CHEK2-216ENST00000439200 DDX17Q92841 729 aaKnown RBP20.18■□□□□ 0.82
CHEK2-216ENST00000439200 AFF2P51816 1311 aa20.18■□□□□ 0.82
CHEK2-216ENST00000439200 SRCAPQ6ZRS2 3230 aa20.15■□□□□ 0.82
CHEK2-216ENST00000439200 CDK12Q9NYV4 1490 aaPredicted RBP20.14■□□□□ 0.81
CHEK2-216ENST00000439200 PNPLA6Q8IY17 1366 aa20.14■□□□□ 0.81
CHEK2-216ENST00000439200 LRRC59Q96AG4 307 aaKnown RBP20.14■□□□□ 0.81
CHEK2-216ENST00000439200 KIF1BO60333 1816 aa20.12■□□□□ 0.81
CHEK2-216ENST00000439200 C8orf37Q96NL8 207 aa20.12■□□□□ 0.81
CHEK2-216ENST00000439200 NAIPQ13075 1403 aa20.11■□□□□ 0.81
CHEK2-216ENST00000439200 C1orf167Q5SNV9 1468 aa20.11■□□□□ 0.81
CHEK2-216ENST00000439200 RGS12O14924 1447 aa20.1■□□□□ 0.81
CHEK2-216ENST00000439200 PTCH1Q13635 1447 aa20.09■□□□□ 0.81
CHEK2-216ENST00000439200 ROBO2Q9HCK4 1378 aa20.08■□□□□ 0.81
CHEK2-216ENST00000439200 RRBP1Q9P2E9 1410 aaKnown RBP20.07■□□□□ 0.8
CHEK2-216ENST00000439200 LAMC1P11047 1609 aa20.06■□□□□ 0.8
CHEK2-216ENST00000439200 ADAMTS2O95450 1211 aa20.06■□□□□ 0.8
CHEK2-216ENST00000439200 QTRT2Q9H974 415 aaKnown RBP20.06■□□□□ 0.8
CHEK2-216ENST00000439200 EP400Q96L91 3159 aa20.04■□□□□ 0.8
CHEK2-216ENST00000439200 VGFO15240 615 aaPredicted RBP20.04■□□□□ 0.8
CHEK2-216ENST00000439200 RBM6P78332 1123 aaKnown RBP20.04■□□□□ 0.8
CHEK2-216ENST00000439200 ORAI2Q96SN7 254 aa20.04■□□□□ 0.8
CHEK2-216ENST00000439200 NGLY1Q96IV0 654 aa20.02■□□□□ 0.8
CHEK2-216ENST00000439200 PRAG1Q86YV5 1406 aa20.02■□□□□ 0.79
CHEK2-216ENST00000439200 SOS2Q07890 1332 aaPredicted RBP20.02■□□□□ 0.79
CHEK2-216ENST00000439200 PPLO60437 1756 aa20■□□□□ 0.79
CHEK2-216ENST00000439200 HFM1A2PYH4 1435 aa19.99■□□□□ 0.79
CHEK2-216ENST00000439200 RPGRIP1LQ68CZ1 1315 aa19.99■□□□□ 0.79
CHEK2-216ENST00000439200 SLC4A1APQ9BWU0 796 aaKnown RBP19.98■□□□□ 0.79
CHEK2-216ENST00000439200 COL22A1Q8NFW1 1626 aaPredicted RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms