RNA–Protein interactions for RNA: ENST00000437800.6

CD4-202, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 2,117 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-202ENST00000437800 ZNF326Q5BKZ1 582 aaKnown RBP20.66■□□□□ 0.9
CD4-202ENST00000437800 KDM2AQ9Y2K7 1162 aa20.66■□□□□ 0.9
CD4-202ENST00000437800 PTPRMP28827 1452 aa20.66■□□□□ 0.9
CD4-202ENST00000437800 NBPF8Q3BBV2 869 aa20.66■□□□□ 0.9
CD4-202ENST00000437800 UBR1Q8IWV7 1749 aa20.65■□□□□ 0.9
CD4-202ENST00000437800 NEXMIFQ5QGS0 1516 aa20.64■□□□□ 0.89
CD4-202ENST00000437800 ERICH6Q7L0X2 663 aa20.63■□□□□ 0.89
CD4-202ENST00000437800 A2ML1A8K2U0 1454 aa20.63■□□□□ 0.89
CD4-202ENST00000437800 NLRP1Q9C000 1473 aa20.62■□□□□ 0.89
CD4-202ENST00000437800 UHRF1BP1Q6BDS2 1440 aa20.61■□□□□ 0.89
CD4-202ENST00000437800 PRAG1Q86YV5 1406 aa20.61■□□□□ 0.89
CD4-202ENST00000437800 MYOM2P54296 1465 aa20.6■□□□□ 0.89
CD4-202ENST00000437800 HIRIP3Q9BW71 556 aaPredicted RBP20.6■□□□□ 0.89
CD4-202ENST00000437800 STAG3Q9UJ98 1225 aa20.6■□□□□ 0.89
CD4-202ENST00000437800 KDM5AP29375 1690 aaKnown RBP20.6■□□□□ 0.89
CD4-202ENST00000437800 TRPM1Q7Z4N2 1603 aa20.59■□□□□ 0.89
CD4-202ENST00000437800 CEP170BQ9Y4F5 1589 aaPredicted RBP20.58■□□□□ 0.89
CD4-202ENST00000437800 NUTM2DQ5VT03 806 aaPredicted RBP20.57■□□□□ 0.88
CD4-202ENST00000437800 ZNF142P52746 1687 aaPredicted RBP20.57■□□□□ 0.88
CD4-202ENST00000437800 KDM4FA0A1W2PPD8 638 aa20.57■□□□□ 0.88
CD4-202ENST00000437800 RALGAPBQ86X10 1494 aa20.56■□□□□ 0.88
CD4-202ENST00000437800 DDX10Q13206 875 aaKnown RBP20.56■□□□□ 0.88
CD4-202ENST00000437800 CCER2I3L3R5 266 aa20.55■□□□□ 0.88
CD4-202ENST00000437800 ADGRF5Q8IZF2 1346 aa20.55■□□□□ 0.88
CD4-202ENST00000437800 NRXN1Q9ULB1 1477 aa20.54■□□□□ 0.88
CD4-202ENST00000437800 SETD1BQ9UPS6 1966 aaKnown RBP20.54■□□□□ 0.88
CD4-202ENST00000437800 RPGRIP1LQ68CZ1 1315 aa20.53■□□□□ 0.88
CD4-202ENST00000437800 ZFYVE9O95405 1425 aa20.52■□□□□ 0.88
CD4-202ENST00000437800 RIMS2Q9UQ26 1411 aa20.52■□□□□ 0.88
CD4-202ENST00000437800 HSPA5P11021 654 aaKnown RBP20.51■□□□□ 0.87
CD4-202ENST00000437800 SENP3Q9H4L4 574 aaPredicted RBP20.51■□□□□ 0.87
CD4-202ENST00000437800 EIF4G2P78344 907 aaKnown RBP eCLIP20.51■□□□□ 0.87
CD4-202ENST00000437800 PIK3C2GO75747 1445 aa20.51■□□□□ 0.87
CD4-202ENST00000437800 KIAA1210Q9ULL0 1709 aa20.49■□□□□ 0.87
CD4-202ENST00000437800 TMEM2Q9UHN6 1383 aa20.49■□□□□ 0.87
CD4-202ENST00000437800 ROCK2O75116 1388 aaKnown RBP20.47■□□□□ 0.87
CD4-202ENST00000437800 SLIT1O75093 1534 aa20.46■□□□□ 0.87
CD4-202ENST00000437800 NBPF1Q3BBV0 1214 aa20.46■□□□□ 0.87
CD4-202ENST00000437800 STAC3Q96MF2 364 aa20.46■□□□□ 0.87
CD4-202ENST00000437800 IQGAP1P46940 1657 aa20.45■□□□□ 0.86
CD4-202ENST00000437800 ARHGAP23Q9P227 1491 aa20.45■□□□□ 0.86
CD4-202ENST00000437800 VGFO15240 615 aaPredicted RBP20.45■□□□□ 0.86
CD4-202ENST00000437800 ANP32CO43423 234 aa20.45■□□□□ 0.86
CD4-202ENST00000437800 LAMC1P11047 1609 aa20.44■□□□□ 0.86
CD4-202ENST00000437800 NRXN3Q9Y4C0 1643 aa20.44■□□□□ 0.86
CD4-202ENST00000437800 CFAP70Q5T0N1 1121 aa20.44■□□□□ 0.86
CD4-202ENST00000437800 GPRASP1Q5JY77 1395 aa20.42■□□□□ 0.86
CD4-202ENST00000437800 CARD11Q9BXL7 1154 aa20.42■□□□□ 0.86
CD4-202ENST00000437800 SETD1AO15047 1707 aaKnown RBP20.41■□□□□ 0.86
CD4-202ENST00000437800 ASXL1Q8IXJ9 1541 aa20.41■□□□□ 0.86
CD4-202ENST00000437800 THEMISQ8N1K5 641 aaPredicted RBP20.41■□□□□ 0.86
CD4-202ENST00000437800 LTKP29376 864 aa20.4■□□□□ 0.86
CD4-202ENST00000437800 WASHC2AQ641Q2 1341 aa20.4■□□□□ 0.86
CD4-202ENST00000437800 USP47Q96K76 1375 aa20.4■□□□□ 0.86
CD4-202ENST00000437800 ADGRB1O14514 1584 aa20.4■□□□□ 0.86
CD4-202ENST00000437800 ALKQ9UM73 1620 aa20.39■□□□□ 0.86
CD4-202ENST00000437800 SETBP1Q9Y6X0 1596 aa20.39■□□□□ 0.85
CD4-202ENST00000437800 SCAF11Q99590 1463 aaKnown RBP20.38■□□□□ 0.85
CD4-202ENST00000437800 C11orf95C9JLR9 678 aaPredicted RBP20.38■□□□□ 0.85
CD4-202ENST00000437800 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.38■□□□□ 0.85
CD4-202ENST00000437800 TXNDC2Q86VQ3 553 aa20.36■□□□□ 0.85
CD4-202ENST00000437800 C14orf93Q9H972 538 aaKnown RBP20.36■□□□□ 0.85
CD4-202ENST00000437800 POLR1AO95602 1720 aaPredicted RBP20.36■□□□□ 0.85
CD4-202ENST00000437800 PLEKHG1Q9ULL1 1385 aa20.35■□□□□ 0.85
CD4-202ENST00000437800 TMEM132EQ6IEE7 984 aa20.34■□□□□ 0.85
CD4-202ENST00000437800 EID1Q9Y6B2 187 aa20.34■□□□□ 0.85
CD4-202ENST00000437800 LMTK3Q96Q04 1460 aa20.34■□□□□ 0.85
CD4-202ENST00000437800 HDGFP51858 240 aaKnown RBP20.33■□□□□ 0.84
CD4-202ENST00000437800 ADAMTS13Q76LX8 1427 aa20.32■□□□□ 0.84
CD4-202ENST00000437800 BCANQ96GW7 911 aa20.32■□□□□ 0.84
CD4-202ENST00000437800 CCDC7Q96M83 1385 aa20.31■□□□□ 0.84
CD4-202ENST00000437800 ARHGEF28Q8N1W1 1705 aaKnown RBP20.3■□□□□ 0.84
CD4-202ENST00000437800 HSPA2P54652 639 aa20.29■□□□□ 0.84
CD4-202ENST00000437800 METP08581 1390 aa20.28■□□□□ 0.84
CD4-202ENST00000437800 KIF7Q2M1P5 1343 aa20.28■□□□□ 0.84
CD4-202ENST00000437800 ST20-MTHFSA0A0A6YYL1 179 aa20.27■□□□□ 0.84
CD4-202ENST00000437800 ANKLE2Q86XL3 938 aa20.27■□□□□ 0.84
CD4-202ENST00000437800 MED14O60244 1454 aa20.26■□□□□ 0.83
CD4-202ENST00000437800 SLC26A8Q96RN1 970 aa20.26■□□□□ 0.83
CD4-202ENST00000437800 YTHDC2Q9H6S0 1430 aaKnown RBP20.26■□□□□ 0.83
CD4-202ENST00000437800 DIP2AQ14689 1571 aa20.26■□□□□ 0.83
CD4-202ENST00000437800 TRAK1Q9UPV9 953 aa20.25■□□□□ 0.83
CD4-202ENST00000437800 STK26Q9P289 416 aa20.24■□□□□ 0.83
CD4-202ENST00000437800 NCKAP5LQ9HCH0 1330 aa20.24■□□□□ 0.83
CD4-202ENST00000437800 QRICH2Q9H0J4 1663 aa20.24■□□□□ 0.83
CD4-202ENST00000437800 EIF3AQ14152 1382 aaKnown RBP20.23■□□□□ 0.83
CD4-202ENST00000437800 NPHP4O75161 1426 aaPredicted RBP20.23■□□□□ 0.83
CD4-202ENST00000437800 KNDC1Q76NI1 1749 aa20.22■□□□□ 0.83
CD4-202ENST00000437800 LRPPRCP42704 1394 aaKnown RBP20.2■□□□□ 0.82
CD4-202ENST00000437800 STRCQ7RTU9 1775 aa20.2■□□□□ 0.82
CD4-202ENST00000437800 PTPRUQ92729 1446 aa20.19■□□□□ 0.82
CD4-202ENST00000437800 TESK2Q96S53 571 aa20.18■□□□□ 0.82
CD4-202ENST00000437800 CPS1P31327 1500 aa20.18■□□□□ 0.82
CD4-202ENST00000437800 RBM19Q9Y4C8 960 aaKnown RBP20.18■□□□□ 0.82
CD4-202ENST00000437800 XRN1Q8IZH2 1706 aaKnown RBP20.17■□□□□ 0.82
CD4-202ENST00000437800 DLC1Q96QB1 1528 aa20.17■□□□□ 0.82
CD4-202ENST00000437800 CENPJQ9HC77 1338 aaPredicted RBP20.17■□□□□ 0.82
CD4-202ENST00000437800 NEFLP07196 543 aa20.17■□□□□ 0.82
CD4-202ENST00000437800 DISP3Q9P2K9 1392 aa20.16■□□□□ 0.82
CD4-202ENST00000437800 TBX22Q9Y458 520 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms