RNA–Protein interactions for RNA: ENST00000438470.5

TNFSF13-207, Transcript of TNF superfamily member 13, humanhuman

TSL 3

Gene TNFSF13, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-207ENST00000438470 SLC26A8Q96RN1 970 aa25.65■■□□□ 1.7
TNFSF13-207ENST00000438470 PPARGC1BQ86YN6 1023 aaKnown RBP25.64■■□□□ 1.7
TNFSF13-207ENST00000438470 NKTRP30414 1462 aaKnown RBP25.62■■□□□ 1.69
TNFSF13-207ENST00000438470 ITGAEP38570 1179 aa25.62■■□□□ 1.69
TNFSF13-207ENST00000438470 SENP3Q9H4L4 574 aaPredicted RBP25.62■■□□□ 1.69
TNFSF13-207ENST00000438470 RIMS2Q9UQ26 1411 aa25.62■■□□□ 1.69
TNFSF13-207ENST00000438470 TMEM94Q12767 1356 aa25.61■■□□□ 1.69
TNFSF13-207ENST00000438470 KCNA6P17658 529 aa25.61■■□□□ 1.69
TNFSF13-207ENST00000438470 CHD2O14647 1828 aaKnown RBP25.6■■□□□ 1.69
TNFSF13-207ENST00000438470 PLEKHG1Q9ULL1 1385 aa25.59■■□□□ 1.69
TNFSF13-207ENST00000438470 NUP155O75694 1391 aa25.57■■□□□ 1.68
TNFSF13-207ENST00000438470 BCANQ96GW7 911 aa25.57■■□□□ 1.68
TNFSF13-207ENST00000438470 SPHKAPQ2M3C7 1700 aa25.56■■□□□ 1.68
TNFSF13-207ENST00000438470 PPP1R15AO75807 674 aaPredicted RBP25.55■■□□□ 1.68
TNFSF13-207ENST00000438470 ROBO1Q9Y6N7 1651 aa25.54■■□□□ 1.68
TNFSF13-207ENST00000438470 CHGAP10645 457 aaKnown RBP25.53■■□□□ 1.68
TNFSF13-207ENST00000438470 PROSER2Q86WR7 435 aaPredicted RBP25.53■■□□□ 1.68
TNFSF13-207ENST00000438470 RBM33Q96EV2 1170 aaKnown RBP25.53■■□□□ 1.68
TNFSF13-207ENST00000438470 FAM135BQ49AJ0 1406 aa25.51■■□□□ 1.67
TNFSF13-207ENST00000438470 DIP2AQ14689 1571 aa25.51■■□□□ 1.67
TNFSF13-207ENST00000438470 HDGFP51858 240 aaKnown RBP25.5■■□□□ 1.67
TNFSF13-207ENST00000438470 RRBP1Q9P2E9 1410 aaKnown RBP25.5■■□□□ 1.67
TNFSF13-207ENST00000438470 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.48■■□□□ 1.67
TNFSF13-207ENST00000438470 ADAMTS13Q76LX8 1427 aa25.47■■□□□ 1.67
TNFSF13-207ENST00000438470 MSH6P52701 1360 aa25.46■■□□□ 1.67
TNFSF13-207ENST00000438470 NUTM2DQ5VT03 806 aaPredicted RBP25.46■■□□□ 1.67
TNFSF13-207ENST00000438470 PHF23Q9BUL5 403 aaPredicted RBP25.46■■□□□ 1.67
TNFSF13-207ENST00000438470 TBX22Q9Y458 520 aa25.44■■□□□ 1.66
TNFSF13-207ENST00000438470 TRPM2O94759 1503 aa25.42■■□□□ 1.66
TNFSF13-207ENST00000438470 NRXN3Q9Y4C0 1643 aa25.42■■□□□ 1.66
TNFSF13-207ENST00000438470 CLTCL1P53675 1640 aa25.41■■□□□ 1.66
TNFSF13-207ENST00000438470 NAIPQ13075 1403 aa25.41■■□□□ 1.66
TNFSF13-207ENST00000438470 PHLPP1O60346 1717 aa25.4■■□□□ 1.66
TNFSF13-207ENST00000438470 PIK3R4Q99570 1358 aa25.39■■□□□ 1.65
TNFSF13-207ENST00000438470 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.38■■□□□ 1.65
TNFSF13-207ENST00000438470 SETBP1Q9Y6X0 1596 aa25.38■■□□□ 1.65
TNFSF13-207ENST00000438470 KIF1BO60333 1816 aa25.37■■□□□ 1.65
TNFSF13-207ENST00000438470 NCOA3Q9Y6Q9 1424 aa25.37■■□□□ 1.65
TNFSF13-207ENST00000438470 XRN1Q8IZH2 1706 aaKnown RBP25.36■■□□□ 1.65
TNFSF13-207ENST00000438470 PTPRUQ92729 1446 aa25.34■■□□□ 1.65
TNFSF13-207ENST00000438470 SLAIN2Q9P270 581 aa25.33■■□□□ 1.65
TNFSF13-207ENST00000438470 NEXMIFQ5QGS0 1516 aa25.32■■□□□ 1.64
TNFSF13-207ENST00000438470 HFM1A2PYH4 1435 aa25.31■■□□□ 1.64
TNFSF13-207ENST00000438470 COL16A1Q07092 1604 aaPredicted RBP25.31■■□□□ 1.64
TNFSF13-207ENST00000438470 C14orf37Q86TY3 774 aa25.31■■□□□ 1.64
TNFSF13-207ENST00000438470 ZNF326Q5BKZ1 582 aaKnown RBP25.29■■□□□ 1.64
TNFSF13-207ENST00000438470 RGS17Q9UGC6 210 aaPredicted RBP25.27■■□□□ 1.64
TNFSF13-207ENST00000438470 AMOTL2Q9Y2J4 779 aa25.27■■□□□ 1.64
TNFSF13-207ENST00000438470 AHDC1Q5TGY3 1603 aaPredicted RBP25.24■■□□□ 1.63
TNFSF13-207ENST00000438470 C19orf44Q9H6X5 657 aa25.24■■□□□ 1.63
TNFSF13-207ENST00000438470 METP08581 1390 aa25.23■■□□□ 1.63
TNFSF13-207ENST00000438470 CADPS2Q86UW7 1296 aa25.23■■□□□ 1.63
TNFSF13-207ENST00000438470 JCADQ9P266 1359 aa25.22■■□□□ 1.63
TNFSF13-207ENST00000438470 ATF3P18847 181 aa25.22■■□□□ 1.63
TNFSF13-207ENST00000438470 SETD1AO15047 1707 aaKnown RBP25.22■■□□□ 1.63
TNFSF13-207ENST00000438470 DCCP43146 1447 aa25.21■■□□□ 1.63
TNFSF13-207ENST00000438470 TRIM52Q96A61 297 aa25.21■■□□□ 1.63
TNFSF13-207ENST00000438470 NALCNQ8IZF0 1738 aa25.2■■□□□ 1.63
TNFSF13-207ENST00000438470 PPLO60437 1756 aa25.18■■□□□ 1.62
TNFSF13-207ENST00000438470 SHPRHQ149N8 1683 aa25.18■■□□□ 1.62
TNFSF13-207ENST00000438470 SLC4A1APQ9BWU0 796 aaKnown RBP25.15■■□□□ 1.62
TNFSF13-207ENST00000438470 ASXL1Q8IXJ9 1541 aa25.15■■□□□ 1.62
TNFSF13-207ENST00000438470 NHSL1Q5SYE7 1610 aa25.14■■□□□ 1.61
TNFSF13-207ENST00000438470 MST1RQ04912 1400 aa25.13■■□□□ 1.61
TNFSF13-207ENST00000438470 ADGRL3Q9HAR2 1447 aa25.13■■□□□ 1.61
TNFSF13-207ENST00000438470 LRP6O75581 1613 aa25.13■■□□□ 1.61
TNFSF13-207ENST00000438470 POTEAQ6S8J7 498 aa25.13■■□□□ 1.61
TNFSF13-207ENST00000438470 BRINP3Q76B58 766 aa25.12■■□□□ 1.61
TNFSF13-207ENST00000438470 PTCH1Q13635 1447 aa25.08■■□□□ 1.61
TNFSF13-207ENST00000438470 SPATA31A6Q5VVP1 1343 aa25.08■■□□□ 1.6
TNFSF13-207ENST00000438470 VGFO15240 615 aaPredicted RBP25.07■■□□□ 1.6
TNFSF13-207ENST00000438470 FOXD1Q16676 465 aa25.06■■□□□ 1.6
TNFSF13-207ENST00000438470 IFT172Q9UG01 1749 aa25.06■■□□□ 1.6
TNFSF13-207ENST00000438470 RPGRIP1LQ68CZ1 1315 aa25.05■■□□□ 1.6
TNFSF13-207ENST00000438470 PRAG1Q86YV5 1406 aa25.04■■□□□ 1.6
TNFSF13-207ENST00000438470 ROBO2Q9HCK4 1378 aa25.03■■□□□ 1.6
TNFSF13-207ENST00000438470 CCDC144AA2RUR9 1427 aa25.02■■□□□ 1.6
TNFSF13-207ENST00000438470 SETD5Q9C0A6 1442 aa25.02■■□□□ 1.6
TNFSF13-207ENST00000438470 MEX3CQ5U5Q3 659 aaKnown RBP25■■□□□ 1.59
TNFSF13-207ENST00000438470 LAMC1P11047 1609 aa24.98■■□□□ 1.59
TNFSF13-207ENST00000438470 C1orf167Q5SNV9 1468 aa24.98■■□□□ 1.59
TNFSF13-207ENST00000438470 SPATA31E1Q6ZUB1 1445 aa24.98■■□□□ 1.59
TNFSF13-207ENST00000438470 MPHOSPH9Q99550 1183 aa24.96■■□□□ 1.59
TNFSF13-207ENST00000438470 DDX17Q92841 729 aaKnown RBP24.95■■□□□ 1.58
TNFSF13-207ENST00000438470 CDC42BPGQ6DT37 1551 aa24.93■■□□□ 1.58
TNFSF13-207ENST00000438470 KNDC1Q76NI1 1749 aa24.92■■□□□ 1.58
TNFSF13-207ENST00000438470 ADGRF5Q8IZF2 1346 aa24.92■■□□□ 1.58
TNFSF13-207ENST00000438470 NUTM2BA6NNL0 878 aaPredicted RBP24.92■■□□□ 1.58
TNFSF13-207ENST00000438470 NUTM2EB1AL46 878 aaPredicted RBP24.92■■□□□ 1.58
TNFSF13-207ENST00000438470 NUTM2AQ8IVF1 878 aaPredicted RBP24.92■■□□□ 1.58
TNFSF13-207ENST00000438470 PNPLA6Q8IY17 1366 aa24.92■■□□□ 1.58
TNFSF13-207ENST00000438470 RGL3Q3MIN7 710 aa24.91■■□□□ 1.58
TNFSF13-207ENST00000438470 ZNF772Q68DY9 489 aaPredicted RBP24.91■■□□□ 1.58
TNFSF13-207ENST00000438470 LRRC59Q96AG4 307 aaKnown RBP24.91■■□□□ 1.58
TNFSF13-207ENST00000438470 ANKRD30BQ9BXX2 1392 aa24.9■■□□□ 1.58
TNFSF13-207ENST00000438470 PIK3C2GO75747 1445 aa24.88■■□□□ 1.57
TNFSF13-207ENST00000438470 TECPR2O15040 1411 aa24.87■■□□□ 1.57
TNFSF13-207ENST00000438470 ORAI2Q96SN7 254 aa24.86■■□□□ 1.57
TNFSF13-207ENST00000438470 AFF2P51816 1311 aa24.84■■□□□ 1.57
TNFSF13-207ENST00000438470 LRPPRCP42704 1394 aaKnown RBP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms