RNA–Protein interactions for RNA: ENST00000438825.5

TMEM39B-202, Transcript of transmembrane protein 39B, humanhuman

TSL 5

Gene TMEM39B, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-202ENST00000438825 BCANQ96GW7 911 aa24.4■■□□□ 1.5
TMEM39B-202ENST00000438825 RIMS2Q9UQ26 1411 aa24.4■■□□□ 1.5
TMEM39B-202ENST00000438825 PLEKHG1Q9ULL1 1385 aa24.4■■□□□ 1.5
TMEM39B-202ENST00000438825 NKTRP30414 1462 aaKnown RBP24.39■■□□□ 1.5
TMEM39B-202ENST00000438825 SOCS7O14512 581 aa24.39■■□□□ 1.49
TMEM39B-202ENST00000438825 PPP1R15AO75807 674 aaPredicted RBP24.39■■□□□ 1.49
TMEM39B-202ENST00000438825 PPARGC1BQ86YN6 1023 aaKnown RBP24.39■■□□□ 1.49
TMEM39B-202ENST00000438825 NWD1Q149M9 1564 aa24.38■■□□□ 1.49
TMEM39B-202ENST00000438825 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.38■■□□□ 1.49
TMEM39B-202ENST00000438825 TMEM94Q12767 1356 aa24.38■■□□□ 1.49
TMEM39B-202ENST00000438825 XIRP1Q702N8 1843 aaKnown RBP24.37■■□□□ 1.49
TMEM39B-202ENST00000438825 MED1Q15648 1581 aaPredicted RBP24.37■■□□□ 1.49
TMEM39B-202ENST00000438825 RRBP1Q9P2E9 1410 aaKnown RBP24.35■■□□□ 1.49
TMEM39B-202ENST00000438825 CHGAP10645 457 aaKnown RBP24.34■■□□□ 1.49
TMEM39B-202ENST00000438825 PROSER2Q86WR7 435 aaPredicted RBP24.34■■□□□ 1.49
TMEM39B-202ENST00000438825 MYO5BQ9ULV0 1848 aa24.33■■□□□ 1.49
TMEM39B-202ENST00000438825 FAM135BQ49AJ0 1406 aa24.31■■□□□ 1.48
TMEM39B-202ENST00000438825 TBX22Q9Y458 520 aa24.3■■□□□ 1.48
TMEM39B-202ENST00000438825 DIP2AQ14689 1571 aa24.29■■□□□ 1.48
TMEM39B-202ENST00000438825 MSH6P52701 1360 aa24.28■■□□□ 1.48
TMEM39B-202ENST00000438825 SENP3Q9H4L4 574 aaPredicted RBP24.25■■□□□ 1.47
TMEM39B-202ENST00000438825 CHD2O14647 1828 aaKnown RBP24.25■■□□□ 1.47
TMEM39B-202ENST00000438825 PIK3R4Q99570 1358 aa24.25■■□□□ 1.47
TMEM39B-202ENST00000438825 PHF23Q9BUL5 403 aaPredicted RBP24.24■■□□□ 1.47
TMEM39B-202ENST00000438825 ADAMTS13Q76LX8 1427 aa24.24■■□□□ 1.47
TMEM39B-202ENST00000438825 NCOA3Q9Y6Q9 1424 aa24.24■■□□□ 1.47
TMEM39B-202ENST00000438825 SPHKAPQ2M3C7 1700 aa24.24■■□□□ 1.47
TMEM39B-202ENST00000438825 NAIPQ13075 1403 aa24.23■■□□□ 1.47
TMEM39B-202ENST00000438825 RBM33Q96EV2 1170 aaKnown RBP24.21■■□□□ 1.47
TMEM39B-202ENST00000438825 NUTM2DQ5VT03 806 aaPredicted RBP24.2■■□□□ 1.46
TMEM39B-202ENST00000438825 TRPM2O94759 1503 aa24.2■■□□□ 1.46
TMEM39B-202ENST00000438825 ROBO1Q9Y6N7 1651 aa24.19■■□□□ 1.46
TMEM39B-202ENST00000438825 HFM1A2PYH4 1435 aa24.18■■□□□ 1.46
TMEM39B-202ENST00000438825 SLAIN2Q9P270 581 aa24.16■■□□□ 1.46
TMEM39B-202ENST00000438825 ZNF326Q5BKZ1 582 aaKnown RBP24.15■■□□□ 1.46
TMEM39B-202ENST00000438825 SETBP1Q9Y6X0 1596 aa24.14■■□□□ 1.45
TMEM39B-202ENST00000438825 C14orf37Q86TY3 774 aa24.13■■□□□ 1.45
TMEM39B-202ENST00000438825 CLTCL1P53675 1640 aa24.11■■□□□ 1.45
TMEM39B-202ENST00000438825 CADPS2Q86UW7 1296 aa24.1■■□□□ 1.45
TMEM39B-202ENST00000438825 C19orf44Q9H6X5 657 aa24.1■■□□□ 1.45
TMEM39B-202ENST00000438825 AMOTL2Q9Y2J4 779 aa24.1■■□□□ 1.45
TMEM39B-202ENST00000438825 TRIM52Q96A61 297 aa24.09■■□□□ 1.45
TMEM39B-202ENST00000438825 NRXN3Q9Y4C0 1643 aa24.09■■□□□ 1.45
TMEM39B-202ENST00000438825 NEXMIFQ5QGS0 1516 aa24.07■■□□□ 1.44
TMEM39B-202ENST00000438825 ATF3P18847 181 aa24.07■■□□□ 1.44
TMEM39B-202ENST00000438825 PTPRUQ92729 1446 aa24.07■■□□□ 1.44
TMEM39B-202ENST00000438825 XRN1Q8IZH2 1706 aaKnown RBP24.05■■□□□ 1.44
TMEM39B-202ENST00000438825 DCCP43146 1447 aa24.05■■□□□ 1.44
TMEM39B-202ENST00000438825 KIF1BO60333 1816 aa24.05■■□□□ 1.44
TMEM39B-202ENST00000438825 PHLPP1O60346 1717 aa24.04■■□□□ 1.44
TMEM39B-202ENST00000438825 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.04■■□□□ 1.44
TMEM39B-202ENST00000438825 SLC4A1APQ9BWU0 796 aaKnown RBP24.04■■□□□ 1.44
TMEM39B-202ENST00000438825 JCADQ9P266 1359 aa24.03■■□□□ 1.44
TMEM39B-202ENST00000438825 METP08581 1390 aa24.01■■□□□ 1.43
TMEM39B-202ENST00000438825 VGFO15240 615 aaPredicted RBP24■■□□□ 1.43
TMEM39B-202ENST00000438825 RPGRIP1LQ68CZ1 1315 aa24■■□□□ 1.43
TMEM39B-202ENST00000438825 COL16A1Q07092 1604 aaPredicted RBP23.98■■□□□ 1.43
TMEM39B-202ENST00000438825 AHDC1Q5TGY3 1603 aaPredicted RBP23.98■■□□□ 1.43
TMEM39B-202ENST00000438825 RGS17Q9UGC6 210 aaPredicted RBP23.97■■□□□ 1.43
TMEM39B-202ENST00000438825 ACIN1Q9UKV3 1341 aaKnown RBP23.94■■□□□ 1.42
TMEM39B-202ENST00000438825 ADGRL3Q9HAR2 1447 aa23.93■■□□□ 1.42
TMEM39B-202ENST00000438825 SPATA31A6Q5VVP1 1343 aa23.93■■□□□ 1.42
TMEM39B-202ENST00000438825 BRINP3Q76B58 766 aa23.92■■□□□ 1.42
TMEM39B-202ENST00000438825 PTCH1Q13635 1447 aa23.92■■□□□ 1.42
TMEM39B-202ENST00000438825 MST1RQ04912 1400 aa23.91■■□□□ 1.42
TMEM39B-202ENST00000438825 CCDC144AA2RUR9 1427 aa23.9■■□□□ 1.42
TMEM39B-202ENST00000438825 PRAG1Q86YV5 1406 aa23.89■■□□□ 1.41
TMEM39B-202ENST00000438825 ASXL1Q8IXJ9 1541 aa23.89■■□□□ 1.41
TMEM39B-202ENST00000438825 SHPRHQ149N8 1683 aa23.87■■□□□ 1.41
TMEM39B-202ENST00000438825 PPLO60437 1756 aa23.87■■□□□ 1.41
TMEM39B-202ENST00000438825 SETD1AO15047 1707 aaKnown RBP23.87■■□□□ 1.41
TMEM39B-202ENST00000438825 FOXD1Q16676 465 aa23.85■■□□□ 1.41
TMEM39B-202ENST00000438825 MPHOSPH9Q99550 1183 aa23.85■■□□□ 1.41
TMEM39B-202ENST00000438825 NALCNQ8IZF0 1738 aa23.84■■□□□ 1.41
TMEM39B-202ENST00000438825 POTEAQ6S8J7 498 aa23.84■■□□□ 1.41
TMEM39B-202ENST00000438825 SETD5Q9C0A6 1442 aa23.83■■□□□ 1.4
TMEM39B-202ENST00000438825 ANKRD30BQ9BXX2 1392 aa23.82■■□□□ 1.4
TMEM39B-202ENST00000438825 MEX3CQ5U5Q3 659 aaKnown RBP23.82■■□□□ 1.4
TMEM39B-202ENST00000438825 LRP6O75581 1613 aa23.81■■□□□ 1.4
TMEM39B-202ENST00000438825 NHSL1Q5SYE7 1610 aa23.81■■□□□ 1.4
TMEM39B-202ENST00000438825 ROBO2Q9HCK4 1378 aa23.81■■□□□ 1.4
TMEM39B-202ENST00000438825 SPATA31E1Q6ZUB1 1445 aa23.81■■□□□ 1.4
TMEM39B-202ENST00000438825 LRRC59Q96AG4 307 aaKnown RBP23.79■■□□□ 1.4
TMEM39B-202ENST00000438825 C1orf167Q5SNV9 1468 aa23.78■■□□□ 1.4
TMEM39B-202ENST00000438825 ZNF772Q68DY9 489 aaPredicted RBP23.77■■□□□ 1.4
TMEM39B-202ENST00000438825 RGL3Q3MIN7 710 aa23.76■■□□□ 1.39
TMEM39B-202ENST00000438825 ADGRF5Q8IZF2 1346 aa23.75■■□□□ 1.39
TMEM39B-202ENST00000438825 IFT172Q9UG01 1749 aa23.73■■□□□ 1.39
TMEM39B-202ENST00000438825 TECPR2O15040 1411 aa23.72■■□□□ 1.39
TMEM39B-202ENST00000438825 LAMC1P11047 1609 aa23.71■■□□□ 1.39
TMEM39B-202ENST00000438825 PIK3C2GO75747 1445 aa23.71■■□□□ 1.39
TMEM39B-202ENST00000438825 CDC42BPGQ6DT37 1551 aa23.7■■□□□ 1.38
TMEM39B-202ENST00000438825 LRPPRCP42704 1394 aaKnown RBP23.7■■□□□ 1.38
TMEM39B-202ENST00000438825 NUTM2BA6NNL0 878 aaPredicted RBP23.7■■□□□ 1.38
TMEM39B-202ENST00000438825 NUTM2EB1AL46 878 aaPredicted RBP23.7■■□□□ 1.38
TMEM39B-202ENST00000438825 NUTM2AQ8IVF1 878 aaPredicted RBP23.7■■□□□ 1.38
TMEM39B-202ENST00000438825 PNPLA6Q8IY17 1366 aa23.69■■□□□ 1.38
TMEM39B-202ENST00000438825 ABCC11Q96J66 1382 aa23.68■■□□□ 1.38
TMEM39B-202ENST00000438825 DDX17Q92841 729 aaKnown RBP23.68■■□□□ 1.38
TMEM39B-202ENST00000438825 RAB3GAP2Q9H2M9 1393 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms