RNA–Protein interactions for RNA: ENST00000438828.3

CARF-213, Transcript of calcium responsive transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CARF, Length 3,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARF-213ENST00000438828 U2AF1L5P0DN76 240 aaPredicted RBP15.43■□□□□ 0.06
CARF-213ENST00000438828 U2AF1Q01081 240 aaKnown RBP eCLIP15.43■□□□□ 0.06
CARF-213ENST00000438828 DNMBPQ6XZF7 1577 aa15.43■□□□□ 0.06
CARF-213ENST00000438828 ERBINQ96RT1 1412 aa15.43■□□□□ 0.06
CARF-213ENST00000438828 GCC2Q8IWJ2 1684 aa15.43■□□□□ 0.06
CARF-213ENST00000438828 CTTNBP2Q8WZ74 1663 aa15.43■□□□□ 0.06
CARF-213ENST00000438828 RRP9O43818 475 aaKnown RBP15.42■□□□□ 0.06
CARF-213ENST00000438828 PDE3AQ14432 1141 aa15.42■□□□□ 0.06
CARF-213ENST00000438828 ZNF608Q9ULD9 1512 aaPredicted RBP15.42■□□□□ 0.06
CARF-213ENST00000438828 PCDHB15Q9Y5E8 787 aa15.42■□□□□ 0.06
CARF-213ENST00000438828 CUL7Q14999 1698 aa15.42■□□□□ 0.06
CARF-213ENST00000438828 CLCN1P35523 988 aa15.41■□□□□ 0.06
CARF-213ENST00000438828 TBC1D32Q96NH3 1257 aa15.41■□□□□ 0.06
CARF-213ENST00000438828 DDX49Q9Y6V7 483 aaKnown RBP15.41■□□□□ 0.06
CARF-213ENST00000438828 LNPKQ9C0E8 428 aa15.41■□□□□ 0.06
CARF-213ENST00000438828 CAMSAP2Q08AD1 1489 aa15.41■□□□□ 0.06
CARF-213ENST00000438828 TESK2Q96S53 571 aa15.4■□□□□ 0.06
CARF-213ENST00000438828 DNTTIP2Q5QJE6 756 aaKnown RBP15.4■□□□□ 0.06
CARF-213ENST00000438828 PTMAP06454 111 aaKnown RBP15.39■□□□□ 0.05
CARF-213ENST00000438828 CFAP53Q96M91 514 aa15.39■□□□□ 0.05
CARF-213ENST00000438828 KIAA1211Q6ZU35 1233 aa15.39■□□□□ 0.05
CARF-213ENST00000438828 EIF3AQ14152 1382 aaKnown RBP15.39■□□□□ 0.05
CARF-213ENST00000438828 C9orf84Q5VXU9 1444 aa15.39■□□□□ 0.05
CARF-213ENST00000438828 FOXD4L5Q5VV16 416 aaPredicted RBP15.38■□□□□ 0.05
CARF-213ENST00000438828 TCP11L2Q8N4U5 519 aa15.38■□□□□ 0.05
CARF-213ENST00000438828 FOXD4L4Q8WXT5 416 aaPredicted RBP15.38■□□□□ 0.05
CARF-213ENST00000438828 WWC1Q8IX03 1113 aa15.37■□□□□ 0.05
CARF-213ENST00000438828 USP19O94966 1318 aa15.37■□□□□ 0.05
CARF-213ENST00000438828 RLBP1P12271 317 aa15.37■□□□□ 0.05
CARF-213ENST00000438828 R3HCC1Q9Y3T6 440 aaKnown RBP15.37■□□□□ 0.05
CARF-213ENST00000438828 KDM5CP41229 1560 aa15.37■□□□□ 0.05
CARF-213ENST00000438828 NKTRP30414 1462 aaKnown RBP15.37■□□□□ 0.05
CARF-213ENST00000438828 NPM1P06748 294 aaKnown RBP eCLIP15.36■□□□□ 0.05
CARF-213ENST00000438828 APBB1O00213 710 aa15.36■□□□□ 0.05
CARF-213ENST00000438828 SAFB2Q14151 953 aaKnown RBP eCLIP15.36■□□□□ 0.05
CARF-213ENST00000438828 ZKSCAN2Q63HK3 967 aa15.36■□□□□ 0.05
CARF-213ENST00000438828 DZIP1LQ8IYY4 767 aaKnown RBP15.36■□□□□ 0.05
CARF-213ENST00000438828 TSR2Q969E8 191 aaKnown RBP15.36■□□□□ 0.05
CARF-213ENST00000438828 NASPP49321 788 aaPredicted RBP15.35■□□□□ 0.05
CARF-213ENST00000438828 PLEKHH2Q8IVE3 1493 aa15.34■□□□□ 0.05
CARF-213ENST00000438828 TROQ12816 1431 aaPredicted RBP15.34■□□□□ 0.05
CARF-213ENST00000438828 KIAA0586Q9BVV6 1533 aa15.34■□□□□ 0.05
CARF-213ENST00000438828 RARSP54136 660 aaKnown RBP15.34■□□□□ 0.05
CARF-213ENST00000438828 AMER1Q5JTC6 1135 aaPredicted RBP15.34■□□□□ 0.05
CARF-213ENST00000438828 ABCA5Q8WWZ7 1642 aa15.34■□□□□ 0.05
CARF-213ENST00000438828 KIF14Q15058 1648 aa15.33■□□□□ 0.05
CARF-213ENST00000438828 BLMP54132 1417 aaPredicted RBP15.33■□□□□ 0.04
CARF-213ENST00000438828 ANKRD45Q5TZF3 282 aa15.33■□□□□ 0.04
CARF-213ENST00000438828 CALD1Q05682 793 aaKnown RBP15.32■□□□□ 0.04
CARF-213ENST00000438828 TNPO1Q92973 898 aaKnown RBP15.32■□□□□ 0.04
CARF-213ENST00000438828 ANTXR1Q9H6X2 564 aa15.32■□□□□ 0.04
CARF-213ENST00000438828 ZMYM4Q5VZL5 1548 aa15.32■□□□□ 0.04
CARF-213ENST00000438828 PLCB2Q00722 1185 aa15.31■□□□□ 0.04
CARF-213ENST00000438828 CARMIL2Q6F5E8 1435 aa15.31■□□□□ 0.04
CARF-213ENST00000438828 FOXD4L6Q3SYB3 417 aaPredicted RBP15.31■□□□□ 0.04
CARF-213ENST00000438828 FOXD4L3Q6VB84 417 aaPredicted RBP15.31■□□□□ 0.04
CARF-213ENST00000438828 IQGAP2Q13576 1575 aa15.3■□□□□ 0.04
CARF-213ENST00000438828 A0A0U1RQG5 324 aaPredicted RBP15.3■□□□□ 0.04
CARF-213ENST00000438828 ELL2O00472 640 aaPredicted RBP15.3■□□□□ 0.04
CARF-213ENST00000438828 MPNDQ8N594 471 aa15.3■□□□□ 0.04
CARF-213ENST00000438828 TRAK1Q9UPV9 953 aa15.3■□□□□ 0.04
CARF-213ENST00000438828 MRC2Q9UBG0 1479 aa15.3■□□□□ 0.04
CARF-213ENST00000438828 MCTP1Q6DN14 999 aa15.3■□□□□ 0.04
CARF-213ENST00000438828 SAMD9Q5K651 1589 aa15.3■□□□□ 0.04
CARF-213ENST00000438828 UHRF1BP1Q6BDS2 1440 aa15.3■□□□□ 0.04
CARF-213ENST00000438828 RUNDC1Q96C34 613 aa15.3■□□□□ 0.04
CARF-213ENST00000438828 PLB1Q6P1J6 1458 aa15.29■□□□□ 0.04
CARF-213ENST00000438828 CAVIN1Q6NZI2 390 aaKnown RBP15.29■□□□□ 0.04
CARF-213ENST00000438828 LRRIQ1Q96JM4 1722 aa15.29■□□□□ 0.04
CARF-213ENST00000438828 ARHGEF11O15085 1522 aa15.29■□□□□ 0.04
CARF-213ENST00000438828 PRAG1Q86YV5 1406 aa15.29■□□□□ 0.04
CARF-213ENST00000438828 MBD5Q9P267 1494 aa15.29■□□□□ 0.04
CARF-213ENST00000438828 MTHFSP49914 203 aa15.28■□□□□ 0.04
CARF-213ENST00000438828 SKOR2Q2VWA4 1001 aaPredicted RBP15.28■□□□□ 0.04
CARF-213ENST00000438828 CFAP70Q5T0N1 1121 aa15.28■□□□□ 0.04
CARF-213ENST00000438828 DNMT1P26358 1616 aaKnown RBP15.28■□□□□ 0.04
CARF-213ENST00000438828 MVPQ14764 893 aaKnown RBP15.28■□□□□ 0.04
CARF-213ENST00000438828 GPATCH8Q9UKJ3 1502 aaKnown RBP15.28■□□□□ 0.04
CARF-213ENST00000438828 TPM2P07951 284 aa15.28■□□□□ 0.04
CARF-213ENST00000438828 C1orf115Q9H7X2 142 aa15.28■□□□□ 0.04
CARF-213ENST00000438828 EXOSC9Q06265 439 aaKnown RBP15.27■□□□□ 0.04
CARF-213ENST00000438828 RNF214Q8ND24 703 aa15.27■□□□□ 0.04
CARF-213ENST00000438828 NOL8Q76FK4 1167 aaKnown RBP15.27■□□□□ 0.03
CARF-213ENST00000438828 ERBB4Q15303 1308 aa15.26■□□□□ 0.03
CARF-213ENST00000438828 LAMC3Q9Y6N6 1575 aa15.26■□□□□ 0.03
CARF-213ENST00000438828 SSFA2P28290 1259 aa15.26■□□□□ 0.03
CARF-213ENST00000438828 GAS2L3Q86XJ1 694 aa15.26■□□□□ 0.03
CARF-213ENST00000438828 NUP153P49790 1475 aaKnown RBP15.25■□□□□ 0.03
CARF-213ENST00000438828 FSD2A1L4K1 749 aa15.25■□□□□ 0.03
CARF-213ENST00000438828 NUTM2DQ5VT03 806 aaPredicted RBP15.25■□□□□ 0.03
CARF-213ENST00000438828 SLC12A5Q9H2X9 1139 aa15.25■□□□□ 0.03
CARF-213ENST00000438828 DDX19BQ9UMR2 479 aa15.25■□□□□ 0.03
CARF-213ENST00000438828 PTPRGP23470 1445 aa15.25■□□□□ 0.03
CARF-213ENST00000438828 XPCQ01831 940 aaPredicted RBP15.25■□□□□ 0.03
CARF-213ENST00000438828 RBM42Q9BTD8 480 aaKnown RBP15.25■□□□□ 0.03
CARF-213ENST00000438828 PRDM10Q9NQV6 1147 aa15.24■□□□□ 0.03
CARF-213ENST00000438828 ZNF521Q96K83 1311 aa15.24■□□□□ 0.03
CARF-213ENST00000438828 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.24■□□□□ 0.03
CARF-213ENST00000438828 COL17A1Q9UMD9 1497 aaPredicted RBP15.23■□□□□ 0.03
CARF-213ENST00000438828 CCDC173Q0VFZ6 552 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms