RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 KCNA6P17658 529 aa22.17■■□□□ 1.14
TNFRSF1A-203ENST00000437813 SLC26A8Q96RN1 970 aa22.17■■□□□ 1.14
TNFRSF1A-203ENST00000437813 NKTRP30414 1462 aaKnown RBP22.16■■□□□ 1.14
TNFRSF1A-203ENST00000437813 RRBP1Q9P2E9 1410 aaKnown RBP22.16■■□□□ 1.14
TNFRSF1A-203ENST00000437813 RIMS2Q9UQ26 1411 aa22.16■■□□□ 1.14
TNFRSF1A-203ENST00000437813 SOCS7O14512 581 aa22.16■■□□□ 1.14
TNFRSF1A-203ENST00000437813 TMEM94Q12767 1356 aa22.15■■□□□ 1.14
TNFRSF1A-203ENST00000437813 PPARGC1BQ86YN6 1023 aaKnown RBP22.15■■□□□ 1.14
TNFRSF1A-203ENST00000437813 CHD2O14647 1828 aaKnown RBP22.15■■□□□ 1.14
TNFRSF1A-203ENST00000437813 NUP155O75694 1391 aa22.12■■□□□ 1.13
TNFRSF1A-203ENST00000437813 FAM135BQ49AJ0 1406 aa22.11■■□□□ 1.13
TNFRSF1A-203ENST00000437813 ADAMTS13Q76LX8 1427 aa22.11■■□□□ 1.13
TNFRSF1A-203ENST00000437813 ITGAEP38570 1179 aa22.08■■□□□ 1.13
TNFRSF1A-203ENST00000437813 SPHKAPQ2M3C7 1700 aa22.07■■□□□ 1.12
TNFRSF1A-203ENST00000437813 TBX22Q9Y458 520 aa22.06■■□□□ 1.12
TNFRSF1A-203ENST00000437813 DIP2AQ14689 1571 aa22.06■■□□□ 1.12
TNFRSF1A-203ENST00000437813 NAIPQ13075 1403 aa22.06■■□□□ 1.12
TNFRSF1A-203ENST00000437813 PROSER2Q86WR7 435 aaPredicted RBP22.05■■□□□ 1.12
TNFRSF1A-203ENST00000437813 RBM33Q96EV2 1170 aaKnown RBP22.04■■□□□ 1.12
TNFRSF1A-203ENST00000437813 ROBO1Q9Y6N7 1651 aa22.04■■□□□ 1.12
TNFRSF1A-203ENST00000437813 HDGFP51858 240 aaKnown RBP22.03■■□□□ 1.12
TNFRSF1A-203ENST00000437813 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.03■■□□□ 1.12
TNFRSF1A-203ENST00000437813 NRXN3Q9Y4C0 1643 aa22.02■■□□□ 1.12
TNFRSF1A-203ENST00000437813 PIK3R4Q99570 1358 aa22■■□□□ 1.11
TNFRSF1A-203ENST00000437813 NCOA3Q9Y6Q9 1424 aa22■■□□□ 1.11
TNFRSF1A-203ENST00000437813 PPP1R15AO75807 674 aaPredicted RBP21.99■■□□□ 1.11
TNFRSF1A-203ENST00000437813 SENP3Q9H4L4 574 aaPredicted RBP21.99■■□□□ 1.11
TNFRSF1A-203ENST00000437813 SETBP1Q9Y6X0 1596 aa21.99■■□□□ 1.11
TNFRSF1A-203ENST00000437813 CLTCL1P53675 1640 aa21.98■■□□□ 1.11
TNFRSF1A-203ENST00000437813 TRPM2O94759 1503 aa21.98■■□□□ 1.11
TNFRSF1A-203ENST00000437813 CHGAP10645 457 aaKnown RBP21.98■■□□□ 1.11
TNFRSF1A-203ENST00000437813 NUTM2DQ5VT03 806 aaPredicted RBP21.98■■□□□ 1.11
TNFRSF1A-203ENST00000437813 PTPRUQ92729 1446 aa21.97■■□□□ 1.11
TNFRSF1A-203ENST00000437813 HFM1A2PYH4 1435 aa21.97■■□□□ 1.11
TNFRSF1A-203ENST00000437813 BCANQ96GW7 911 aa21.96■■□□□ 1.11
TNFRSF1A-203ENST00000437813 MSH6P52701 1360 aa21.96■■□□□ 1.11
TNFRSF1A-203ENST00000437813 XRN1Q8IZH2 1706 aaKnown RBP21.95■■□□□ 1.1
TNFRSF1A-203ENST00000437813 NEXMIFQ5QGS0 1516 aa21.94■■□□□ 1.1
TNFRSF1A-203ENST00000437813 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.93■■□□□ 1.1
TNFRSF1A-203ENST00000437813 SLAIN2Q9P270 581 aa21.92■■□□□ 1.1
TNFRSF1A-203ENST00000437813 RGS17Q9UGC6 210 aaPredicted RBP21.92■■□□□ 1.1
TNFRSF1A-203ENST00000437813 COL16A1Q07092 1604 aaPredicted RBP21.88■■□□□ 1.09
TNFRSF1A-203ENST00000437813 KIF1BO60333 1816 aa21.87■■□□□ 1.09
TNFRSF1A-203ENST00000437813 PHLPP1O60346 1717 aa21.87■■□□□ 1.09
TNFRSF1A-203ENST00000437813 METP08581 1390 aa21.87■■□□□ 1.09
TNFRSF1A-203ENST00000437813 AMOTL2Q9Y2J4 779 aa21.86■■□□□ 1.09
TNFRSF1A-203ENST00000437813 C19orf44Q9H6X5 657 aa21.85■■□□□ 1.09
TNFRSF1A-203ENST00000437813 SETD1AO15047 1707 aaKnown RBP21.85■■□□□ 1.09
TNFRSF1A-203ENST00000437813 DCCP43146 1447 aa21.84■■□□□ 1.09
TNFRSF1A-203ENST00000437813 PHF23Q9BUL5 403 aaPredicted RBP21.84■■□□□ 1.09
TNFRSF1A-203ENST00000437813 AHDC1Q5TGY3 1603 aaPredicted RBP21.84■■□□□ 1.09
TNFRSF1A-203ENST00000437813 ZNF326Q5BKZ1 582 aaKnown RBP21.8■■□□□ 1.08
TNFRSF1A-203ENST00000437813 CADPS2Q86UW7 1296 aa21.8■■□□□ 1.08
TNFRSF1A-203ENST00000437813 PRAG1Q86YV5 1406 aa21.79■■□□□ 1.08
TNFRSF1A-203ENST00000437813 JCADQ9P266 1359 aa21.78■■□□□ 1.08
TNFRSF1A-203ENST00000437813 PPLO60437 1756 aa21.78■■□□□ 1.08
TNFRSF1A-203ENST00000437813 MST1RQ04912 1400 aa21.77■■□□□ 1.08
TNFRSF1A-203ENST00000437813 NALCNQ8IZF0 1738 aa21.77■■□□□ 1.08
TNFRSF1A-203ENST00000437813 ADGRL3Q9HAR2 1447 aa21.75■■□□□ 1.07
TNFRSF1A-203ENST00000437813 BRINP3Q76B58 766 aa21.75■■□□□ 1.07
TNFRSF1A-203ENST00000437813 C14orf37Q86TY3 774 aa21.75■■□□□ 1.07
TNFRSF1A-203ENST00000437813 TRIM52Q96A61 297 aa21.75■■□□□ 1.07
TNFRSF1A-203ENST00000437813 SLC4A1APQ9BWU0 796 aaKnown RBP21.75■■□□□ 1.07
TNFRSF1A-203ENST00000437813 SHPRHQ149N8 1683 aa21.75■■□□□ 1.07
TNFRSF1A-203ENST00000437813 ATF3P18847 181 aa21.74■■□□□ 1.07
TNFRSF1A-203ENST00000437813 POTEAQ6S8J7 498 aa21.74■■□□□ 1.07
TNFRSF1A-203ENST00000437813 LRP6O75581 1613 aa21.73■■□□□ 1.07
TNFRSF1A-203ENST00000437813 ASXL1Q8IXJ9 1541 aa21.73■■□□□ 1.07
TNFRSF1A-203ENST00000437813 NHSL1Q5SYE7 1610 aa21.73■■□□□ 1.07
TNFRSF1A-203ENST00000437813 PTCH1Q13635 1447 aa21.72■■□□□ 1.07
TNFRSF1A-203ENST00000437813 RPGRIP1LQ68CZ1 1315 aa21.72■■□□□ 1.07
TNFRSF1A-203ENST00000437813 SPATA31E1Q6ZUB1 1445 aa21.71■■□□□ 1.07
TNFRSF1A-203ENST00000437813 VGFO15240 615 aaPredicted RBP21.7■■□□□ 1.06
TNFRSF1A-203ENST00000437813 FOXD1Q16676 465 aa21.69■■□□□ 1.06
TNFRSF1A-203ENST00000437813 ROBO2Q9HCK4 1378 aa21.69■■□□□ 1.06
TNFRSF1A-203ENST00000437813 IFT172Q9UG01 1749 aa21.69■■□□□ 1.06
TNFRSF1A-203ENST00000437813 SPATA31A6Q5VVP1 1343 aa21.68■■□□□ 1.06
TNFRSF1A-203ENST00000437813 LAMC1P11047 1609 aa21.68■■□□□ 1.06
TNFRSF1A-203ENST00000437813 SETD5Q9C0A6 1442 aa21.67■■□□□ 1.06
TNFRSF1A-203ENST00000437813 MPHOSPH9Q99550 1183 aa21.64■■□□□ 1.05
TNFRSF1A-203ENST00000437813 C1orf167Q5SNV9 1468 aa21.63■■□□□ 1.05
TNFRSF1A-203ENST00000437813 CCDC144AA2RUR9 1427 aa21.63■■□□□ 1.05
TNFRSF1A-203ENST00000437813 ADGRF5Q8IZF2 1346 aa21.61■■□□□ 1.05
TNFRSF1A-203ENST00000437813 TECPR2O15040 1411 aa21.59■■□□□ 1.05
TNFRSF1A-203ENST00000437813 ANKRD30BQ9BXX2 1392 aa21.58■■□□□ 1.04
TNFRSF1A-203ENST00000437813 PIK3C2GO75747 1445 aa21.57■■□□□ 1.04
TNFRSF1A-203ENST00000437813 DDX17Q92841 729 aaKnown RBP21.57■■□□□ 1.04
TNFRSF1A-203ENST00000437813 CDC42BPGQ6DT37 1551 aa21.57■■□□□ 1.04
TNFRSF1A-203ENST00000437813 PNPLA6Q8IY17 1366 aa21.56■■□□□ 1.04
TNFRSF1A-203ENST00000437813 KNDC1Q76NI1 1749 aa21.55■■□□□ 1.04
TNFRSF1A-203ENST00000437813 NRXN1Q9ULB1 1477 aa21.54■■□□□ 1.04
TNFRSF1A-203ENST00000437813 LRRC59Q96AG4 307 aaKnown RBP21.53■■□□□ 1.04
TNFRSF1A-203ENST00000437813 SOS2Q07890 1332 aaPredicted RBP21.53■■□□□ 1.04
TNFRSF1A-203ENST00000437813 ACIN1Q9UKV3 1341 aaKnown RBP21.53■■□□□ 1.04
TNFRSF1A-203ENST00000437813 LRPPRCP42704 1394 aaKnown RBP21.52■■□□□ 1.04
TNFRSF1A-203ENST00000437813 RGL3Q3MIN7 710 aa21.52■■□□□ 1.04
TNFRSF1A-203ENST00000437813 ORAI2Q96SN7 254 aa21.52■■□□□ 1.04
TNFRSF1A-203ENST00000437813 ABCC11Q96J66 1382 aa21.51■■□□□ 1.03
TNFRSF1A-203ENST00000437813 RAB3GAP2Q9H2M9 1393 aa21.49■■□□□ 1.03
TNFRSF1A-203ENST00000437813 MYOM2P54296 1465 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms