RNA–Protein interactions for RNA: ENST00000438067.5

PTCH2-202, Transcript of patched 2, humanhuman

TSL 3

Gene PTCH2, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-202ENST00000438067 RPRD2Q5VT52 1461 aaKnown RBP26.83■■□□□ 1.89
PTCH2-202ENST00000438067 HDGFP51858 240 aaKnown RBP26.79■■□□□ 1.88
PTCH2-202ENST00000438067 NKTRP30414 1462 aaKnown RBP26.77■■□□□ 1.88
PTCH2-202ENST00000438067 ZFYVE9O95405 1425 aa26.77■■□□□ 1.88
PTCH2-202ENST00000438067 PLEKHG1Q9ULL1 1385 aa26.76■■□□□ 1.87
PTCH2-202ENST00000438067 PPP1R15AO75807 674 aaPredicted RBP26.76■■□□□ 1.87
PTCH2-202ENST00000438067 RIMS2Q9UQ26 1411 aa26.74■■□□□ 1.87
PTCH2-202ENST00000438067 MSH6P52701 1360 aa26.74■■□□□ 1.87
PTCH2-202ENST00000438067 SLAIN2Q9P270 581 aa26.74■■□□□ 1.87
PTCH2-202ENST00000438067 NWD1Q149M9 1564 aa26.74■■□□□ 1.87
PTCH2-202ENST00000438067 CHGAP10645 457 aaKnown RBP26.72■■□□□ 1.87
PTCH2-202ENST00000438067 TBX22Q9Y458 520 aa26.72■■□□□ 1.87
PTCH2-202ENST00000438067 ROBO1Q9Y6N7 1651 aa26.7■■□□□ 1.87
PTCH2-202ENST00000438067 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.7■■□□□ 1.86
PTCH2-202ENST00000438067 POTEAQ6S8J7 498 aa26.68■■□□□ 1.86
PTCH2-202ENST00000438067 TMEM131LA2VDJ0 1609 aa26.68■■□□□ 1.86
PTCH2-202ENST00000438067 ROCK1Q13464 1354 aa26.67■■□□□ 1.86
PTCH2-202ENST00000438067 NUTM2DQ5VT03 806 aaPredicted RBP26.66■■□□□ 1.86
PTCH2-202ENST00000438067 UNC13BO14795 1591 aa26.64■■□□□ 1.86
PTCH2-202ENST00000438067 GCC2Q8IWJ2 1684 aa26.63■■□□□ 1.85
PTCH2-202ENST00000438067 ADAMTS13Q76LX8 1427 aa26.62■■□□□ 1.85
PTCH2-202ENST00000438067 NCOA3Q9Y6Q9 1424 aa26.62■■□□□ 1.85
PTCH2-202ENST00000438067 MYO5BQ9ULV0 1848 aa26.62■■□□□ 1.85
PTCH2-202ENST00000438067 CHD2O14647 1828 aaKnown RBP26.61■■□□□ 1.85
PTCH2-202ENST00000438067 NUP155O75694 1391 aa26.6■■□□□ 1.85
PTCH2-202ENST00000438067 C14orf37Q86TY3 774 aa26.6■■□□□ 1.85
PTCH2-202ENST00000438067 JCADQ9P266 1359 aa26.59■■□□□ 1.85
PTCH2-202ENST00000438067 E9PCH4 1651 aa26.58■■□□□ 1.85
PTCH2-202ENST00000438067 ITGAEP38570 1179 aa26.58■■□□□ 1.85
PTCH2-202ENST00000438067 PIK3R4Q99570 1358 aa26.58■■□□□ 1.84
PTCH2-202ENST00000438067 C19orf44Q9H6X5 657 aa26.57■■□□□ 1.84
PTCH2-202ENST00000438067 CADPS2Q86UW7 1296 aa26.56■■□□□ 1.84
PTCH2-202ENST00000438067 IQGAP3Q86VI3 1631 aa26.54■■□□□ 1.84
PTCH2-202ENST00000438067 ATF3P18847 181 aa26.54■■□□□ 1.84
PTCH2-202ENST00000438067 AMOTL2Q9Y2J4 779 aa26.54■■□□□ 1.84
PTCH2-202ENST00000438067 PHLPP1O60346 1717 aa26.53■■□□□ 1.84
PTCH2-202ENST00000438067 DIP2AQ14689 1571 aa26.51■■□□□ 1.83
PTCH2-202ENST00000438067 PPARGC1BQ86YN6 1023 aaKnown RBP26.49■■□□□ 1.83
PTCH2-202ENST00000438067 PTPRUQ92729 1446 aa26.48■■□□□ 1.83
PTCH2-202ENST00000438067 COL16A1Q07092 1604 aaPredicted RBP26.47■■□□□ 1.83
PTCH2-202ENST00000438067 SPATA31A6Q5VVP1 1343 aa26.47■■□□□ 1.83
PTCH2-202ENST00000438067 TRPM2O94759 1503 aa26.45■■□□□ 1.83
PTCH2-202ENST00000438067 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.45■■□□□ 1.82
PTCH2-202ENST00000438067 ZNF326Q5BKZ1 582 aaKnown RBP26.43■■□□□ 1.82
PTCH2-202ENST00000438067 BRINP3Q76B58 766 aa26.43■■□□□ 1.82
PTCH2-202ENST00000438067 LRP6O75581 1613 aa26.41■■□□□ 1.82
PTCH2-202ENST00000438067 MEX3CQ5U5Q3 659 aaKnown RBP26.41■■□□□ 1.82
PTCH2-202ENST00000438067 AHDC1Q5TGY3 1603 aaPredicted RBP26.4■■□□□ 1.82
PTCH2-202ENST00000438067 METP08581 1390 aa26.38■■□□□ 1.81
PTCH2-202ENST00000438067 ZNF772Q68DY9 489 aaPredicted RBP26.38■■□□□ 1.81
PTCH2-202ENST00000438067 DCCP43146 1447 aa26.37■■□□□ 1.81
PTCH2-202ENST00000438067 SETBP1Q9Y6X0 1596 aa26.37■■□□□ 1.81
PTCH2-202ENST00000438067 NRXN3Q9Y4C0 1643 aa26.34■■□□□ 1.81
PTCH2-202ENST00000438067 NUTM2BA6NNL0 878 aaPredicted RBP26.32■■□□□ 1.8
PTCH2-202ENST00000438067 NUTM2EB1AL46 878 aaPredicted RBP26.32■■□□□ 1.8
PTCH2-202ENST00000438067 NUTM2AQ8IVF1 878 aaPredicted RBP26.32■■□□□ 1.8
PTCH2-202ENST00000438067 MST1RQ04912 1400 aa26.31■■□□□ 1.8
PTCH2-202ENST00000438067 SPHKAPQ2M3C7 1700 aa26.31■■□□□ 1.8
PTCH2-202ENST00000438067 XRN1Q8IZH2 1706 aaKnown RBP26.31■■□□□ 1.8
PTCH2-202ENST00000438067 SHPRHQ149N8 1683 aa26.29■■□□□ 1.8
PTCH2-202ENST00000438067 ASXL1Q8IXJ9 1541 aa26.29■■□□□ 1.8
PTCH2-202ENST00000438067 TRIM52Q96A61 297 aa26.28■■□□□ 1.8
PTCH2-202ENST00000438067 SETD5Q9C0A6 1442 aa26.28■■□□□ 1.8
PTCH2-202ENST00000438067 LRRC59Q96AG4 307 aaKnown RBP26.27■■□□□ 1.8
PTCH2-202ENST00000438067 SETD1AO15047 1707 aaKnown RBP26.27■■□□□ 1.8
PTCH2-202ENST00000438067 RXRBP28702 533 aa26.26■■□□□ 1.79
PTCH2-202ENST00000438067 NAIPQ13075 1403 aa26.25■■□□□ 1.79
PTCH2-202ENST00000438067 ADGRL3Q9HAR2 1447 aa26.25■■□□□ 1.79
PTCH2-202ENST00000438067 DDX17Q92841 729 aaKnown RBP26.25■■□□□ 1.79
PTCH2-202ENST00000438067 CLTCL1P53675 1640 aa26.25■■□□□ 1.79
PTCH2-202ENST00000438067 NEXMIFQ5QGS0 1516 aa26.24■■□□□ 1.79
PTCH2-202ENST00000438067 RRBP1Q9P2E9 1410 aaKnown RBP26.23■■□□□ 1.79
PTCH2-202ENST00000438067 UPF1Q92900 1129 aaKnown RBP eCLIP26.23■■□□□ 1.79
PTCH2-202ENST00000438067 VGFO15240 615 aaPredicted RBP26.22■■□□□ 1.79
PTCH2-202ENST00000438067 AFF2P51816 1311 aa26.21■■□□□ 1.79
PTCH2-202ENST00000438067 PNPLA6Q8IY17 1366 aa26.17■■□□□ 1.78
PTCH2-202ENST00000438067 NHSL1Q5SYE7 1610 aa26.17■■□□□ 1.78
PTCH2-202ENST00000438067 C1orf167Q5SNV9 1468 aa26.16■■□□□ 1.78
PTCH2-202ENST00000438067 RPGRIP1LQ68CZ1 1315 aa26.15■■□□□ 1.78
PTCH2-202ENST00000438067 C8orf37Q96NL8 207 aa26.15■■□□□ 1.78
PTCH2-202ENST00000438067 ROBO2Q9HCK4 1378 aa26.15■■□□□ 1.78
PTCH2-202ENST00000438067 SLC4A1APQ9BWU0 796 aaKnown RBP26.14■■□□□ 1.78
PTCH2-202ENST00000438067 CDK12Q9NYV4 1490 aaPredicted RBP26.13■■□□□ 1.77
PTCH2-202ENST00000438067 ORAI2Q96SN7 254 aa26.13■■□□□ 1.77
PTCH2-202ENST00000438067 PTCH1Q13635 1447 aa26.13■■□□□ 1.77
PTCH2-202ENST00000438067 NALCNQ8IZF0 1738 aa26.12■■□□□ 1.77
PTCH2-202ENST00000438067 QTRT2Q9H974 415 aaKnown RBP26.12■■□□□ 1.77
PTCH2-202ENST00000438067 HFM1A2PYH4 1435 aa26.11■■□□□ 1.77
PTCH2-202ENST00000438067 KIF1BO60333 1816 aa26.11■■□□□ 1.77
PTCH2-202ENST00000438067 ADAMTS2O95450 1211 aa26.09■■□□□ 1.77
PTCH2-202ENST00000438067 SOS2Q07890 1332 aaPredicted RBP26.09■■□□□ 1.77
PTCH2-202ENST00000438067 RBM6P78332 1123 aaKnown RBP26.08■■□□□ 1.77
PTCH2-202ENST00000438067 NGLY1Q96IV0 654 aa26.08■■□□□ 1.77
PTCH2-202ENST00000438067 PRAG1Q86YV5 1406 aa26.06■■□□□ 1.76
PTCH2-202ENST00000438067 FOXD1Q16676 465 aa26.03■■□□□ 1.76
PTCH2-202ENST00000438067 RGS12O14924 1447 aa26.01■■□□□ 1.75
PTCH2-202ENST00000438067 LAMC1P11047 1609 aa26.01■■□□□ 1.75
PTCH2-202ENST00000438067 ADGRF5Q8IZF2 1346 aa25.99■■□□□ 1.75
PTCH2-202ENST00000438067 ESCO1Q5FWF5 840 aa25.98■■□□□ 1.75
PTCH2-202ENST00000438067 USP21Q9UK80 565 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms